RNA–Protein interactions for RNA: ENST00000368453.8

SHC1-205, Transcript of SHC adaptor protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHC1, Length 3,062 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-205ENST00000368453 GTF2A1P52655 376 aaPredicted RBP17.44■□□□□ 0.38
SHC1-205ENST00000368453 GNG11P61952 73 aa17.44■□□□□ 0.38
SHC1-205ENST00000368453 NEK1Q96PY6 1258 aa17.44■□□□□ 0.38
SHC1-205ENST00000368453 MAP3K5Q99683 1374 aa17.43■□□□□ 0.38
SHC1-205ENST00000368453 CHD1O14646 1710 aa17.43■□□□□ 0.38
SHC1-205ENST00000368453 ZNF589Q86UQ0 364 aaPredicted RBP17.43■□□□□ 0.38
SHC1-205ENST00000368453 PDILTQ8N807 584 aa17.43■□□□□ 0.38
SHC1-205ENST00000368453 ABCA9Q8IUA7 1624 aa17.43■□□□□ 0.38
SHC1-205ENST00000368453 MCM6Q14566 821 aa17.43■□□□□ 0.38
SHC1-205ENST00000368453 CFAP100Q494V2 611 aa17.43■□□□□ 0.38
SHC1-205ENST00000368453 HSP90AA4PQ58FG1 418 aa17.43■□□□□ 0.38
SHC1-205ENST00000368453 LEKR1Q6ZMV7 388 aa17.43■□□□□ 0.38
SHC1-205ENST00000368453 ARAP3Q8WWN8 1544 aa17.42■□□□□ 0.38
SHC1-205ENST00000368453 GNAT3A8MTJ3 354 aa17.42■□□□□ 0.38
SHC1-205ENST00000368453 TBC1D8O95759 1140 aa17.42■□□□□ 0.38
SHC1-205ENST00000368453 CC2D1AQ6P1N0 951 aaPredicted RBP17.42■□□□□ 0.38
SHC1-205ENST00000368453 NFATC2IPQ8NCF5 419 aa17.42■□□□□ 0.38
SHC1-205ENST00000368453 DNAAF4Q8WXU2 420 aa17.42■□□□□ 0.38
SHC1-205ENST00000368453 ZNF396Q96N95 335 aaPredicted RBP17.42■□□□□ 0.38
SHC1-205ENST00000368453 CPS1P31327 1500 aa17.42■□□□□ 0.38
SHC1-205ENST00000368453 TADA3O75528 432 aa17.42■□□□□ 0.38
SHC1-205ENST00000368453 SEC62Q99442 399 aaKnown RBP17.42■□□□□ 0.38
SHC1-205ENST00000368453 ADAM21Q9UKJ8 722 aa17.42■□□□□ 0.38
SHC1-205ENST00000368453 RCOR1Q9UKL0 485 aa17.42■□□□□ 0.38
SHC1-205ENST00000368453 EFCAB8A8MWE9 144 aa17.41■□□□□ 0.38
SHC1-205ENST00000368453 HIP1O00291 1037 aa17.41■□□□□ 0.38
SHC1-205ENST00000368453 CASQ1P31415 396 aa17.41■□□□□ 0.38
SHC1-205ENST00000368453 G3BP1Q13283 466 aaKnown RBP eCLIP17.41■□□□□ 0.38
SHC1-205ENST00000368453 LRRFIP1Q32MZ4 808 aaKnown RBP17.41■□□□□ 0.38
SHC1-205ENST00000368453 GOLGA6L1Q8N7Z2 621 aa17.41■□□□□ 0.38
SHC1-205ENST00000368453 KCNB2Q92953 911 aa17.41■□□□□ 0.38
SHC1-205ENST00000368453 RRP15Q9Y3B9 282 aaKnown RBP17.41■□□□□ 0.38
SHC1-205ENST00000368453 TPM1P09493 284 aa17.41■□□□□ 0.38
SHC1-205ENST00000368453 NUTM2GQ5VZR2 741 aa17.41■□□□□ 0.38
SHC1-205ENST00000368453 VPS18Q9P253 973 aa17.41■□□□□ 0.38
SHC1-205ENST00000368453 NDUFB9Q9Y6M9 179 aa17.41■□□□□ 0.38
SHC1-205ENST00000368453 ANKRD65E5RJM6 399 aa17.41■□□□□ 0.38
SHC1-205ENST00000368453 CCP110O43303 1012 aa17.41■□□□□ 0.38
SHC1-205ENST00000368453 DHX16O60231 1041 aaKnown RBP17.41■□□□□ 0.38
SHC1-205ENST00000368453 ATP1A3P13637 1013 aa17.41■□□□□ 0.38
SHC1-205ENST00000368453 STK38Q15208 465 aa17.41■□□□□ 0.38
SHC1-205ENST00000368453 MUM1L1Q5H9M0 696 aa17.41■□□□□ 0.38
SHC1-205ENST00000368453 CCDC158Q5M9N0 1113 aa17.41■□□□□ 0.38
SHC1-205ENST00000368453 MRPS27Q92552 414 aaKnown RBP17.41■□□□□ 0.38
SHC1-205ENST00000368453 CHPF2Q9P2E5 772 aa17.41■□□□□ 0.38
SHC1-205ENST00000368453 POLR3DP05423 398 aaPredicted RBP17.4■□□□□ 0.38
SHC1-205ENST00000368453 NPM1P06748 294 aaKnown RBP eCLIP17.4■□□□□ 0.38
SHC1-205ENST00000368453 SCRN1Q12765 414 aa17.4■□□□□ 0.38
SHC1-205ENST00000368453 EYA1Q99502 592 aa17.4■□□□□ 0.38
SHC1-205ENST00000368453 NCOA5Q9HCD5 579 aaKnown RBP17.4■□□□□ 0.38
SHC1-205ENST00000368453 TLR7Q9NYK1 1049 aaKnown RBP17.4■□□□□ 0.38
SHC1-205ENST00000368453 ADCY9O60503 1353 aa17.4■□□□□ 0.38
SHC1-205ENST00000368453 FRMPD1Q5SYB0 1578 aa17.4■□□□□ 0.38
SHC1-205ENST00000368453 SLC3A2P08195 630 aaKnown RBP17.4■□□□□ 0.38
SHC1-205ENST00000368453 FANCCQ00597 558 aa17.4■□□□□ 0.38
SHC1-205ENST00000368453 CCDC129Q6ZRS4 1044 aa17.4■□□□□ 0.38
SHC1-205ENST00000368453 SRRTQ9BXP5 876 aaKnown RBP17.4■□□□□ 0.38
SHC1-205ENST00000368453 GIGYF1O75420 1035 aaPredicted RBP17.39■□□□□ 0.38
SHC1-205ENST00000368453 NDUFA8P51970 172 aa17.39■□□□□ 0.38
SHC1-205ENST00000368453 UBASH3AP57075 661 aa17.39■□□□□ 0.38
SHC1-205ENST00000368453 EAF2Q96CJ1 260 aaPredicted RBP17.39■□□□□ 0.38
SHC1-205ENST00000368453 PARD6BQ9BYG5 372 aa17.39■□□□□ 0.38
SHC1-205ENST00000368453 EFCC1Q9HA90 598 aa17.39■□□□□ 0.38
SHC1-205ENST00000368453 ARHGEF10O15013 1369 aa17.39■□□□□ 0.37
SHC1-205ENST00000368453 PPP2R3AQ06190 1150 aa17.39■□□□□ 0.37
SHC1-205ENST00000368453 TEFQ10587 303 aa17.39■□□□□ 0.37
SHC1-205ENST00000368453 KIAA1468Q9P260 1216 aa17.39■□□□□ 0.37
SHC1-205ENST00000368453 PCDHA7Q9UN72 937 aa17.39■□□□□ 0.37
SHC1-205ENST00000368453 PTPDC1A2A3K4 754 aa17.39■□□□□ 0.37
SHC1-205ENST00000368453 APOBRQ0VD83 1088 aa17.39■□□□□ 0.37
SHC1-205ENST00000368453 OTUD7BQ6GQQ9 843 aa17.39■□□□□ 0.37
SHC1-205ENST00000368453 PHLPP2Q6ZVD8 1323 aa17.38■□□□□ 0.37
SHC1-205ENST00000368453 IL17REQ8NFR9 667 aa17.38■□□□□ 0.37
SHC1-205ENST00000368453 FBXO18Q8NFZ0 1043 aa17.38■□□□□ 0.37
SHC1-205ENST00000368453 GOLGA5Q8TBA6 731 aa17.38■□□□□ 0.37
SHC1-205ENST00000368453 TUBGCP6Q96RT7 1819 aa17.38■□□□□ 0.37
SHC1-205ENST00000368453 PHACTR2O75167 634 aa17.38■□□□□ 0.37
SHC1-205ENST00000368453 ADD1P35611 737 aaKnown RBP17.38■□□□□ 0.37
SHC1-205ENST00000368453 ENGASEQ8NFI3 743 aa17.38■□□□□ 0.37
SHC1-205ENST00000368453 CHGBP05060 677 aa17.37■□□□□ 0.37
SHC1-205ENST00000368453 TOP1P11387 765 aaKnown RBP17.37■□□□□ 0.37
SHC1-205ENST00000368453 TRIM65Q6PJ69 517 aa17.37■□□□□ 0.37
SHC1-205ENST00000368453 CHST3Q7LGC8 479 aa17.37■□□□□ 0.37
SHC1-205ENST00000368453 SRLQ86TD4 932 aa17.37■□□□□ 0.37
SHC1-205ENST00000368453 ERC1Q8IUD2 1116 aa17.37■□□□□ 0.37
SHC1-205ENST00000368453 PARP3Q9Y6F1 533 aa17.37■□□□□ 0.37
SHC1-205ENST00000368453 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.37■□□□□ 0.37
SHC1-205ENST00000368453 TUBB4AP04350 444 aa17.37■□□□□ 0.37
SHC1-205ENST00000368453 NOM1Q5C9Z4 860 aaKnown RBP17.37■□□□□ 0.37
SHC1-205ENST00000368453 REXO1L1PQ8IX06 675 aa17.37■□□□□ 0.37
SHC1-205ENST00000368453 KLHDC4Q8TBB5 520 aa17.37■□□□□ 0.37
SHC1-205ENST00000368453 KCND1Q9NSA2 647 aa17.37■□□□□ 0.37
SHC1-205ENST00000368453 ZSCAN12O43309 604 aa17.36■□□□□ 0.37
SHC1-205ENST00000368453 KRT32Q14532 448 aa17.36■□□□□ 0.37
SHC1-205ENST00000368453 KARSQ15046 597 aaKnown RBP17.36■□□□□ 0.37
SHC1-205ENST00000368453 CWF19L2Q2TBE0 894 aaKnown RBP17.36■□□□□ 0.37
SHC1-205ENST00000368453 BEND3Q5T5X7 828 aa17.36■□□□□ 0.37
SHC1-205ENST00000368453 GPR161Q8N6U8 529 aaKnown RBP17.36■□□□□ 0.37
SHC1-205ENST00000368453 HMG20BQ9P0W2 317 aa17.36■□□□□ 0.37
SHC1-205ENST00000368453 MLECQ14165 292 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms