RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 PI4K2BQ8TCG2 481 aa17.52■□□□□ 0.39
UBAP1-202ENST00000359544 DDX54Q8TDD1 881 aaKnown RBP17.52■□□□□ 0.39
UBAP1-202ENST00000359544 DISP2A7MBM2 1401 aa17.51■□□□□ 0.39
UBAP1-202ENST00000359544 TRIM37O94972 964 aa17.51■□□□□ 0.39
UBAP1-202ENST00000359544 TEX35Q5T0J7 233 aa17.51■□□□□ 0.39
UBAP1-202ENST00000359544 NUTM1Q86Y26 1132 aa17.51■□□□□ 0.39
UBAP1-202ENST00000359544 CCAR2Q8N163 923 aaKnown RBP17.51■□□□□ 0.39
UBAP1-202ENST00000359544 ZNF446Q9NWS9 450 aa17.51■□□□□ 0.39
UBAP1-202ENST00000359544 EXOC5O00471 708 aa17.51■□□□□ 0.39
UBAP1-202ENST00000359544 CDC37L1Q7L3B6 337 aa17.51■□□□□ 0.39
UBAP1-202ENST00000359544 DEFB132Q7Z7B7 95 aa17.51■□□□□ 0.39
UBAP1-202ENST00000359544 IL1RAPL2Q9NP60 686 aa17.51■□□□□ 0.39
UBAP1-202ENST00000359544 CPA1P15085 419 aa17.5■□□□□ 0.39
UBAP1-202ENST00000359544 ME3Q16798 604 aa17.5■□□□□ 0.39
UBAP1-202ENST00000359544 SULT6B1Q6IMI4 303 aa17.5■□□□□ 0.39
UBAP1-202ENST00000359544 LRRFIP2Q9Y608 721 aaKnown RBP17.5■□□□□ 0.39
UBAP1-202ENST00000359544 MEGF6O75095 1541 aa17.5■□□□□ 0.39
UBAP1-202ENST00000359544 CCDC69A6NI79 296 aa17.5■□□□□ 0.39
UBAP1-202ENST00000359544 MAP4K4O95819 1239 aaPredicted RBP17.5■□□□□ 0.39
UBAP1-202ENST00000359544 KCNB2Q92953 911 aa17.5■□□□□ 0.39
UBAP1-202ENST00000359544 ST7Q9NRC1 585 aa17.5■□□□□ 0.39
UBAP1-202ENST00000359544 LRRC37A3O60309 1634 aa17.5■□□□□ 0.39
UBAP1-202ENST00000359544 N4BP2Q86UW6 1770 aaPredicted RBP17.49■□□□□ 0.39
UBAP1-202ENST00000359544 TUBB4AP04350 444 aa17.49■□□□□ 0.39
UBAP1-202ENST00000359544 ST3GAL1Q11201 340 aa17.49■□□□□ 0.39
UBAP1-202ENST00000359544 CWC27Q6UX04 472 aaKnown RBP17.49■□□□□ 0.39
UBAP1-202ENST00000359544 BICD2Q8TD16 824 aa17.49■□□□□ 0.39
UBAP1-202ENST00000359544 LEO1Q8WVC0 666 aaPredicted RBP17.49■□□□□ 0.39
UBAP1-202ENST00000359544 HNRNPH2P55795 449 aaKnown RBP17.49■□□□□ 0.39
UBAP1-202ENST00000359544 GSDMDP57764 484 aa17.49■□□□□ 0.39
UBAP1-202ENST00000359544 CCZ1BP86790 482 aa17.49■□□□□ 0.39
UBAP1-202ENST00000359544 CCZ1P86791 482 aaPredicted RBP17.49■□□□□ 0.39
UBAP1-202ENST00000359544 SSH3Q8TE77 659 aa17.49■□□□□ 0.39
UBAP1-202ENST00000359544 L2HGDHQ9H9P8 463 aa17.49■□□□□ 0.39
UBAP1-202ENST00000359544 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.49■□□□□ 0.39
UBAP1-202ENST00000359544 IQCB1Q15051 598 aa17.48■□□□□ 0.39
UBAP1-202ENST00000359544 FERMT3Q86UX7 667 aa17.48■□□□□ 0.39
UBAP1-202ENST00000359544 TSPYL4Q9UJ04 414 aa17.48■□□□□ 0.39
UBAP1-202ENST00000359544 SPG7Q9UQ90 795 aa17.48■□□□□ 0.39
UBAP1-202ENST00000359544 PXDNLA1KZ92 1463 aa17.48■□□□□ 0.39
UBAP1-202ENST00000359544 NR1I2O75469 434 aa17.48■□□□□ 0.39
UBAP1-202ENST00000359544 ZKSCAN1P17029 563 aaPredicted RBP17.48■□□□□ 0.39
UBAP1-202ENST00000359544 TPM4P67936 248 aa17.48■□□□□ 0.39
UBAP1-202ENST00000359544 ACSBG1Q96GR2 724 aa17.48■□□□□ 0.39
UBAP1-202ENST00000359544 ARGLU1Q9NWB6 273 aaPredicted RBP17.48■□□□□ 0.39
UBAP1-202ENST00000359544 FHOD1Q9Y613 1164 aa17.48■□□□□ 0.39
UBAP1-202ENST00000359544 FAM208AQ9UK61 1670 aaKnown RBP17.47■□□□□ 0.39
UBAP1-202ENST00000359544 FLIIQ13045 1269 aa17.47■□□□□ 0.39
UBAP1-202ENST00000359544 TXLNBQ8N3L3 684 aa17.47■□□□□ 0.39
UBAP1-202ENST00000359544 TRMT1Q9NXH9 659 aaKnown RBP17.47■□□□□ 0.39
UBAP1-202ENST00000359544 CTAGE5O15320 804 aa17.47■□□□□ 0.39
UBAP1-202ENST00000359544 UBTFL1P0CB47 393 aaPredicted RBP17.47■□□□□ 0.39
UBAP1-202ENST00000359544 SNW1Q13573 536 aaKnown RBP17.47■□□□□ 0.39
UBAP1-202ENST00000359544 STX1AQ16623 288 aa17.47■□□□□ 0.39
UBAP1-202ENST00000359544 PRPF40BQ6NWY9 871 aaKnown RBP17.47■□□□□ 0.39
UBAP1-202ENST00000359544 FILIP1Q7Z7B0 1213 aa17.47■□□□□ 0.39
UBAP1-202ENST00000359544 NECAB1Q8N987 351 aa17.47■□□□□ 0.39
UBAP1-202ENST00000359544 RHPN1Q8TCX5 695 aa17.47■□□□□ 0.39
UBAP1-202ENST00000359544 MAP3K5Q99683 1374 aa17.46■□□□□ 0.39
UBAP1-202ENST00000359544 ADCK5Q3MIX3 580 aa17.46■□□□□ 0.39
UBAP1-202ENST00000359544 RAPGEF4Q8WZA2 1011 aa17.46■□□□□ 0.39
UBAP1-202ENST00000359544 TRIM34Q9BYJ4 488 aa17.46■□□□□ 0.39
UBAP1-202ENST00000359544 FEZ2Q9UHY8 353 aaPredicted RBP17.46■□□□□ 0.39
UBAP1-202ENST00000359544 PARP4Q9UKK3 1724 aaKnown RBP17.46■□□□□ 0.39
UBAP1-202ENST00000359544 WNK3Q9BYP7 1800 aa17.46■□□□□ 0.39
UBAP1-202ENST00000359544 KCNQ2O43526 872 aa17.46■□□□□ 0.38
UBAP1-202ENST00000359544 GIGYF1O75420 1035 aaPredicted RBP17.46■□□□□ 0.38
UBAP1-202ENST00000359544 ARID5BQ14865 1188 aa17.46■□□□□ 0.38
UBAP1-202ENST00000359544 ANKRD1Q15327 319 aa17.46■□□□□ 0.38
UBAP1-202ENST00000359544 FAM173BQ6P4H8 233 aa17.46■□□□□ 0.38
UBAP1-202ENST00000359544 GTF3C6Q969F1 213 aa17.46■□□□□ 0.38
UBAP1-202ENST00000359544 BECN2A8MW95 431 aa17.45■□□□□ 0.38
UBAP1-202ENST00000359544 SURF6O75683 361 aaKnown RBP17.45■□□□□ 0.38
UBAP1-202ENST00000359544 PNMA6AP0CW24 399 aaPredicted RBP17.45■□□□□ 0.38
UBAP1-202ENST00000359544 PSMA5P28066 241 aa17.45■□□□□ 0.38
UBAP1-202ENST00000359544 CLCN6P51797 869 aa17.45■□□□□ 0.38
UBAP1-202ENST00000359544 CCDC30Q5VVM6 783 aa17.45■□□□□ 0.38
UBAP1-202ENST00000359544 TTC41PQ6P2S7 1318 aa17.45■□□□□ 0.38
UBAP1-202ENST00000359544 RAD51AP2Q09MP3 1159 aa17.45■□□□□ 0.38
UBAP1-202ENST00000359544 DHX8Q14562 1220 aaKnown RBP17.45■□□□□ 0.38
UBAP1-202ENST00000359544 ERCC6LQ2NKX8 1250 aa17.45■□□□□ 0.38
UBAP1-202ENST00000359544 MUM1L1Q5H9M0 696 aa17.45■□□□□ 0.38
UBAP1-202ENST00000359544 FAM196AQ6ZSG2 479 aa17.45■□□□□ 0.38
UBAP1-202ENST00000359544 PLCD3Q8N3E9 789 aa17.45■□□□□ 0.38
UBAP1-202ENST00000359544 CDCA7Q9BWT1 371 aaPredicted RBP17.45■□□□□ 0.38
UBAP1-202ENST00000359544 TPCN1Q9ULQ1 816 aa17.45■□□□□ 0.38
UBAP1-202ENST00000359544 USP42Q9H9J4 1324 aaKnown RBP17.44■□□□□ 0.38
UBAP1-202ENST00000359544 GLRX3O76003 335 aaKnown RBP17.44■□□□□ 0.38
UBAP1-202ENST00000359544 IMPACTQ9P2X3 320 aa17.44■□□□□ 0.38
UBAP1-202ENST00000359544 TFIP11Q9UBB9 837 aaKnown RBP17.44■□□□□ 0.38
UBAP1-202ENST00000359544 POLA2Q14181 598 aa17.44■□□□□ 0.38
UBAP1-202ENST00000359544 ZCRB1Q8TBF4 217 aaKnown RBP17.44■□□□□ 0.38
UBAP1-202ENST00000359544 ATP8B1O43520 1251 aa17.43■□□□□ 0.38
UBAP1-202ENST00000359544 TATP17735 454 aaPredicted RBP17.43■□□□□ 0.38
UBAP1-202ENST00000359544 PTH1RQ03431 593 aa17.43■□□□□ 0.38
UBAP1-202ENST00000359544 EN1Q05925 392 aaPredicted RBP17.43■□□□□ 0.38
UBAP1-202ENST00000359544 CCDC93Q567U6 631 aa17.43■□□□□ 0.38
UBAP1-202ENST00000359544 TMCO3Q6UWJ1 677 aa17.43■□□□□ 0.38
UBAP1-202ENST00000359544 TNS2Q63HR2 1409 aa17.43■□□□□ 0.38
UBAP1-202ENST00000359544 PSDA5PKW4 1024 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms