RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 FOXO4P98177 505 aa18.06■□□□□ 0.48
PTBP1-203ENST00000356948 PI16Q6UXB8 463 aa18.06■□□□□ 0.48
PTBP1-203ENST00000356948 C1orf167Q5SNV9 1468 aa18.06■□□□□ 0.48
PTBP1-203ENST00000356948 SLIT3O75094 1523 aa18.06■□□□□ 0.48
PTBP1-203ENST00000356948 PTGS1P23219 599 aa18.06■□□□□ 0.48
PTBP1-203ENST00000356948 TYRO3Q06418 890 aa18.06■□□□□ 0.48
PTBP1-203ENST00000356948 ATG9AQ7Z3C6 839 aa18.06■□□□□ 0.48
PTBP1-203ENST00000356948 CTDNEP1O95476 244 aa18.05■□□□□ 0.48
PTBP1-203ENST00000356948 SIPA1L3O60292 1781 aaPredicted RBP18.05■□□□□ 0.48
PTBP1-203ENST00000356948 HAND2P61296 217 aa18.05■□□□□ 0.48
PTBP1-203ENST00000356948 NUP62CLQ9H1M0 184 aa18.05■□□□□ 0.48
PTBP1-203ENST00000356948 FGD1P98174 961 aa18.05■□□□□ 0.48
PTBP1-203ENST00000356948 RNF20Q5VTR2 975 aa18.05■□□□□ 0.48
PTBP1-203ENST00000356948 NKX2-3Q8TAU0 364 aa18.05■□□□□ 0.48
PTBP1-203ENST00000356948 GTF3C6Q969F1 213 aa18.05■□□□□ 0.48
PTBP1-203ENST00000356948 MAP7D2Q96T17 732 aa18.05■□□□□ 0.48
PTBP1-203ENST00000356948 DNAJC25Q9H1X3 360 aa18.05■□□□□ 0.48
PTBP1-203ENST00000356948 DENND2AQ9ULE3 1009 aa18.04■□□□□ 0.48
PTBP1-203ENST00000356948 FAM184AQ8NB25 1140 aa18.04■□□□□ 0.48
PTBP1-203ENST00000356948 BICD2Q8TD16 824 aa18.04■□□□□ 0.48
PTBP1-203ENST00000356948 PIBF1Q8WXW3 757 aa18.04■□□□□ 0.48
PTBP1-203ENST00000356948 TNMDQ9H2S6 317 aa18.04■□□□□ 0.48
PTBP1-203ENST00000356948 CBX8Q9HC52 389 aa18.04■□□□□ 0.48
PTBP1-203ENST00000356948 FMNL2Q96PY5 1086 aa18.03■□□□□ 0.48
PTBP1-203ENST00000356948 PDE4CQ08493 712 aa18.03■□□□□ 0.48
PTBP1-203ENST00000356948 MCMDC2Q4G0Z9 681 aa18.03■□□□□ 0.48
PTBP1-203ENST00000356948 USPL1Q5W0Q7 1092 aa18.03■□□□□ 0.48
PTBP1-203ENST00000356948 CHMP4AQ9BY43 222 aa18.03■□□□□ 0.48
PTBP1-203ENST00000356948 HIP1O00291 1037 aa18.02■□□□□ 0.48
PTBP1-203ENST00000356948 ADORA1P30542 326 aa18.02■□□□□ 0.48
PTBP1-203ENST00000356948 MAP3K11Q16584 847 aa18.02■□□□□ 0.48
PTBP1-203ENST00000356948 RABL6Q3YEC7 729 aaPredicted RBP18.02■□□□□ 0.48
PTBP1-203ENST00000356948 HAUS7Q99871 368 aa18.02■□□□□ 0.48
PTBP1-203ENST00000356948 GOLGA6L4A6NEF3 574 aa18.02■□□□□ 0.48
PTBP1-203ENST00000356948 ARID5BQ14865 1188 aa18.02■□□□□ 0.48
PTBP1-203ENST00000356948 UVSSAQ2YD98 709 aa18.02■□□□□ 0.48
PTBP1-203ENST00000356948 C19orf44Q9H6X5 657 aa18.02■□□□□ 0.48
PTBP1-203ENST00000356948 CCDC192P0DO97 292 aa18.02■□□□□ 0.47
PTBP1-203ENST00000356948 FKBP4Q02790 459 aaKnown RBP eCLIP18.02■□□□□ 0.472e-6■■■□□ 19
PTBP1-203ENST00000356948 MCM5P33992 734 aa18.01■□□□□ 0.47
PTBP1-203ENST00000356948 RESTQ13127 1097 aa18.01■□□□□ 0.47
PTBP1-203ENST00000356948 SCARF1Q14162 830 aa18.01■□□□□ 0.47
PTBP1-203ENST00000356948 SASS6Q6UVJ0 657 aa18.01■□□□□ 0.47
PTBP1-203ENST00000356948 H3BQV1 296 aa18.01■□□□□ 0.47
PTBP1-203ENST00000356948 M0R2C6 588 aa18.01■□□□□ 0.47
PTBP1-203ENST00000356948 IFFO2Q5TF58 517 aa18.01■□□□□ 0.47
PTBP1-203ENST00000356948 DCAF5Q96JK2 942 aa18.01■□□□□ 0.47
PTBP1-203ENST00000356948 GOLPH3LQ9H4A5 285 aa18.01■□□□□ 0.47
PTBP1-203ENST00000356948 GOLGB1Q14789 3259 aaKnown RBP18.01■□□□□ 0.47
PTBP1-203ENST00000356948 ZNF710Q8N1W2 664 aa18■□□□□ 0.47
PTBP1-203ENST00000356948 PAG1Q9NWQ8 432 aa18■□□□□ 0.47
PTBP1-203ENST00000356948 TRPM3Q9HCF6 1732 aaPredicted RBP18■□□□□ 0.47
PTBP1-203ENST00000356948 VGLL3A8MV65 326 aa18■□□□□ 0.47
PTBP1-203ENST00000356948 PHRF1Q9P1Y6 1649 aaKnown RBP17.99■□□□□ 0.47
PTBP1-203ENST00000356948 ADD1P35611 737 aaKnown RBP17.99■□□□□ 0.47
PTBP1-203ENST00000356948 ZNF771Q7L3S4 317 aaPredicted RBP17.99■□□□□ 0.47
PTBP1-203ENST00000356948 CCDC186Q7Z3E2 898 aa17.99■□□□□ 0.47
PTBP1-203ENST00000356948 KBTBD3Q8NAB2 608 aa17.99■□□□□ 0.47
PTBP1-203ENST00000356948 JCADQ9P266 1359 aa17.99■□□□□ 0.47
PTBP1-203ENST00000356948 LETM1O95202 739 aaPredicted RBP17.99■□□□□ 0.47
PTBP1-203ENST00000356948 ATF3P18847 181 aa17.99■□□□□ 0.47
PTBP1-203ENST00000356948 CSPP1Q1MSJ5 1256 aa17.99■□□□□ 0.47
PTBP1-203ENST00000356948 C11orf57Q6ZUT1 292 aaPredicted RBP17.99■□□□□ 0.47
PTBP1-203ENST00000356948 NSUN7Q8NE18 718 aaKnown RBP17.99■□□□□ 0.47
PTBP1-203ENST00000356948 HDAC5Q9UQL6 1122 aa17.99■□□□□ 0.47
PTBP1-203ENST00000356948 HSPD1P10809 573 aaKnown RBP17.99■□□□□ 0.47
PTBP1-203ENST00000356948 PLBD2Q8NHP8 589 aa17.99■□□□□ 0.47
PTBP1-203ENST00000356948 OSBP2Q969R2 916 aa17.99■□□□□ 0.47
PTBP1-203ENST00000356948 A0A1B0GUL7 405 aa17.98■□□□□ 0.47
PTBP1-203ENST00000356948 USP28Q96RU2 1077 aa17.98■□□□□ 0.47
PTBP1-203ENST00000356948 TMEM94Q12767 1356 aa17.98■□□□□ 0.47
PTBP1-203ENST00000356948 PTPDC1A2A3K4 754 aa17.98■□□□□ 0.47
PTBP1-203ENST00000356948 ANKRD1Q15327 319 aa17.98■□□□□ 0.47
PTBP1-203ENST00000356948 CCDC144BQ3MJ40 725 aa17.98■□□□□ 0.47
PTBP1-203ENST00000356948 ILDR1Q86SU0 546 aaPredicted RBP17.98■□□□□ 0.47
PTBP1-203ENST00000356948 CCDC144CPQ8IYA2 1237 aa17.98■□□□□ 0.47
PTBP1-203ENST00000356948 PLCD3Q8N3E9 789 aa17.98■□□□□ 0.47
PTBP1-203ENST00000356948 FAM200AQ8TCP9 573 aa17.98■□□□□ 0.47
PTBP1-203ENST00000356948 FAM89AQ96GI7 184 aa17.98■□□□□ 0.47
PTBP1-203ENST00000356948 MAST3O60307 1309 aa17.98■□□□□ 0.47
PTBP1-203ENST00000356948 TSGA10IPQ3SY00 556 aa17.97■□□□□ 0.47
PTBP1-203ENST00000356948 KIAA1524Q8TCG1 905 aa17.97■□□□□ 0.47
PTBP1-203ENST00000356948 E7EWF7 191 aa17.97■□□□□ 0.47
PTBP1-203ENST00000356948 FOXP2O15409 715 aa17.97■□□□□ 0.47
PTBP1-203ENST00000356948 HSPA2P54652 639 aa17.97■□□□□ 0.47
PTBP1-203ENST00000356948 OVOS2A0A0G2JMS6 1433 aa17.97■□□□□ 0.47
PTBP1-203ENST00000356948 SCN11AQ9UI33 1791 aa17.97■□□□□ 0.47
PTBP1-203ENST00000356948 H7C1W4 665 aa17.97■□□□□ 0.47
PTBP1-203ENST00000356948 HMG20BQ9P0W2 317 aa17.97■□□□□ 0.47
PTBP1-203ENST00000356948 PALLDQ8WX93 1383 aa17.97■□□□□ 0.47
PTBP1-203ENST00000356948 AFDNP55196 1824 aaKnown RBP17.96■□□□□ 0.47
PTBP1-203ENST00000356948 PDCP20941 246 aa17.96■□□□□ 0.47
PTBP1-203ENST00000356948 DRC7Q8IY82 874 aa17.96■□□□□ 0.47
PTBP1-203ENST00000356948 STRN4Q9NRL3 753 aa17.96■□□□□ 0.47
PTBP1-203ENST00000356948 NAA30Q147X3 362 aaPredicted RBP17.96■□□□□ 0.47
PTBP1-203ENST00000356948 TRIM5Q9C035 493 aa17.96■□□□□ 0.47
PTBP1-203ENST00000356948 IFIT1P09914 478 aaKnown RBP17.95■□□□□ 0.46
PTBP1-203ENST00000356948 TOM1L2Q6ZVM7 507 aa17.95■□□□□ 0.46
PTBP1-203ENST00000356948 SCAND2PQ9GZW5 306 aaPredicted RBP17.95■□□□□ 0.46
PTBP1-203ENST00000356948 PRDM4Q9UKN5 801 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms