RNA–Protein interactions for RNA: ENST00000345990.8

CSNK1G3-201, Transcript of casein kinase 1 gamma 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSNK1G3, Length 4,635 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-201ENST00000345990 MBD3O95983 291 aa16.13■□□□□ 0.17
CSNK1G3-201ENST00000345990 LIMCH1Q9UPQ0 1083 aa16.13■□□□□ 0.17
CSNK1G3-201ENST00000345990 HLA-DOAP06340 250 aa16.13■□□□□ 0.17
CSNK1G3-201ENST00000345990 ZNF444Q8N0Y2 327 aaPredicted RBP16.13■□□□□ 0.17
CSNK1G3-201ENST00000345990 MAST3O60307 1309 aa16.13■□□□□ 0.17
CSNK1G3-201ENST00000345990 CYP7A1P22680 504 aa16.13■□□□□ 0.17
CSNK1G3-201ENST00000345990 TMTC2Q8N394 836 aa16.13■□□□□ 0.17
CSNK1G3-201ENST00000345990 KRT23Q9C075 422 aa16.13■□□□□ 0.17
CSNK1G3-201ENST00000345990 GGA1Q9UJY5 639 aa16.13■□□□□ 0.17
CSNK1G3-201ENST00000345990 NRXN3Q9Y4C0 1643 aa16.13■□□□□ 0.17
CSNK1G3-201ENST00000345990 TRIM37O94972 964 aa16.12■□□□□ 0.17
CSNK1G3-201ENST00000345990 TRIM28Q13263 835 aaKnown RBP16.12■□□□□ 0.17
CSNK1G3-201ENST00000345990 FOXD4L5Q5VV16 416 aaPredicted RBP16.12■□□□□ 0.17
CSNK1G3-201ENST00000345990 NCOA7Q8NI08 942 aa16.12■□□□□ 0.17
CSNK1G3-201ENST00000345990 FOXD4L4Q8WXT5 416 aaPredicted RBP16.12■□□□□ 0.17
CSNK1G3-201ENST00000345990 MAP2P11137 1827 aaKnown RBP16.12■□□□□ 0.17
CSNK1G3-201ENST00000345990 ATP5JP18859 108 aa16.12■□□□□ 0.17
CSNK1G3-201ENST00000345990 SLC9C2Q5TAH2 1124 aa16.12■□□□□ 0.17
CSNK1G3-201ENST00000345990 RC3H1Q5TC82 1133 aaKnown RBP16.12■□□□□ 0.17
CSNK1G3-201ENST00000345990 CCDC73Q6ZRK6 1079 aa16.12■□□□□ 0.17
CSNK1G3-201ENST00000345990 WDR66Q8TBY9 1149 aa16.12■□□□□ 0.17
CSNK1G3-201ENST00000345990 CRACR2BQ8N4Y2 399 aaPredicted RBP16.12■□□□□ 0.17
CSNK1G3-201ENST00000345990 MYO1BO43795 1136 aa16.12■□□□□ 0.17
CSNK1G3-201ENST00000345990 HIBADHP31937 336 aaKnown RBP16.12■□□□□ 0.17
CSNK1G3-201ENST00000345990 IKQ13123 557 aaPredicted RBP16.11■□□□□ 0.17
CSNK1G3-201ENST00000345990 VPS53Q5VIR6 699 aa16.11■□□□□ 0.17
CSNK1G3-201ENST00000345990 MINDY4BA8MYZ0 360 aa16.11■□□□□ 0.17
CSNK1G3-201ENST00000345990 NLRP10Q86W26 655 aa16.11■□□□□ 0.17
CSNK1G3-201ENST00000345990 GOLGA6L3A6NEY3 463 aa16.11■□□□□ 0.17
CSNK1G3-201ENST00000345990 USPL1Q5W0Q7 1092 aa16.11■□□□□ 0.17
CSNK1G3-201ENST00000345990 C16orf71Q8IYS4 520 aaPredicted RBP16.11■□□□□ 0.17
CSNK1G3-201ENST00000345990 XAGE2Q96GT9 111 aa16.11■□□□□ 0.17
CSNK1G3-201ENST00000345990 CYP19A1P11511 503 aaPredicted RBP16.11■□□□□ 0.17
CSNK1G3-201ENST00000345990 CHMLP26374 656 aa16.11■□□□□ 0.17
CSNK1G3-201ENST00000345990 NEK1Q96PY6 1258 aa16.11■□□□□ 0.17
CSNK1G3-201ENST00000345990 H7C1W4 665 aa16.1■□□□□ 0.17
CSNK1G3-201ENST00000345990 SSFA2P28290 1259 aa16.1■□□□□ 0.17
CSNK1G3-201ENST00000345990 MFSD6Q6ZSS7 791 aa16.1■□□□□ 0.17
CSNK1G3-201ENST00000345990 OGFOD1Q8N543 542 aa16.1■□□□□ 0.17
CSNK1G3-201ENST00000345990 TBC1D22AQ8WUA7 517 aa16.1■□□□□ 0.17
CSNK1G3-201ENST00000345990 MTX1Q13505 466 aa16.1■□□□□ 0.17
CSNK1G3-201ENST00000345990 BICD2Q8TD16 824 aa16.1■□□□□ 0.17
CSNK1G3-201ENST00000345990 NARFQ9UHQ1 456 aa16.1■□□□□ 0.17
CSNK1G3-201ENST00000345990 SOGA3Q5TF21 947 aa16.09■□□□□ 0.17
CSNK1G3-201ENST00000345990 LARP1BQ659C4 914 aaKnown RBP16.09■□□□□ 0.17
CSNK1G3-201ENST00000345990 TCEAL9Q9UHQ7 104 aa16.09■□□□□ 0.17
CSNK1G3-201ENST00000345990 CDHR2Q9BYE9 1310 aa16.09■□□□□ 0.17
CSNK1G3-201ENST00000345990 LDHBP07195 334 aaKnown RBP16.09■□□□□ 0.17
CSNK1G3-201ENST00000345990 MCM5P33992 734 aa16.09■□□□□ 0.17
CSNK1G3-201ENST00000345990 KBTBD3Q8NAB2 608 aa16.09■□□□□ 0.17
CSNK1G3-201ENST00000345990 CTCFLQ8NI51 663 aaPredicted RBP16.09■□□□□ 0.17
CSNK1G3-201ENST00000345990 CNKSR1Q969H4 720 aa16.09■□□□□ 0.17
CSNK1G3-201ENST00000345990 ATP2B4P23634 1241 aa16.09■□□□□ 0.17
CSNK1G3-201ENST00000345990 JDP2Q8WYK2 163 aa16.09■□□□□ 0.17
CSNK1G3-201ENST00000345990 NOL7Q9UMY1 257 aaKnown RBP16.09■□□□□ 0.17
CSNK1G3-201ENST00000345990 PXDNLA1KZ92 1463 aa16.09■□□□□ 0.17
CSNK1G3-201ENST00000345990 LETM1O95202 739 aaPredicted RBP16.08■□□□□ 0.17
CSNK1G3-201ENST00000345990 TSHZ3Q63HK5 1081 aa16.08■□□□□ 0.17
CSNK1G3-201ENST00000345990 DBNDD2Q9BQY9 259 aa16.08■□□□□ 0.17
CSNK1G3-201ENST00000345990 NWD1Q149M9 1564 aa16.08■□□□□ 0.16
CSNK1G3-201ENST00000345990 CCDC171Q6TFL3 1326 aa16.08■□□□□ 0.16
CSNK1G3-201ENST00000345990 MAGEB6P1A0A0J9YX57 407 aa16.08■□□□□ 0.16
CSNK1G3-201ENST00000345990 STAP2Q9UGK3 403 aa16.08■□□□□ 0.16
CSNK1G3-201ENST00000345990 ANKRD26Q9UPS8 1709 aa16.08■□□□□ 0.16
CSNK1G3-201ENST00000345990 NMIQ13287 307 aaPredicted RBP16.08■□□□□ 0.16
CSNK1G3-201ENST00000345990 UBE4AQ14139 1066 aa16.08■□□□□ 0.16
CSNK1G3-201ENST00000345990 COL5A2P05997 1499 aaPredicted RBP16.08■□□□□ 0.16
CSNK1G3-201ENST00000345990 SEMA3EO15041 775 aa16.07■□□□□ 0.16
CSNK1G3-201ENST00000345990 NUP133Q8WUM0 1156 aa16.07■□□□□ 0.16
CSNK1G3-201ENST00000345990 OSBPL3Q9H4L5 887 aa16.07■□□□□ 0.16
CSNK1G3-201ENST00000345990 RBM8AQ9Y5S9 174 aaKnown RBP16.07■□□□□ 0.16
CSNK1G3-201ENST00000345990 MON2Q7Z3U7 1717 aa16.07■□□□□ 0.16
CSNK1G3-201ENST00000345990 UFL1O94874 794 aa16.07■□□□□ 0.16
CSNK1G3-201ENST00000345990 HELBQ8NG08 1087 aaPredicted RBP16.07■□□□□ 0.16
CSNK1G3-201ENST00000345990 APPBP2Q92624 585 aa16.07■□□□□ 0.16
CSNK1G3-201ENST00000345990 PRAMEF22A3QJZ6 481 aa16.07■□□□□ 0.16
CSNK1G3-201ENST00000345990 KIF5BP33176 963 aa16.07■□□□□ 0.16
CSNK1G3-201ENST00000345990 ESR2Q92731 530 aa16.07■□□□□ 0.16
CSNK1G3-201ENST00000345990 TIMM10P62072 90 aa16.07■□□□□ 0.16
CSNK1G3-201ENST00000345990 CFAP45Q9UL16 551 aa16.07■□□□□ 0.16
CSNK1G3-201ENST00000345990 SLC12A7Q9Y666 1083 aa16.07■□□□□ 0.16
CSNK1G3-201ENST00000345990 BBOX1O75936 387 aa16.06■□□□□ 0.16
CSNK1G3-201ENST00000345990 KRT85P78386 507 aa16.06■□□□□ 0.16
CSNK1G3-201ENST00000345990 C8orf34Q49A92 452 aa16.06■□□□□ 0.16
CSNK1G3-201ENST00000345990 CATIPQ7Z7H3 387 aa16.06■□□□□ 0.16
CSNK1G3-201ENST00000345990 SLC4A4Q9Y6R1 1079 aa16.06■□□□□ 0.16
CSNK1G3-201ENST00000345990 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.06■□□□□ 0.16
CSNK1G3-201ENST00000345990 IFIT3O14879 490 aaKnown RBP16.06■□□□□ 0.16
CSNK1G3-201ENST00000345990 POLA2Q14181 598 aa16.06■□□□□ 0.16
CSNK1G3-201ENST00000345990 TMED8Q6PL24 325 aaPredicted RBP16.06■□□□□ 0.16
CSNK1G3-201ENST00000345990 SNX21Q969T3 373 aa16.06■□□□□ 0.16
CSNK1G3-201ENST00000345990 CHD2O14647 1828 aaKnown RBP16.06■□□□□ 0.16
CSNK1G3-201ENST00000345990 TRAF1Q13077 416 aa16.06■□□□□ 0.16
CSNK1G3-201ENST00000345990 LEMD3Q9Y2U8 911 aa16.06■□□□□ 0.16
CSNK1G3-201ENST00000345990 COL15A1P39059 1388 aa16.06■□□□□ 0.16
CSNK1G3-201ENST00000345990 CC2D2BQ6DHV5 1058 aa16.06■□□□□ 0.16
CSNK1G3-201ENST00000345990 DPP8Q6V1X1 898 aaPredicted RBP16.06■□□□□ 0.16
CSNK1G3-201ENST00000345990 UPF3BQ9BZI7 483 aaKnown RBP16.06■□□□□ 0.16
CSNK1G3-201ENST00000345990 ZNF219Q9P2Y4 722 aaPredicted RBP16.06■□□□□ 0.16
CSNK1G3-201ENST00000345990 ATP2B2Q01814 1243 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms