RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 IMPG2Q9BZV3 1241 aa17.37■□□□□ 0.37
COL11A2-201ENST00000341947 C14orf93Q9H972 538 aaKnown RBP17.37■□□□□ 0.37
COL11A2-201ENST00000341947 CKAP4Q07065 602 aaKnown RBP17.36■□□□□ 0.37
COL11A2-201ENST00000341947 C6orf163Q5TEZ5 329 aa17.36■□□□□ 0.37
COL11A2-201ENST00000341947 NCBP1Q09161 790 aaKnown RBP17.36■□□□□ 0.37
COL11A2-201ENST00000341947 CCDC155Q8N6L0 562 aa17.36■□□□□ 0.37
COL11A2-201ENST00000341947 KCNG4Q8TDN1 519 aa17.36■□□□□ 0.37
COL11A2-201ENST00000341947 C6orf50Q9HD87 102 aa17.36■□□□□ 0.37
COL11A2-201ENST00000341947 NIP7Q9Y221 180 aaKnown RBP eCLIP17.36■□□□□ 0.37
COL11A2-201ENST00000341947 CYLC1P35663 651 aaPredicted RBP17.36■□□□□ 0.37
COL11A2-201ENST00000341947 IQSEC3Q9UPP2 1182 aaPredicted RBP17.36■□□□□ 0.37
COL11A2-201ENST00000341947 MRVI1Q9Y6F6 885 aa17.36■□□□□ 0.37
COL11A2-201ENST00000341947 MAGEB6P1A0A0J9YX57 407 aa17.36■□□□□ 0.37
COL11A2-201ENST00000341947 HMGXB3Q12766 1538 aa17.36■□□□□ 0.37
COL11A2-201ENST00000341947 PCF11O94913 1555 aaKnown RBP17.36■□□□□ 0.37
COL11A2-201ENST00000341947 TNRQ92752 1358 aa17.36■□□□□ 0.37
COL11A2-201ENST00000341947 CALM1P0DP23 149 aa17.36■□□□□ 0.37
COL11A2-201ENST00000341947 CALM2P0DP24 149 aa17.36■□□□□ 0.37
COL11A2-201ENST00000341947 CALM3P0DP25 149 aa17.36■□□□□ 0.37
COL11A2-201ENST00000341947 UVSSAQ2YD98 709 aa17.35■□□□□ 0.37
COL11A2-201ENST00000341947 MCMDC2Q4G0Z9 681 aa17.35■□□□□ 0.37
COL11A2-201ENST00000341947 HSF2BPO75031 334 aa17.35■□□□□ 0.37
COL11A2-201ENST00000341947 A0A1W2PRG0 241 aa17.35■□□□□ 0.37
COL11A2-201ENST00000341947 RRP9O43818 475 aaKnown RBP17.35■□□□□ 0.37
COL11A2-201ENST00000341947 IL15P40933 162 aaPredicted RBP17.35■□□□□ 0.37
COL11A2-201ENST00000341947 PRPHP41219 470 aa17.35■□□□□ 0.37
COL11A2-201ENST00000341947 TOM1O60784 492 aa17.35■□□□□ 0.37
COL11A2-201ENST00000341947 PLS1Q14651 629 aa17.35■□□□□ 0.37
COL11A2-201ENST00000341947 RASAL2Q9UJF2 1139 aa17.35■□□□□ 0.37
COL11A2-201ENST00000341947 RTL9Q8NET4 1388 aa17.35■□□□□ 0.37
COL11A2-201ENST00000341947 ZSCAN22P10073 491 aaPredicted RBP17.35■□□□□ 0.37
COL11A2-201ENST00000341947 VEZTQ9HBM0 779 aa17.35■□□□□ 0.37
COL11A2-201ENST00000341947 GNG11P61952 73 aa17.34■□□□□ 0.37
COL11A2-201ENST00000341947 COPS6Q7L5N1 327 aa17.34■□□□□ 0.37
COL11A2-201ENST00000341947 RGS22Q8NE09 1264 aa17.34■□□□□ 0.37
COL11A2-201ENST00000341947 ALDH1L1O75891 902 aa17.34■□□□□ 0.37
COL11A2-201ENST00000341947 SPAG1Q07617 926 aa17.34■□□□□ 0.37
COL11A2-201ENST00000341947 ASIC1P78348 528 aa17.34■□□□□ 0.37
COL11A2-201ENST00000341947 NPHP3Q7Z494 1330 aa17.34■□□□□ 0.37
COL11A2-201ENST00000341947 UBASH3AP57075 661 aa17.34■□□□□ 0.37
COL11A2-201ENST00000341947 SELENOOQ9BVL4 669 aa17.34■□□□□ 0.37
COL11A2-201ENST00000341947 PLB1Q6P1J6 1458 aa17.34■□□□□ 0.37
COL11A2-201ENST00000341947 RRP36Q96EU6 259 aaKnown RBP17.34■□□□□ 0.37
COL11A2-201ENST00000341947 SPDYE3A6NKU9 549 aa17.33■□□□□ 0.37
COL11A2-201ENST00000341947 CBX1P83916 185 aa17.33■□□□□ 0.37
COL11A2-201ENST00000341947 IQCGQ9H095 443 aaKnown RBP17.33■□□□□ 0.37
COL11A2-201ENST00000341947 PSMA7O14818 248 aa17.33■□□□□ 0.36
COL11A2-201ENST00000341947 SLC9C2Q5TAH2 1124 aa17.33■□□□□ 0.36
COL11A2-201ENST00000341947 OTUD6BQ8N6M0 293 aa17.33■□□□□ 0.36
COL11A2-201ENST00000341947 NECAB1Q8N987 351 aa17.33■□□□□ 0.36
COL11A2-201ENST00000341947 TCHPQ9BT92 498 aa17.33■□□□□ 0.36
COL11A2-201ENST00000341947 PARP3Q9Y6F1 533 aa17.33■□□□□ 0.36
COL11A2-201ENST00000341947 PLCG2P16885 1265 aa17.33■□□□□ 0.36
COL11A2-201ENST00000341947 GNAT2P19087 354 aa17.33■□□□□ 0.36
COL11A2-201ENST00000341947 POLD1P28340 1107 aa17.33■□□□□ 0.36
COL11A2-201ENST00000341947 DDB1Q16531 1140 aa17.33■□□□□ 0.36
COL11A2-201ENST00000341947 AKAP4Q5JQC9 854 aa17.33■□□□□ 0.36
COL11A2-201ENST00000341947 TTC16Q8NEE8 873 aa17.33■□□□□ 0.36
COL11A2-201ENST00000341947 GRM8O00222 908 aa17.32■□□□□ 0.36
COL11A2-201ENST00000341947 CEP135Q66GS9 1140 aa17.32■□□□□ 0.36
COL11A2-201ENST00000341947 C16orf71Q8IYS4 520 aaPredicted RBP17.32■□□□□ 0.36
COL11A2-201ENST00000341947 RBM27Q9P2N5 1060 aaKnown RBP17.32■□□□□ 0.36
COL11A2-201ENST00000341947 UBAP1LF5GYI3 381 aa17.32■□□□□ 0.36
COL11A2-201ENST00000341947 ARL1P40616 181 aaPredicted RBP17.32■□□□□ 0.36
COL11A2-201ENST00000341947 LMBR1LQ6UX01 489 aa17.32■□□□□ 0.36
COL11A2-201ENST00000341947 ARHGAP45Q92619 1136 aa17.32■□□□□ 0.36
COL11A2-201ENST00000341947 RBM8AQ9Y5S9 174 aaKnown RBP17.32■□□□□ 0.36
COL11A2-201ENST00000341947 LRRC2Q9BYS8 371 aa17.32■□□□□ 0.36
COL11A2-201ENST00000341947 FANCAO15360 1455 aa17.32■□□□□ 0.36
COL11A2-201ENST00000341947 Q6ZUG5 572 aa17.31■□□□□ 0.36
COL11A2-201ENST00000341947 SKAP1Q86WV1 359 aa17.31■□□□□ 0.36
COL11A2-201ENST00000341947 C8orf37Q96NL8 207 aa17.31■□□□□ 0.36
COL11A2-201ENST00000341947 MRPS27Q92552 414 aaKnown RBP17.31■□□□□ 0.36
COL11A2-201ENST00000341947 FAM13AO94988 1023 aa17.31■□□□□ 0.36
COL11A2-201ENST00000341947 KSR2Q6VAB6 950 aa17.31■□□□□ 0.36
COL11A2-201ENST00000341947 DZIP3Q86Y13 1208 aaKnown RBP17.31■□□□□ 0.36
COL11A2-201ENST00000341947 TICAM2Q86XR7 235 aa17.31■□□□□ 0.36
COL11A2-201ENST00000341947 TMX3Q96JJ7 454 aa17.31■□□□□ 0.36
COL11A2-201ENST00000341947 NUCB1Q02818 461 aa17.3■□□□□ 0.36
COL11A2-201ENST00000341947 CUL7Q14999 1698 aa17.3■□□□□ 0.36
COL11A2-201ENST00000341947 KIF4AO95239 1232 aa17.3■□□□□ 0.36
COL11A2-201ENST00000341947 SLC39A6Q13433 755 aa17.3■□□□□ 0.36
COL11A2-201ENST00000341947 TPTE2Q6XPS3 522 aa17.3■□□□□ 0.36
COL11A2-201ENST00000341947 JDP2Q8WYK2 163 aa17.3■□□□□ 0.36
COL11A2-201ENST00000341947 RALGAPBQ86X10 1494 aa17.3■□□□□ 0.36
COL11A2-201ENST00000341947 CCDC171Q6TFL3 1326 aa17.3■□□□□ 0.36
COL11A2-201ENST00000341947 CALML3P27482 149 aa17.3■□□□□ 0.36
COL11A2-201ENST00000341947 ZC3H12CQ9C0D7 883 aaKnown RBP17.3■□□□□ 0.36
COL11A2-201ENST00000341947 PAG1Q9NWQ8 432 aa17.3■□□□□ 0.36
COL11A2-201ENST00000341947 KRT79Q5XKE5 535 aa17.3■□□□□ 0.36
COL11A2-201ENST00000341947 RAB3IL1Q8TBN0 382 aa17.3■□□□□ 0.36
COL11A2-201ENST00000341947 SIRT1Q96EB6 747 aa17.3■□□□□ 0.36
COL11A2-201ENST00000341947 LMBR1Q8WVP7 490 aa17.29■□□□□ 0.36
COL11A2-201ENST00000341947 LRSAM1Q6UWE0 723 aa17.29■□□□□ 0.36
COL11A2-201ENST00000341947 ZSWIM4Q9H7M6 989 aa17.29■□□□□ 0.36
COL11A2-201ENST00000341947 RTCBQ9Y3I0 505 aaKnown RBP17.29■□□□□ 0.36
COL11A2-201ENST00000341947 SDSP20132 328 aa17.29■□□□□ 0.36
COL11A2-201ENST00000341947 GJC1P36383 396 aa17.29■□□□□ 0.36
COL11A2-201ENST00000341947 FAM212AQ96EL1 285 aa17.29■□□□□ 0.36
COL11A2-201ENST00000341947 EYA3Q99504 573 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms