RNA–Protein interactions for RNA: ENST00000322918.9

CD46-202, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-202ENST00000322918 ERVV-1B6SEH8 477 aa10.98□□□□□ -0.65
CD46-202ENST00000322918 PKP1Q13835 747 aa10.98□□□□□ -0.65
CD46-202ENST00000322918 CCDC158Q5M9N0 1113 aa10.98□□□□□ -0.65
CD46-202ENST00000322918 FAM196AQ6ZSG2 479 aa10.98□□□□□ -0.65
CD46-202ENST00000322918 RBM8AQ9Y5S9 174 aaKnown RBP10.98□□□□□ -0.65
CD46-202ENST00000322918 SNX14Q9Y5W7 946 aa10.98□□□□□ -0.65
CD46-202ENST00000322918 SNX21Q969T3 373 aa10.97□□□□□ -0.65
CD46-202ENST00000322918 TAOK2Q9UL54 1235 aa10.97□□□□□ -0.65
CD46-202ENST00000322918 PAPPAQ13219 1627 aa10.97□□□□□ -0.65
CD46-202ENST00000322918 ZAP70P43403 619 aa10.97□□□□□ -0.65
CD46-202ENST00000322918 SLC51AQ86UW1 340 aa10.97□□□□□ -0.65
CD46-202ENST00000322918 CHMP5Q9NZZ3 219 aa10.97□□□□□ -0.65
CD46-202ENST00000322918 RTCBQ9Y3I0 505 aaKnown RBP10.97□□□□□ -0.65
CD46-202ENST00000322918 USP42Q9H9J4 1324 aaKnown RBP10.97□□□□□ -0.65
CD46-202ENST00000322918 CSF1RP07333 972 aa10.96□□□□□ -0.65
CD46-202ENST00000322918 VPS53Q5VIR6 699 aa10.96□□□□□ -0.65
CD46-202ENST00000322918 AK7Q96M32 723 aa10.96□□□□□ -0.65
CD46-202ENST00000322918 LRRC4BQ9NT99 713 aa10.96□□□□□ -0.65
CD46-202ENST00000322918 ZNF652Q9Y2D9 606 aa10.96□□□□□ -0.65
CD46-202ENST00000322918 RAD50Q92878 1312 aa10.96□□□□□ -0.65
CD46-202ENST00000322918 MYH14Q7Z406 1995 aaKnown RBP10.96□□□□□ -0.65
CD46-202ENST00000322918 RFC4P35249 363 aa10.96□□□□□ -0.66
CD46-202ENST00000322918 NBPF5PQ86XG9 351 aaPredicted RBP10.96□□□□□ -0.66
CD46-202ENST00000322918 ARHGEF1Q92888 912 aaKnown RBP10.96□□□□□ -0.66
CD46-202ENST00000322918 IDH1O75874 414 aaKnown RBP10.95□□□□□ -0.66
CD46-202ENST00000322918 SSFA2P28290 1259 aa10.95□□□□□ -0.66
CD46-202ENST00000322918 HSPA4P34932 840 aa10.95□□□□□ -0.66
CD46-202ENST00000322918 TMX3Q96JJ7 454 aa10.95□□□□□ -0.66
CD46-202ENST00000322918 SETDB2Q96T68 719 aa10.95□□□□□ -0.66
CD46-202ENST00000322918 CCDC171Q6TFL3 1326 aa10.95□□□□□ -0.66
CD46-202ENST00000322918 A0A0G2JLW4 131 aa10.95□□□□□ -0.66
CD46-202ENST00000322918 PPFIA3O75145 1194 aa10.95□□□□□ -0.66
CD46-202ENST00000322918 PHKA1P46020 1223 aa10.95□□□□□ -0.66
CD46-202ENST00000322918 HAUS7Q99871 368 aa10.95□□□□□ -0.66
CD46-202ENST00000322918 LRRC2Q9BYS8 371 aa10.95□□□□□ -0.66
CD46-202ENST00000322918 RIPOR2Q9Y4F9 1068 aa10.95□□□□□ -0.66
CD46-202ENST00000322918 NTSR2O95665 410 aa10.95□□□□□ -0.66
CD46-202ENST00000322918 STK11IPQ8N1F8 1099 aa10.95□□□□□ -0.66
CD46-202ENST00000322918 NAP1L2Q9ULW6 460 aaPredicted RBP10.95□□□□□ -0.66
CD46-202ENST00000322918 JAG2Q9Y219 1238 aa10.95□□□□□ -0.66
CD46-202ENST00000322918 RRAGDQ9NQL2 400 aaPredicted RBP10.94□□□□□ -0.66
CD46-202ENST00000322918 AKAP2Q9Y2D5 859 aa10.94□□□□□ -0.66
CD46-202ENST00000322918 HAND2P61296 217 aa10.94□□□□□ -0.66
CD46-202ENST00000322918 STK3Q13188 491 aa10.94□□□□□ -0.66
CD46-202ENST00000322918 CCDC152Q4G0S7 254 aa10.94□□□□□ -0.66
CD46-202ENST00000322918 NUP188Q5SRE5 1749 aa10.94□□□□□ -0.66
CD46-202ENST00000322918 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.94□□□□□ -0.66
CD46-202ENST00000322918 ZKSCAN1P17029 563 aaPredicted RBP10.93□□□□□ -0.66
CD46-202ENST00000322918 IGHMBP2P38935 993 aaKnown RBP10.93□□□□□ -0.66
CD46-202ENST00000322918 CREB3L3Q68CJ9 461 aa10.93□□□□□ -0.66
CD46-202ENST00000322918 KRT27Q7Z3Y8 459 aa10.93□□□□□ -0.66
CD46-202ENST00000322918 KBTBD3Q8NAB2 608 aa10.93□□□□□ -0.66
CD46-202ENST00000322918 TNPO1Q92973 898 aaKnown RBP10.93□□□□□ -0.66
CD46-202ENST00000322918 BCL2L12Q9HB09 334 aa10.93□□□□□ -0.66
CD46-202ENST00000322918 CIAO1O76071 339 aa10.93□□□□□ -0.66
CD46-202ENST00000322918 PDE8BO95263 885 aa10.93□□□□□ -0.66
CD46-202ENST00000322918 MCAMP43121 646 aa10.93□□□□□ -0.66
CD46-202ENST00000322918 BCAMP50895 628 aa10.93□□□□□ -0.66
CD46-202ENST00000322918 CHST3Q7LGC8 479 aa10.93□□□□□ -0.66
CD46-202ENST00000322918 CDHR2Q9BYE9 1310 aa10.93□□□□□ -0.66
CD46-202ENST00000322918 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.93□□□□□ -0.66
CD46-202ENST00000322918 AK2P54819 239 aa10.93□□□□□ -0.66
CD46-202ENST00000322918 TRAPPC3LQ5T215 181 aa10.93□□□□□ -0.66
CD46-202ENST00000322918 NECAB1Q8N987 351 aa10.93□□□□□ -0.66
CD46-202ENST00000322918 PLA2G12BQ9BX93 195 aa10.93□□□□□ -0.66
CD46-202ENST00000322918 TJP1Q07157 1748 aa10.93□□□□□ -0.66
CD46-202ENST00000322918 AK9Q5TCS8 1911 aa10.92□□□□□ -0.66
CD46-202ENST00000322918 PARP10Q53GL7 1025 aa10.92□□□□□ -0.66
CD46-202ENST00000322918 TTLL5Q6EMB2 1281 aa10.92□□□□□ -0.66
CD46-202ENST00000322918 CELF1Q92879 486 aaKnown RBP10.92□□□□□ -0.66
CD46-202ENST00000322918 ZNF609O15014 1411 aa10.92□□□□□ -0.66
CD46-202ENST00000322918 HIP1O00291 1037 aa10.92□□□□□ -0.66
CD46-202ENST00000322918 SLC27A2O14975 620 aa10.92□□□□□ -0.66
CD46-202ENST00000322918 RPS6KA4O75676 772 aa10.92□□□□□ -0.66
CD46-202ENST00000322918 APPP05067 770 aa10.92□□□□□ -0.66
CD46-202ENST00000322918 FGD1P98174 961 aa10.92□□□□□ -0.66
CD46-202ENST00000322918 CCDC102BQ68D86 513 aa10.92□□□□□ -0.66
CD46-202ENST00000322918 LARGE1O95461 756 aa10.91□□□□□ -0.66
CD46-202ENST00000322918 MCMDC2Q4G0Z9 681 aa10.91□□□□□ -0.66
CD46-202ENST00000322918 NWD2Q9ULI1 1742 aa10.91□□□□□ -0.66
CD46-202ENST00000322918 GYG1P46976 350 aa10.91□□□□□ -0.66
CD46-202ENST00000322918 CHRNDQ07001 517 aa10.91□□□□□ -0.66
CD46-202ENST00000322918 SLC9C2Q5TAH2 1124 aa10.91□□□□□ -0.66
CD46-202ENST00000322918 OSBP2Q969R2 916 aa10.91□□□□□ -0.66
CD46-202ENST00000322918 PDRG1Q9NUG6 133 aa10.91□□□□□ -0.66
CD46-202ENST00000322918 ABCF2Q9UG63 623 aa10.91□□□□□ -0.66
CD46-202ENST00000322918 NUP98P52948 1817 aa10.91□□□□□ -0.66
CD46-202ENST00000322918 M0R2C6 588 aa10.91□□□□□ -0.66
CD46-202ENST00000322918 CCDC83Q8IWF9 413 aa10.91□□□□□ -0.66
CD46-202ENST00000322918 MAP4K1Q92918 833 aa10.91□□□□□ -0.66
CD46-202ENST00000322918 CYP46A1Q9Y6A2 500 aa10.91□□□□□ -0.66
CD46-202ENST00000322918 NECTIN1Q15223 517 aa10.9□□□□□ -0.66
CD46-202ENST00000322918 VPS37DQ86XT2 251 aa10.9□□□□□ -0.66
CD46-202ENST00000322918 ANKRD18AQ8IVF6 992 aa10.9□□□□□ -0.66
CD46-202ENST00000322918 PUS7LQ9H0K6 701 aaKnown RBP10.9□□□□□ -0.66
CD46-202ENST00000322918 NARFQ9UHQ1 456 aa10.9□□□□□ -0.66
CD46-202ENST00000322918 WNK3Q9BYP7 1800 aa10.9□□□□□ -0.66
CD46-202ENST00000322918 ABCC12Q96J65 1359 aa10.9□□□□□ -0.66
CD46-202ENST00000322918 CYP2E1P05181 493 aaPredicted RBP10.9□□□□□ -0.66
CD46-202ENST00000322918 PUM3Q15397 648 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms