RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 PGBD1Q96JS3 809 aa30■■■□□ 2.39
HOXB3-201ENST00000311626 ALDH8A1Q9H2A2 487 aaPredicted RBP30■■■□□ 2.39
HOXB3-201ENST00000311626 TYRO3Q06418 890 aa29.99■■■□□ 2.39
HOXB3-201ENST00000311626 TSC1Q92574 1164 aa29.99■■■□□ 2.39
HOXB3-201ENST00000311626 U3KPZ7 1027 aaPredicted RBP29.99■■■□□ 2.39
HOXB3-201ENST00000311626 NR1I2O75469 434 aa29.99■■■□□ 2.39
HOXB3-201ENST00000311626 CCT2P78371 535 aaKnown RBP29.99■■■□□ 2.39
HOXB3-201ENST00000311626 CCDC85AQ96PX6 553 aaPredicted RBP29.99■■■□□ 2.39
HOXB3-201ENST00000311626 TNMDQ9H2S6 317 aa29.99■■■□□ 2.39
HOXB3-201ENST00000311626 TMEM94Q12767 1356 aa29.99■■■□□ 2.39
HOXB3-201ENST00000311626 H3BQV1 296 aa29.98■■■□□ 2.39
HOXB3-201ENST00000311626 APOBRQ0VD83 1088 aa29.98■■■□□ 2.39
HOXB3-201ENST00000311626 KRT32Q14532 448 aa29.98■■■□□ 2.39
HOXB3-201ENST00000311626 IFFO2Q5TF58 517 aa29.98■■■□□ 2.39
HOXB3-201ENST00000311626 FTOQ9C0B1 505 aaKnown RBP eCLIP29.98■■■□□ 2.39
HOXB3-201ENST00000311626 ZNF330Q9Y3S2 320 aaPredicted RBP29.98■■■□□ 2.39
HOXB3-201ENST00000311626 SASS6Q6UVJ0 657 aa29.98■■■□□ 2.39
HOXB3-201ENST00000311626 KBTBD3Q8NAB2 608 aa29.98■■■□□ 2.39
HOXB3-201ENST00000311626 BICD2Q8TD16 824 aa29.98■■■□□ 2.39
HOXB3-201ENST00000311626 PUS3Q9BZE2 481 aaKnown RBP29.98■■■□□ 2.39
HOXB3-201ENST00000311626 TERF1P54274 439 aa29.97■■■□□ 2.39
HOXB3-201ENST00000311626 ALS2Q96Q42 1657 aa29.97■■■□□ 2.39
HOXB3-201ENST00000311626 PIBF1Q8WXW3 757 aa29.97■■■□□ 2.39
HOXB3-201ENST00000311626 PAG1Q9NWQ8 432 aa29.97■■■□□ 2.39
HOXB3-201ENST00000311626 NCOA5Q9HCD5 579 aaKnown RBP29.96■■■□□ 2.39
HOXB3-201ENST00000311626 ANO6Q4KMQ2 910 aa29.96■■■□□ 2.39
HOXB3-201ENST00000311626 SCAND2PQ9GZW5 306 aaPredicted RBP29.96■■■□□ 2.39
HOXB3-201ENST00000311626 KCNF1Q9H3M0 494 aa29.96■■■□□ 2.39
HOXB3-201ENST00000311626 H7C1W4 665 aa29.95■■■□□ 2.39
HOXB3-201ENST00000311626 RESTQ13127 1097 aa29.95■■■□□ 2.39
HOXB3-201ENST00000311626 PYCARDQ9ULZ3 195 aa29.95■■■□□ 2.39
HOXB3-201ENST00000311626 ELP1O95163 1332 aa29.95■■■□□ 2.39
HOXB3-201ENST00000311626 MST1RQ04912 1400 aa29.95■■■□□ 2.38
HOXB3-201ENST00000311626 GUCY1B3Q02153 619 aa29.94■■■□□ 2.38
HOXB3-201ENST00000311626 TTLL5Q6EMB2 1281 aa29.94■■■□□ 2.38
HOXB3-201ENST00000311626 CWC25Q9NXE8 425 aaPredicted RBP29.94■■■□□ 2.38
HOXB3-201ENST00000311626 ARFGEF2Q9Y6D5 1785 aa29.94■■■□□ 2.38
HOXB3-201ENST00000311626 FAM177BA6PVY3 158 aa29.93■■■□□ 2.38
HOXB3-201ENST00000311626 FAM200AQ8TCP9 573 aa29.92■■■□□ 2.38
HOXB3-201ENST00000311626 CBX8Q9HC52 389 aa29.92■■■□□ 2.38
HOXB3-201ENST00000311626 CTDNEP1O95476 244 aa29.91■■■□□ 2.38
HOXB3-201ENST00000311626 HSP90AB3PQ58FF7 597 aa29.91■■■□□ 2.38
HOXB3-201ENST00000311626 COL18A1P39060 1754 aa29.91■■■□□ 2.38
HOXB3-201ENST00000311626 LMTK3Q96Q04 1460 aa29.91■■■□□ 2.38
HOXB3-201ENST00000311626 GPHNQ9NQX3 736 aaPredicted RBP29.91■■■□□ 2.38
HOXB3-201ENST00000311626 KIF1AQ12756 1690 aa29.9■■■□□ 2.38
HOXB3-201ENST00000311626 A0A087WWV3 80 aa29.9■■■□□ 2.38
HOXB3-201ENST00000311626 TOM1L2Q6ZVM7 507 aa29.9■■■□□ 2.38
HOXB3-201ENST00000311626 PDCL3Q9H2J4 239 aa29.9■■■□□ 2.38
HOXB3-201ENST00000311626 IFIT1P09914 478 aaKnown RBP29.9■■■□□ 2.38
HOXB3-201ENST00000311626 FKBP4Q02790 459 aaKnown RBP eCLIP29.9■■■□□ 2.38
HOXB3-201ENST00000311626 A0A1B0GUL7 405 aa29.89■■■□□ 2.38
HOXB3-201ENST00000311626 DHX32Q7L7V1 743 aaKnown RBP29.89■■■□□ 2.38
HOXB3-201ENST00000311626 DNAJC25Q9H1X3 360 aa29.89■■■□□ 2.38
HOXB3-201ENST00000311626 CLSTN2Q9H4D0 955 aa29.89■■■□□ 2.38
HOXB3-201ENST00000311626 ADAMTSL3P82987 1691 aa29.89■■■□□ 2.38
HOXB3-201ENST00000311626 HSPD1P10809 573 aaKnown RBP29.89■■■□□ 2.37
HOXB3-201ENST00000311626 PTGS1P23219 599 aa29.89■■■□□ 2.37
HOXB3-201ENST00000311626 NSUN7Q8NE18 718 aaKnown RBP29.89■■■□□ 2.37
HOXB3-201ENST00000311626 M0R2C6 588 aa29.88■■■□□ 2.37
HOXB3-201ENST00000311626 ZCRB1Q8TBF4 217 aaKnown RBP29.88■■■□□ 2.37
HOXB3-201ENST00000311626 SH3TC1Q8TE82 1336 aa29.88■■■□□ 2.37
HOXB3-201ENST00000311626 PTPDC1A2A3K4 754 aa29.87■■■□□ 2.37
HOXB3-201ENST00000311626 E7EWF7 191 aa29.87■■■□□ 2.37
HOXB3-201ENST00000311626 HAND2P61296 217 aa29.87■■■□□ 2.37
HOXB3-201ENST00000311626 NRBP1Q9UHY1 535 aa29.87■■■□□ 2.37
HOXB3-201ENST00000311626 ADORA1P30542 326 aa29.87■■■□□ 2.37
HOXB3-201ENST00000311626 VSIG10Q8N0Z9 540 aa29.87■■■□□ 2.37
HOXB3-201ENST00000311626 MAST3O60307 1309 aa29.87■■■□□ 2.37
HOXB3-201ENST00000311626 EYA2O00167 538 aa29.86■■■□□ 2.37
HOXB3-201ENST00000311626 PFKFB2O60825 505 aa29.86■■■□□ 2.37
HOXB3-201ENST00000311626 ZMYM1Q5SVZ6 1142 aa29.86■■■□□ 2.37
HOXB3-201ENST00000311626 RAB11FIP4Q86YS3 637 aa29.86■■■□□ 2.37
HOXB3-201ENST00000311626 IL15P40933 162 aaPredicted RBP29.85■■■□□ 2.37
HOXB3-201ENST00000311626 DDX19AQ9NUU7 478 aaKnown RBP29.85■■■□□ 2.37
HOXB3-201ENST00000311626 SPATA31A3Q5VYP0 1347 aa29.84■■■□□ 2.37
HOXB3-201ENST00000311626 PDIA4P13667 645 aaKnown RBP29.84■■■□□ 2.37
HOXB3-201ENST00000311626 DRC7Q8IY82 874 aa29.84■■■□□ 2.37
HOXB3-201ENST00000311626 SMARCC2Q8TAQ2 1214 aa29.84■■■□□ 2.37
HOXB3-201ENST00000311626 OSBP2Q969R2 916 aa29.84■■■□□ 2.37
HOXB3-201ENST00000311626 PRDM11Q9NQV5 511 aa29.84■■■□□ 2.37
HOXB3-201ENST00000311626 HELLSQ9NRZ9 838 aa29.84■■■□□ 2.37
HOXB3-201ENST00000311626 ADD1P35611 737 aaKnown RBP29.84■■■□□ 2.37
HOXB3-201ENST00000311626 ERCC4Q92889 916 aaPredicted RBP29.84■■■□□ 2.37
HOXB3-201ENST00000311626 TNS3Q68CZ2 1445 aa29.83■■■□□ 2.37
HOXB3-201ENST00000311626 DYNC1I1O14576 645 aa29.83■■■□□ 2.37
HOXB3-201ENST00000311626 EXOSC10Q01780 885 aaKnown RBP29.83■■■□□ 2.37
HOXB3-201ENST00000311626 LRMPQ12912 555 aa29.83■■■□□ 2.37
HOXB3-201ENST00000311626 OTUD7BQ6GQQ9 843 aa29.83■■■□□ 2.37
HOXB3-201ENST00000311626 KIAA1524Q8TCG1 905 aa29.83■■■□□ 2.37
HOXB3-201ENST00000311626 TAOK2Q9UL54 1235 aa29.83■■■□□ 2.37
HOXB3-201ENST00000311626 GLI3P10071 1580 aa29.82■■■□□ 2.36
HOXB3-201ENST00000311626 RNF113AO15541 343 aaKnown RBP29.82■■■□□ 2.36
HOXB3-201ENST00000311626 PI16Q6UXB8 463 aa29.82■■■□□ 2.36
HOXB3-201ENST00000311626 FBXW7Q969H0 707 aa29.82■■■□□ 2.36
HOXB3-201ENST00000311626 TRIM5Q9C035 493 aa29.82■■■□□ 2.36
HOXB3-201ENST00000311626 PALLDQ8WX93 1383 aa29.82■■■□□ 2.36
HOXB3-201ENST00000311626 CCDC186Q7Z3E2 898 aa29.82■■■□□ 2.36
HOXB3-201ENST00000311626 SYNE4Q8N205 404 aa29.82■■■□□ 2.36
HOXB3-201ENST00000311626 GOLPH3LQ9H4A5 285 aa29.82■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms