RNA–Protein interactions for RNA: ENST00000308639.13

RELA-201, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RELA, Length 2,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-201ENST00000308639 KCNF1Q9H3M0 494 aa24.69■■□□□ 1.54
RELA-201ENST00000308639 GOLGA6L4A6NEF3 574 aa24.68■■□□□ 1.54
RELA-201ENST00000308639 ALS2Q96Q42 1657 aa24.68■■□□□ 1.54
RELA-201ENST00000308639 NR1I2O75469 434 aa24.68■■□□□ 1.54
RELA-201ENST00000308639 SCRN1Q12765 414 aa24.68■■□□□ 1.54
RELA-201ENST00000308639 FTOQ9C0B1 505 aaKnown RBP eCLIP24.68■■□□□ 1.54
RELA-201ENST00000308639 PYCARDQ9ULZ3 195 aa24.68■■□□□ 1.54
RELA-201ENST00000308639 ARFGEF2Q9Y6D5 1785 aa24.67■■□□□ 1.54
RELA-201ENST00000308639 FOXO4P98177 505 aa24.67■■□□□ 1.54
RELA-201ENST00000308639 TNMDQ9H2S6 317 aa24.67■■□□□ 1.54
RELA-201ENST00000308639 FGD1P98174 961 aa24.67■■□□□ 1.54
RELA-201ENST00000308639 CHST3Q7LGC8 479 aa24.67■■□□□ 1.54
RELA-201ENST00000308639 ALDH8A1Q9H2A2 487 aaPredicted RBP24.67■■□□□ 1.54
RELA-201ENST00000308639 A1BGP04217 495 aa24.66■■□□□ 1.54
RELA-201ENST00000308639 LRRC24Q50LG9 513 aa24.66■■□□□ 1.54
RELA-201ENST00000308639 ATG9AQ7Z3C6 839 aa24.66■■□□□ 1.54
RELA-201ENST00000308639 ZBTB3Q9H5J0 574 aa24.66■■□□□ 1.54
RELA-201ENST00000308639 PRDM4Q9UKN5 801 aa24.66■■□□□ 1.54
RELA-201ENST00000308639 ELP1O95163 1332 aa24.66■■□□□ 1.54
RELA-201ENST00000308639 FAM177BA6PVY3 158 aa24.66■■□□□ 1.54
RELA-201ENST00000308639 PLBD2Q8NHP8 589 aa24.66■■□□□ 1.54
RELA-201ENST00000308639 ATF3P18847 181 aa24.65■■□□□ 1.54
RELA-201ENST00000308639 ANO6Q4KMQ2 910 aa24.65■■□□□ 1.54
RELA-201ENST00000308639 BICD2Q8TD16 824 aa24.65■■□□□ 1.54
RELA-201ENST00000308639 U3KPZ7 1027 aaPredicted RBP24.65■■□□□ 1.54
RELA-201ENST00000308639 CCT2P78371 535 aaKnown RBP24.65■■□□□ 1.54
RELA-201ENST00000308639 APOBRQ0VD83 1088 aa24.65■■□□□ 1.54
RELA-201ENST00000308639 RESTQ13127 1097 aa24.65■■□□□ 1.54
RELA-201ENST00000308639 NAP1L2Q9ULW6 460 aaPredicted RBP24.65■■□□□ 1.54
RELA-201ENST00000308639 KRT32Q14532 448 aa24.64■■□□□ 1.54
RELA-201ENST00000308639 KBTBD3Q8NAB2 608 aa24.64■■□□□ 1.54
RELA-201ENST00000308639 NCOA5Q9HCD5 579 aaKnown RBP24.64■■□□□ 1.54
RELA-201ENST00000308639 H3BQV1 296 aa24.64■■□□□ 1.53
RELA-201ENST00000308639 IFFO2Q5TF58 517 aa24.64■■□□□ 1.53
RELA-201ENST00000308639 SCAND2PQ9GZW5 306 aaPredicted RBP24.64■■□□□ 1.53
RELA-201ENST00000308639 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.64■■□□□ 1.53
RELA-201ENST00000308639 LMTK3Q96Q04 1460 aa24.63■■□□□ 1.53
RELA-201ENST00000308639 FAM200AQ8TCP9 573 aa24.63■■□□□ 1.53
RELA-201ENST00000308639 PUS3Q9BZE2 481 aaKnown RBP24.63■■□□□ 1.53
RELA-201ENST00000308639 COL18A1P39060 1754 aa24.62■■□□□ 1.53
RELA-201ENST00000308639 CCDC85AQ96PX6 553 aaPredicted RBP24.62■■□□□ 1.53
RELA-201ENST00000308639 CBX8Q9HC52 389 aa24.62■■□□□ 1.53
RELA-201ENST00000308639 PAG1Q9NWQ8 432 aa24.62■■□□□ 1.53
RELA-201ENST00000308639 A0A087WWV3 80 aa24.61■■□□□ 1.53
RELA-201ENST00000308639 GUCY1B3Q02153 619 aa24.61■■□□□ 1.53
RELA-201ENST00000308639 MST1RQ04912 1400 aa24.61■■□□□ 1.53
RELA-201ENST00000308639 KIF1AQ12756 1690 aa24.61■■□□□ 1.53
RELA-201ENST00000308639 TMEM94Q12767 1356 aa24.61■■□□□ 1.53
RELA-201ENST00000308639 TTLL5Q6EMB2 1281 aa24.61■■□□□ 1.53
RELA-201ENST00000308639 H7C1W4 665 aa24.6■■□□□ 1.53
RELA-201ENST00000308639 CTDNEP1O95476 244 aa24.6■■□□□ 1.53
RELA-201ENST00000308639 PTGS1P23219 599 aa24.6■■□□□ 1.53
RELA-201ENST00000308639 ZNF330Q9Y3S2 320 aaPredicted RBP24.6■■□□□ 1.53
RELA-201ENST00000308639 DNAJC25Q9H1X3 360 aa24.6■■□□□ 1.53
RELA-201ENST00000308639 CLSTN2Q9H4D0 955 aa24.59■■□□□ 1.53
RELA-201ENST00000308639 GLI3P10071 1580 aa24.59■■□□□ 1.53
RELA-201ENST00000308639 GPHNQ9NQX3 736 aaPredicted RBP24.59■■□□□ 1.53
RELA-201ENST00000308639 NRBP1Q9UHY1 535 aa24.59■■□□□ 1.53
RELA-201ENST00000308639 LAMA4Q16363 1823 aa24.59■■□□□ 1.53
RELA-201ENST00000308639 NSUN7Q8NE18 718 aaKnown RBP24.58■■□□□ 1.53
RELA-201ENST00000308639 DYNC1I1O14576 645 aa24.58■■□□□ 1.53
RELA-201ENST00000308639 HSP90AB3PQ58FF7 597 aa24.58■■□□□ 1.53
RELA-201ENST00000308639 CWC25Q9NXE8 425 aaPredicted RBP24.58■■□□□ 1.53
RELA-201ENST00000308639 SH3TC1Q8TE82 1336 aa24.57■■□□□ 1.52
RELA-201ENST00000308639 ADAMTSL3P82987 1691 aa24.57■■□□□ 1.52
RELA-201ENST00000308639 PTPDC1A2A3K4 754 aa24.57■■□□□ 1.52
RELA-201ENST00000308639 KIAA1524Q8TCG1 905 aa24.57■■□□□ 1.52
RELA-201ENST00000308639 HSPD1P10809 573 aaKnown RBP24.57■■□□□ 1.52
RELA-201ENST00000308639 LRMPQ12912 555 aa24.57■■□□□ 1.52
RELA-201ENST00000308639 DHX32Q7L7V1 743 aaKnown RBP24.57■■□□□ 1.52
RELA-201ENST00000308639 MAST3O60307 1309 aa24.57■■□□□ 1.52
RELA-201ENST00000308639 A0A1B0GUL7 405 aa24.56■■□□□ 1.52
RELA-201ENST00000308639 M0R2C6 588 aa24.56■■□□□ 1.52
RELA-201ENST00000308639 DDX19AQ9NUU7 478 aaKnown RBP24.56■■□□□ 1.52
RELA-201ENST00000308639 SPTLC3Q9NUV7 552 aa24.56■■□□□ 1.52
RELA-201ENST00000308639 E7EWF7 191 aa24.56■■□□□ 1.52
RELA-201ENST00000308639 IFIT1P09914 478 aaKnown RBP24.56■■□□□ 1.52
RELA-201ENST00000308639 ADD1P35611 737 aaKnown RBP24.56■■□□□ 1.52
RELA-201ENST00000308639 MYRIPQ8NFW9 859 aa24.56■■□□□ 1.52
RELA-201ENST00000308639 SMARCC2Q8TAQ2 1214 aa24.56■■□□□ 1.52
RELA-201ENST00000308639 PFKFB2O60825 505 aa24.55■■□□□ 1.52
RELA-201ENST00000308639 FKBP4Q02790 459 aaKnown RBP eCLIP24.55■■□□□ 1.52
RELA-201ENST00000308639 ERCC4Q92889 916 aaPredicted RBP24.55■■□□□ 1.52
RELA-201ENST00000308639 HAND2P61296 217 aa24.55■■□□□ 1.52
RELA-201ENST00000308639 ZMYM1Q5SVZ6 1142 aa24.55■■□□□ 1.52
RELA-201ENST00000308639 ADORA1P30542 326 aa24.54■■□□□ 1.52
RELA-201ENST00000308639 CCDC186Q7Z3E2 898 aa24.54■■□□□ 1.52
RELA-201ENST00000308639 RAB11FIP4Q86YS3 637 aa24.54■■□□□ 1.52
RELA-201ENST00000308639 PDIA4P13667 645 aaKnown RBP24.54■■□□□ 1.52
RELA-201ENST00000308639 GOLPH3LQ9H4A5 285 aa24.54■■□□□ 1.52
RELA-201ENST00000308639 RFX7Q2KHR2 1363 aa24.53■■□□□ 1.52
RELA-201ENST00000308639 PALLDQ8WX93 1383 aa24.53■■□□□ 1.52
RELA-201ENST00000308639 EYA2O00167 538 aa24.53■■□□□ 1.52
RELA-201ENST00000308639 DRC7Q8IY82 874 aa24.53■■□□□ 1.52
RELA-201ENST00000308639 USP28Q96RU2 1077 aa24.53■■□□□ 1.52
RELA-201ENST00000308639 TRIM5Q9C035 493 aa24.53■■□□□ 1.52
RELA-201ENST00000308639 ZNF165P49910 485 aa24.53■■□□□ 1.52
RELA-201ENST00000308639 EXOSC10Q01780 885 aaKnown RBP24.53■■□□□ 1.52
RELA-201ENST00000308639 RBM43Q6ZSC3 357 aaKnown RBP24.53■■□□□ 1.52
RELA-201ENST00000308639 OSBP2Q969R2 916 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms