RNA–Protein interactions for RNA: ENST00000303296.8

HIPK3-201, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 5 BASIC

Gene HIPK3, Length 7,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-201ENST00000303296 INF2Q27J81 1249 aa16.13■□□□□ 0.17
HIPK3-201ENST00000303296 RNF41Q9H4P4 317 aaPredicted RBP16.13■□□□□ 0.17
HIPK3-201ENST00000303296 RAB11FIP3O75154 756 aa16.13■□□□□ 0.17
HIPK3-201ENST00000303296 NEDD9Q14511 834 aa16.13■□□□□ 0.17
HIPK3-201ENST00000303296 CTAGE5O15320 804 aa16.12■□□□□ 0.17
HIPK3-201ENST00000303296 PCK1P35558 622 aa16.12■□□□□ 0.17
HIPK3-201ENST00000303296 UBASH3AP57075 661 aa16.12■□□□□ 0.17
HIPK3-201ENST00000303296 GSDMDP57764 484 aa16.12■□□□□ 0.17
HIPK3-201ENST00000303296 PDE4BQ07343 736 aa16.12■□□□□ 0.17
HIPK3-201ENST00000303296 ATP11AP98196 1134 aa16.12■□□□□ 0.17
HIPK3-201ENST00000303296 ARHGEF2Q92974 986 aaKnown RBP16.12■□□□□ 0.17
HIPK3-201ENST00000303296 MCM4P33991 863 aa16.12■□□□□ 0.17
HIPK3-201ENST00000303296 PICALMQ13492 652 aa16.12■□□□□ 0.17
HIPK3-201ENST00000303296 TMEM57Q8N5G2 664 aa16.12■□□□□ 0.17
HIPK3-201ENST00000303296 ADCY5O95622 1261 aa16.12■□□□□ 0.17
HIPK3-201ENST00000303296 EHBP1Q8NDI1 1231 aa16.12■□□□□ 0.17
HIPK3-201ENST00000303296 NCAPGQ9BPX3 1015 aa16.12■□□□□ 0.17
HIPK3-201ENST00000303296 SMIM24O75264 130 aa16.11■□□□□ 0.17
HIPK3-201ENST00000303296 XRCC6P12956 609 aaKnown RBP eCLIP16.11■□□□□ 0.172e-6■■■□□ 18.8
HIPK3-201ENST00000303296 ERMNQ8TAM6 284 aa16.11■□□□□ 0.17
HIPK3-201ENST00000303296 PRAM1Q96QH2 718 aa16.11■□□□□ 0.17
HIPK3-201ENST00000303296 TSPY3P0CV98 308 aa16.11■□□□□ 0.17
HIPK3-201ENST00000303296 TSPY8P0CW00 308 aa16.11■□□□□ 0.17
HIPK3-201ENST00000303296 CYLC1P35663 651 aaPredicted RBP16.11■□□□□ 0.17
HIPK3-201ENST00000303296 ZNF131P52739 623 aa16.11■□□□□ 0.17
HIPK3-201ENST00000303296 ERCC6LQ2NKX8 1250 aa16.11■□□□□ 0.17
HIPK3-201ENST00000303296 RAB3IPQ96QF0 476 aaPredicted RBP16.11■□□□□ 0.17
HIPK3-201ENST00000303296 SCAND2PQ9GZW5 306 aaPredicted RBP16.11■□□□□ 0.17
HIPK3-201ENST00000303296 ITIH3Q06033 890 aa16.11■□□□□ 0.17
HIPK3-201ENST00000303296 PPFIBP2Q8ND30 876 aa16.11■□□□□ 0.17
HIPK3-201ENST00000303296 TTC31Q49AM3 519 aaPredicted RBP16.11■□□□□ 0.17
HIPK3-201ENST00000303296 CXorf38Q8TB03 319 aa16.11■□□□□ 0.17
HIPK3-201ENST00000303296 MORC4Q8TE76 937 aa16.11■□□□□ 0.17
HIPK3-201ENST00000303296 SFMBT1Q9UHJ3 866 aa16.11■□□□□ 0.17
HIPK3-201ENST00000303296 PRPHP41219 470 aa16.11■□□□□ 0.17
HIPK3-201ENST00000303296 LACTBP83111 547 aaPredicted RBP16.11■□□□□ 0.17
HIPK3-201ENST00000303296 ARFGAP3Q9NP61 516 aa16.11■□□□□ 0.17
HIPK3-201ENST00000303296 SAMD15Q9P1V8 674 aa16.11■□□□□ 0.17
HIPK3-201ENST00000303296 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.11■□□□□ 0.17
HIPK3-201ENST00000303296 BAG3O95817 575 aa16.1■□□□□ 0.17
HIPK3-201ENST00000303296 TMTC4Q5T4D3 741 aa16.1■□□□□ 0.17
HIPK3-201ENST00000303296 VPS18Q9P253 973 aa16.1■□□□□ 0.17
HIPK3-201ENST00000303296 SPDYE16A6NNV3 312 aaPredicted RBP16.1■□□□□ 0.17
HIPK3-201ENST00000303296 SPDYE2Q495Y8 402 aa16.1■□□□□ 0.17
HIPK3-201ENST00000303296 RSRC1Q96IZ7 334 aaKnown RBP16.1■□□□□ 0.17
HIPK3-201ENST00000303296 STMN1P16949 149 aa16.1■□□□□ 0.17
HIPK3-201ENST00000303296 MCM7P33993 719 aa16.1■□□□□ 0.17
HIPK3-201ENST00000303296 USP16Q9Y5T5 823 aa16.1■□□□□ 0.17
HIPK3-201ENST00000303296 METAP2P50579 478 aaKnown RBP eCLIP16.1■□□□□ 0.17
HIPK3-201ENST00000303296 CLUL1Q15846 466 aa16.1■□□□□ 0.17
HIPK3-201ENST00000303296 CCDC122Q5T0U0 273 aa16.1■□□□□ 0.17
HIPK3-201ENST00000303296 C4orf50Q6ZRC1 276 aa16.1■□□□□ 0.17
HIPK3-201ENST00000303296 NOD1Q9Y239 953 aa16.1■□□□□ 0.17
HIPK3-201ENST00000303296 ZBTB24O43167 697 aaPredicted RBP16.1■□□□□ 0.17
HIPK3-201ENST00000303296 CAPN2P17655 700 aa16.1■□□□□ 0.17
HIPK3-201ENST00000303296 MAN1A1P33908 653 aa16.1■□□□□ 0.17
HIPK3-201ENST00000303296 MAP7Q14244 749 aa16.1■□□□□ 0.17
HIPK3-201ENST00000303296 FAM204AQ9H8W3 233 aa16.1■□□□□ 0.17
HIPK3-201ENST00000303296 PPFIA2O75334 1257 aa16.09■□□□□ 0.17
HIPK3-201ENST00000303296 IARSP41252 1262 aaKnown RBP16.09■□□□□ 0.17
HIPK3-201ENST00000303296 MFSD6Q6ZSS7 791 aa16.09■□□□□ 0.17
HIPK3-201ENST00000303296 KIF1BPQ96EK5 621 aa16.09■□□□□ 0.17
HIPK3-201ENST00000303296 NAA16Q6N069 864 aaPredicted RBP16.09■□□□□ 0.17
HIPK3-201ENST00000303296 LRRC27Q9C0I9 530 aa16.09■□□□□ 0.17
HIPK3-201ENST00000303296 MSANTD4Q8NCY6 345 aa16.09■□□□□ 0.17
HIPK3-201ENST00000303296 CHMP6Q96FZ7 201 aa16.09■□□□□ 0.17
HIPK3-201ENST00000303296 SUDS3Q9H7L9 328 aaPredicted RBP16.09■□□□□ 0.17
HIPK3-201ENST00000303296 VEZTQ9HBM0 779 aa16.09■□□□□ 0.17
HIPK3-201ENST00000303296 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.09■□□□□ 0.17
HIPK3-201ENST00000303296 CTAGE9A4FU28 777 aa16.08■□□□□ 0.17
HIPK3-201ENST00000303296 A0A1B0GUL7 405 aa16.08■□□□□ 0.17
HIPK3-201ENST00000303296 GINS2Q9Y248 185 aa16.08■□□□□ 0.16
HIPK3-201ENST00000303296 XAB2Q9HCS7 855 aaKnown RBP16.08■□□□□ 0.16
HIPK3-201ENST00000303296 CTAGE15A4D2H0 777 aa16.08■□□□□ 0.16
HIPK3-201ENST00000303296 CTAGE8P0CG41 777 aa16.08■□□□□ 0.16
HIPK3-201ENST00000303296 CTAGE4Q8IX94 777 aa16.08■□□□□ 0.16
HIPK3-201ENST00000303296 ZNF830Q96NB3 372 aaPredicted RBP16.08■□□□□ 0.16
HIPK3-201ENST00000303296 GOLIM4O00461 696 aa16.08■□□□□ 0.16
HIPK3-201ENST00000303296 DCAF17Q5H9S7 520 aaPredicted RBP16.08■□□□□ 0.16
HIPK3-201ENST00000303296 CASC4Q6P4E1 433 aa16.08■□□□□ 0.16
HIPK3-201ENST00000303296 CDK19Q9BWU1 502 aa16.08■□□□□ 0.16
HIPK3-201ENST00000303296 MRPL46Q9H2W6 279 aaKnown RBP16.08■□□□□ 0.16
HIPK3-201ENST00000303296 HMGB1P09429 215 aaKnown RBP16.07■□□□□ 0.16
HIPK3-201ENST00000303296 CDR2Q01850 454 aa16.07■□□□□ 0.16
HIPK3-201ENST00000303296 IVLP07476 585 aa16.07■□□□□ 0.16
HIPK3-201ENST00000303296 GJB2P29033 226 aa16.07■□□□□ 0.16
HIPK3-201ENST00000303296 CACNA2D3Q8IZS8 1091 aa16.07■□□□□ 0.16
HIPK3-201ENST00000303296 GTF3C6Q969F1 213 aa16.07■□□□□ 0.16
HIPK3-201ENST00000303296 SNRKQ9NRH2 765 aa16.07■□□□□ 0.16
HIPK3-201ENST00000303296 KANK3Q6NY19 840 aa16.07■□□□□ 0.16
HIPK3-201ENST00000303296 CCDC7Q96M83 1385 aa16.07■□□□□ 0.16
HIPK3-201ENST00000303296 PKD2L1Q9P0L9 805 aa16.07■□□□□ 0.16
HIPK3-201ENST00000303296 LUC7L2Q9Y383 392 aaKnown RBP16.07■□□□□ 0.16
HIPK3-201ENST00000303296 HPDP32754 393 aaPredicted RBP16.06■□□□□ 0.16
HIPK3-201ENST00000303296 IFIT1BQ5T764 474 aaKnown RBP16.06■□□□□ 0.16
HIPK3-201ENST00000303296 SMARCC2Q8TAQ2 1214 aa16.06■□□□□ 0.16
HIPK3-201ENST00000303296 JAKMIP2Q96AA8 810 aa16.06■□□□□ 0.16
HIPK3-201ENST00000303296 TSPYL2Q9H2G4 693 aaPredicted RBP16.06■□□□□ 0.16
HIPK3-201ENST00000303296 RMND1Q9NWS8 449 aa16.06■□□□□ 0.16
HIPK3-201ENST00000303296 RFC4P35249 363 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms