RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 STX6O43752 255 aa11.08□□□□□ -0.63
PRDM9-201ENST00000296682 SYT1P21579 422 aa11.08□□□□□ -0.63
PRDM9-201ENST00000296682 CCDC158Q5M9N0 1113 aa11.08□□□□□ -0.63
PRDM9-201ENST00000296682 BRF1Q92994 677 aa11.08□□□□□ -0.63
PRDM9-201ENST00000296682 PSMA5P28066 241 aa11.08□□□□□ -0.64
PRDM9-201ENST00000296682 DNM1Q05193 864 aaKnown RBP11.08□□□□□ -0.64
PRDM9-201ENST00000296682 PTMSP20962 102 aa11.08□□□□□ -0.64
PRDM9-201ENST00000296682 KLHL40Q2TBA0 621 aa11.08□□□□□ -0.64
PRDM9-201ENST00000296682 TICAM2Q86XR7 235 aa11.08□□□□□ -0.64
PRDM9-201ENST00000296682 LAMB2P55268 1798 aa11.08□□□□□ -0.64
PRDM9-201ENST00000296682 LAMA4Q16363 1823 aa11.08□□□□□ -0.64
PRDM9-201ENST00000296682 SLC27A2O14975 620 aa11.07□□□□□ -0.64
PRDM9-201ENST00000296682 HIP1O00291 1037 aa11.07□□□□□ -0.64
PRDM9-201ENST00000296682 ADORA1P30542 326 aa11.07□□□□□ -0.64
PRDM9-201ENST00000296682 HLFQ16534 295 aa11.07□□□□□ -0.64
PRDM9-201ENST00000296682 ME3Q16798 604 aa11.07□□□□□ -0.64
PRDM9-201ENST00000296682 TTLL5Q6EMB2 1281 aa11.07□□□□□ -0.64
PRDM9-201ENST00000296682 GPT2Q8TD30 523 aa11.07□□□□□ -0.64
PRDM9-201ENST00000296682 CUL4AQ13619 759 aa11.07□□□□□ -0.64
PRDM9-201ENST00000296682 VPS53Q5VIR6 699 aa11.07□□□□□ -0.64
PRDM9-201ENST00000296682 RRP12Q5JTH9 1297 aaKnown RBP11.06□□□□□ -0.64
PRDM9-201ENST00000296682 TMEM63CQ9P1W3 806 aa11.06□□□□□ -0.64
PRDM9-201ENST00000296682 MSNP26038 577 aaKnown RBP11.06□□□□□ -0.64
PRDM9-201ENST00000296682 RRAGDQ9NQL2 400 aaPredicted RBP11.06□□□□□ -0.64
PRDM9-201ENST00000296682 PAG1Q9NWQ8 432 aa11.06□□□□□ -0.64
PRDM9-201ENST00000296682 ZBTB1Q9Y2K1 713 aa11.06□□□□□ -0.64
PRDM9-201ENST00000296682 NRAPQ86VF7 1730 aa11.06□□□□□ -0.64
PRDM9-201ENST00000296682 TAF5LO75529 589 aa11.06□□□□□ -0.64
PRDM9-201ENST00000296682 DNTTIP2Q5QJE6 756 aaKnown RBP11.06□□□□□ -0.64
PRDM9-201ENST00000296682 BICD2Q8TD16 824 aa11.06□□□□□ -0.64
PRDM9-201ENST00000296682 TPCN1Q9ULQ1 816 aa11.06□□□□□ -0.64
PRDM9-201ENST00000296682 PHLPP1O60346 1717 aa11.05□□□□□ -0.64
PRDM9-201ENST00000296682 LRP5O75197 1615 aa11.05□□□□□ -0.64
PRDM9-201ENST00000296682 ATP6V1AP38606 617 aa11.05□□□□□ -0.64
PRDM9-201ENST00000296682 Q6ZUG5 572 aa11.05□□□□□ -0.64
PRDM9-201ENST00000296682 CCDC82Q8N4S0 544 aa11.05□□□□□ -0.64
PRDM9-201ENST00000296682 NEK1Q96PY6 1258 aa11.05□□□□□ -0.64
PRDM9-201ENST00000296682 MPHOSPH8Q99549 860 aa11.05□□□□□ -0.64
PRDM9-201ENST00000296682 ARID3AQ99856 593 aa11.05□□□□□ -0.64
PRDM9-201ENST00000296682 RFX7Q2KHR2 1363 aa11.05□□□□□ -0.64
PRDM9-201ENST00000296682 JAK2O60674 1132 aa11.05□□□□□ -0.64
PRDM9-201ENST00000296682 CCDC144CPQ8IYA2 1237 aa11.05□□□□□ -0.64
PRDM9-201ENST00000296682 SYAP1Q96A49 352 aaPredicted RBP11.05□□□□□ -0.64
PRDM9-201ENST00000296682 RBSNQ9H1K0 784 aa11.05□□□□□ -0.64
PRDM9-201ENST00000296682 NCOA5Q9HCD5 579 aaKnown RBP11.05□□□□□ -0.64
PRDM9-201ENST00000296682 COL14A1Q05707 1796 aaKnown RBP11.05□□□□□ -0.64
PRDM9-201ENST00000296682 EYA2O00167 538 aa11.05□□□□□ -0.64
PRDM9-201ENST00000296682 MCMDC2Q4G0Z9 681 aa11.05□□□□□ -0.64
PRDM9-201ENST00000296682 GIMAP6Q6P9H5 292 aa11.05□□□□□ -0.64
PRDM9-201ENST00000296682 DZIP3Q86Y13 1208 aaKnown RBP11.05□□□□□ -0.64
PRDM9-201ENST00000296682 COL16A1Q07092 1604 aaPredicted RBP11.05□□□□□ -0.64
PRDM9-201ENST00000296682 CASZ1Q86V15 1759 aa11.05□□□□□ -0.64
PRDM9-201ENST00000296682 A0A0G2JLW4 131 aa11.04□□□□□ -0.64
PRDM9-201ENST00000296682 CARD10Q9BWT7 1032 aa11.04□□□□□ -0.64
PRDM9-201ENST00000296682 ABCF2Q9UG63 623 aa11.04□□□□□ -0.64
PRDM9-201ENST00000296682 IRS4O14654 1257 aaPredicted RBP11.04□□□□□ -0.64
PRDM9-201ENST00000296682 ZSCAN22P10073 491 aaPredicted RBP11.04□□□□□ -0.64
PRDM9-201ENST00000296682 APOBRQ0VD83 1088 aa11.04□□□□□ -0.64
PRDM9-201ENST00000296682 COPRSQ9NQ92 184 aa11.04□□□□□ -0.64
PRDM9-201ENST00000296682 RXRAP19793 462 aa11.04□□□□□ -0.64
PRDM9-201ENST00000296682 IL15P40933 162 aaPredicted RBP11.04□□□□□ -0.64
PRDM9-201ENST00000296682 DDB1Q16531 1140 aa11.04□□□□□ -0.64
PRDM9-201ENST00000296682 SLC4A8Q2Y0W8 1093 aa11.04□□□□□ -0.64
PRDM9-201ENST00000296682 CKAP2LQ8IYA6 745 aa11.04□□□□□ -0.64
PRDM9-201ENST00000296682 NGLY1Q96IV0 654 aa11.04□□□□□ -0.64
PRDM9-201ENST00000296682 C8orf37Q96NL8 207 aa11.04□□□□□ -0.64
PRDM9-201ENST00000296682 BCL11BQ9C0K0 894 aaPredicted RBP11.04□□□□□ -0.64
PRDM9-201ENST00000296682 ATP6V1DQ9Y5K8 247 aa11.04□□□□□ -0.64
PRDM9-201ENST00000296682 AHDC1Q5TGY3 1603 aaPredicted RBP11.04□□□□□ -0.64
PRDM9-201ENST00000296682 A0A1B0GUL6 1792 aa11.04□□□□□ -0.64
PRDM9-201ENST00000296682 ERVV-2B6SEH9 535 aa11.03□□□□□ -0.64
PRDM9-201ENST00000296682 BRD1O95696 1058 aa11.03□□□□□ -0.64
PRDM9-201ENST00000296682 ITGA6P23229 1130 aa11.03□□□□□ -0.64
PRDM9-201ENST00000296682 XAGE2Q96GT9 111 aa11.03□□□□□ -0.64
PRDM9-201ENST00000296682 MYH3P11055 1940 aa11.03□□□□□ -0.64
PRDM9-201ENST00000296682 ZAP70P43403 619 aa11.03□□□□□ -0.64
PRDM9-201ENST00000296682 TCIRG1Q13488 830 aa11.03□□□□□ -0.64
PRDM9-201ENST00000296682 INTS4Q96HW7 963 aaKnown RBP11.03□□□□□ -0.64
PRDM9-201ENST00000296682 GREM2Q9H772 168 aa11.03□□□□□ -0.64
PRDM9-201ENST00000296682 JAG2Q9Y219 1238 aa11.03□□□□□ -0.64
PRDM9-201ENST00000296682 KDM4FA0A1W2PPD8 638 aa11.03□□□□□ -0.64
PRDM9-201ENST00000296682 CPLX1O14810 134 aa11.03□□□□□ -0.64
PRDM9-201ENST00000296682 GNL2Q13823 731 aaKnown RBP11.03□□□□□ -0.64
PRDM9-201ENST00000296682 RALYLQ86SE5 291 aaKnown RBP11.03□□□□□ -0.64
PRDM9-201ENST00000296682 CCDC191Q8NCU4 936 aa11.03□□□□□ -0.64
PRDM9-201ENST00000296682 COL5A2P05997 1499 aaPredicted RBP11.02□□□□□ -0.64
PRDM9-201ENST00000296682 MYH7P12883 1935 aa11.02□□□□□ -0.64
PRDM9-201ENST00000296682 NKX1-1Q15270 411 aaPredicted RBP11.02□□□□□ -0.64
PRDM9-201ENST00000296682 ATP2B3Q16720 1220 aa11.02□□□□□ -0.64
PRDM9-201ENST00000296682 GPHNQ9NQX3 736 aaPredicted RBP11.02□□□□□ -0.64
PRDM9-201ENST00000296682 ATG3Q9NT62 314 aa11.02□□□□□ -0.64
PRDM9-201ENST00000296682 ANKRD18BA2A2Z9 1011 aa11.02□□□□□ -0.65
PRDM9-201ENST00000296682 MBD3O95983 291 aa11.02□□□□□ -0.65
PRDM9-201ENST00000296682 ATP5JP18859 108 aa11.02□□□□□ -0.65
PRDM9-201ENST00000296682 ATP2B1P20020 1258 aa11.02□□□□□ -0.65
PRDM9-201ENST00000296682 OTUD7BQ6GQQ9 843 aa11.02□□□□□ -0.65
PRDM9-201ENST00000296682 DRC7Q8IY82 874 aa11.02□□□□□ -0.65
PRDM9-201ENST00000296682 MAP4K1Q92918 833 aa11.02□□□□□ -0.65
PRDM9-201ENST00000296682 MTMR7Q9Y216 660 aa11.02□□□□□ -0.65
PRDM9-201ENST00000296682 FAM98CQ17RN3 349 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms