RNA–Protein interactions for RNA: ENST00000292808.5

ABCF3-201, Transcript of ATP binding cassette subfamily F member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene ABCF3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-201ENST00000292808 TAF7LQ5H9L4 462 aa16.92■□□□□ 0.3
ABCF3-201ENST00000292808 DDX46Q7L014 1031 aaKnown RBP16.92■□□□□ 0.3
ABCF3-201ENST00000292808 ZNF589Q86UQ0 364 aaPredicted RBP16.92■□□□□ 0.3
ABCF3-201ENST00000292808 VGLL2Q8N8G2 317 aa16.92■□□□□ 0.3
ABCF3-201ENST00000292808 KCNB2Q92953 911 aa16.92■□□□□ 0.3
ABCF3-201ENST00000292808 TMX3Q96JJ7 454 aa16.92■□□□□ 0.3
ABCF3-201ENST00000292808 ISY1Q9ULR0 285 aaKnown RBP16.92■□□□□ 0.3
ABCF3-201ENST00000292808 NIP7Q9Y221 180 aaKnown RBP eCLIP16.92■□□□□ 0.3
ABCF3-201ENST00000292808 PARP10Q53GL7 1025 aa16.91■□□□□ 0.3
ABCF3-201ENST00000292808 AK7Q96M32 723 aa16.91■□□□□ 0.3
ABCF3-201ENST00000292808 TRPC5Q9UL62 973 aaPredicted RBP16.91■□□□□ 0.3
ABCF3-201ENST00000292808 PKP1Q13835 747 aa16.9■□□□□ 0.3
ABCF3-201ENST00000292808 LDHAL6AQ6ZMR3 332 aa16.9■□□□□ 0.3
ABCF3-201ENST00000292808 AMIGO3Q86WK7 504 aa16.9■□□□□ 0.3
ABCF3-201ENST00000292808 SEPT12Q8IYM1 358 aa16.9■□□□□ 0.3
ABCF3-201ENST00000292808 XAGE2Q96GT9 111 aa16.9■□□□□ 0.3
ABCF3-201ENST00000292808 BCL2L12Q9HB09 334 aa16.9■□□□□ 0.3
ABCF3-201ENST00000292808 CYP2E1P05181 493 aaPredicted RBP16.9■□□□□ 0.3
ABCF3-201ENST00000292808 NECTIN1Q15223 517 aa16.9■□□□□ 0.3
ABCF3-201ENST00000292808 KBTBD3Q8NAB2 608 aa16.9■□□□□ 0.3
ABCF3-201ENST00000292808 MAP4K1Q92918 833 aa16.9■□□□□ 0.3
ABCF3-201ENST00000292808 ARAP2Q8WZ64 1704 aa16.89■□□□□ 0.3
ABCF3-201ENST00000292808 MCM2P49736 904 aa16.89■□□□□ 0.29
ABCF3-201ENST00000292808 PAG1Q9NWQ8 432 aa16.89■□□□□ 0.29
ABCF3-201ENST00000292808 AKAP11Q9UKA4 1901 aa16.89■□□□□ 0.29
ABCF3-201ENST00000292808 COL24A1Q17RW2 1714 aa16.89■□□□□ 0.29
ABCF3-201ENST00000292808 GOLIM4O00461 696 aa16.89■□□□□ 0.29
ABCF3-201ENST00000292808 RC3H1Q5TC82 1133 aaKnown RBP16.89■□□□□ 0.29
ABCF3-201ENST00000292808 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.89■□□□□ 0.29
ABCF3-201ENST00000292808 AKAP2Q9Y2D5 859 aa16.89■□□□□ 0.29
ABCF3-201ENST00000292808 RBM8AQ9Y5S9 174 aaKnown RBP16.89■□□□□ 0.29
ABCF3-201ENST00000292808 BRWD3Q6RI45 1802 aa16.89■□□□□ 0.29
ABCF3-201ENST00000292808 SLFNL1Q499Z3 407 aa16.88■□□□□ 0.29
ABCF3-201ENST00000292808 METTL24Q5JXM2 366 aa16.88■□□□□ 0.29
ABCF3-201ENST00000292808 PRPF40BQ6NWY9 871 aaKnown RBP16.88■□□□□ 0.29
ABCF3-201ENST00000292808 CLEC4GQ6UXB4 293 aa16.88■□□□□ 0.29
ABCF3-201ENST00000292808 SEC62Q99442 399 aaKnown RBP16.88■□□□□ 0.29
ABCF3-201ENST00000292808 CCNL1Q9UK58 526 aaPredicted RBP16.88■□□□□ 0.29
ABCF3-201ENST00000292808 C4AP0C0L4 1744 aa16.88■□□□□ 0.29
ABCF3-201ENST00000292808 C4BP0C0L5 1744 aa16.88■□□□□ 0.29
ABCF3-201ENST00000292808 IFIT1P09914 478 aaKnown RBP16.88■□□□□ 0.29
ABCF3-201ENST00000292808 XRCC6P12956 609 aaKnown RBP eCLIP16.88■□□□□ 0.29
ABCF3-201ENST00000292808 SCARF1Q14162 830 aa16.88■□□□□ 0.29
ABCF3-201ENST00000292808 TTC14Q96N46 770 aa16.88■□□□□ 0.29
ABCF3-201ENST00000292808 SEC31BQ9NQW1 1179 aa16.88■□□□□ 0.29
ABCF3-201ENST00000292808 GOLGA6L22H0YM25 854 aa16.87■□□□□ 0.29
ABCF3-201ENST00000292808 TAF5LO75529 589 aa16.87■□□□□ 0.29
ABCF3-201ENST00000292808 RPS6KA4O75676 772 aa16.87■□□□□ 0.29
ABCF3-201ENST00000292808 BAG4O95429 457 aaKnown RBP16.87■□□□□ 0.29
ABCF3-201ENST00000292808 ATP2B3Q16720 1220 aa16.87■□□□□ 0.29
ABCF3-201ENST00000292808 ADCK5Q3MIX3 580 aa16.87■□□□□ 0.29
ABCF3-201ENST00000292808 CNNM1Q9NRU3 951 aa16.87■□□□□ 0.29
ABCF3-201ENST00000292808 ZNF652Q9Y2D9 606 aa16.87■□□□□ 0.29
ABCF3-201ENST00000292808 RTL9Q8NET4 1388 aa16.87■□□□□ 0.29
ABCF3-201ENST00000292808 COL9A3Q14050 684 aaPredicted RBP16.86■□□□□ 0.29
ABCF3-201ENST00000292808 CREB3L3Q68CJ9 461 aa16.86■□□□□ 0.29
ABCF3-201ENST00000292808 CCDC129Q6ZRS4 1044 aa16.86■□□□□ 0.29
ABCF3-201ENST00000292808 SRP68Q9UHB9 627 aaKnown RBP16.86■□□□□ 0.29
ABCF3-201ENST00000292808 TAF6LQ9Y6J9 622 aa16.86■□□□□ 0.29
ABCF3-201ENST00000292808 CPA1P15085 419 aa16.86■□□□□ 0.29
ABCF3-201ENST00000292808 MRE11P49959 708 aa16.86■□□□□ 0.29
ABCF3-201ENST00000292808 C3orf67Q6ZVT6 689 aa16.86■□□□□ 0.29
ABCF3-201ENST00000292808 ABCC12Q96J65 1359 aa16.85■□□□□ 0.29
ABCF3-201ENST00000292808 A0A1B0GUL6 1792 aa16.85■□□□□ 0.29
ABCF3-201ENST00000292808 RGL2O15211 777 aa16.85■□□□□ 0.29
ABCF3-201ENST00000292808 GNPATO15228 680 aa16.85■□□□□ 0.29
ABCF3-201ENST00000292808 PDE8BO95263 885 aa16.85■□□□□ 0.29
ABCF3-201ENST00000292808 CUL4AQ13619 759 aa16.85■□□□□ 0.29
ABCF3-201ENST00000292808 TBC1D9BQ66K14 1250 aa16.85■□□□□ 0.29
ABCF3-201ENST00000292808 QTRT2Q9H974 415 aaKnown RBP16.85■□□□□ 0.29
ABCF3-201ENST00000292808 NARFQ9UHQ1 456 aa16.85■□□□□ 0.29
ABCF3-201ENST00000292808 TAF1P21675 1872 aa16.85■□□□□ 0.29
ABCF3-201ENST00000292808 SLC27A2O14975 620 aa16.85■□□□□ 0.29
ABCF3-201ENST00000292808 ERFEQ4G0M1 354 aa16.85■□□□□ 0.29
ABCF3-201ENST00000292808 TTC39AQ5SRH9 613 aa16.85■□□□□ 0.29
ABCF3-201ENST00000292808 FOXD4L5Q5VV16 416 aaPredicted RBP16.85■□□□□ 0.29
ABCF3-201ENST00000292808 USPL1Q5W0Q7 1092 aa16.85■□□□□ 0.29
ABCF3-201ENST00000292808 PI16Q6UXB8 463 aa16.85■□□□□ 0.29
ABCF3-201ENST00000292808 FOXD4L4Q8WXT5 416 aaPredicted RBP16.85■□□□□ 0.29
ABCF3-201ENST00000292808 RPAP1Q9BWH6 1393 aaPredicted RBP16.84■□□□□ 0.29
ABCF3-201ENST00000292808 FGFR2P21802 821 aa16.84■□□□□ 0.29
ABCF3-201ENST00000292808 CCDC158Q5M9N0 1113 aa16.84■□□□□ 0.29
ABCF3-201ENST00000292808 MCTP1Q6DN14 999 aa16.84■□□□□ 0.29
ABCF3-201ENST00000292808 MCMDC2Q4G0Z9 681 aa16.84■□□□□ 0.29
ABCF3-201ENST00000292808 ZDHHC9Q9Y397 364 aa16.84■□□□□ 0.29
ABCF3-201ENST00000292808 MYH7P12883 1935 aa16.84■□□□□ 0.29
ABCF3-201ENST00000292808 ZMYM1Q5SVZ6 1142 aa16.83■□□□□ 0.28
ABCF3-201ENST00000292808 HELBQ8NG08 1087 aaPredicted RBP16.83■□□□□ 0.28
ABCF3-201ENST00000292808 LARP6Q9BRS8 491 aaKnown RBP16.83■□□□□ 0.28
ABCF3-201ENST00000292808 ZSWIM6Q9HCJ5 1215 aa16.83■□□□□ 0.28
ABCF3-201ENST00000292808 MYO5AQ9Y4I1 1855 aaKnown RBP16.83■□□□□ 0.28
ABCF3-201ENST00000292808 CASTP20810 708 aaKnown RBP16.82■□□□□ 0.28
ABCF3-201ENST00000292808 CCDC152Q4G0S7 254 aa16.82■□□□□ 0.28
ABCF3-201ENST00000292808 GORABQ5T7V8 394 aa16.82■□□□□ 0.28
ABCF3-201ENST00000292808 JAKMIP1Q96N16 626 aaKnown RBP16.82■□□□□ 0.28
ABCF3-201ENST00000292808 TM6SF1Q9BZW5 370 aa16.82■□□□□ 0.28
ABCF3-201ENST00000292808 LRRC4BQ9NT99 713 aa16.82■□□□□ 0.28
ABCF3-201ENST00000292808 MROH5Q6ZUA9 1318 aa16.82■□□□□ 0.28
ABCF3-201ENST00000292808 MCAMP43121 646 aa16.82■□□□□ 0.28
ABCF3-201ENST00000292808 ZAP70P43403 619 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms