RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 LUZP1Q86V48 1076 aa13.97□□□□□ -0.17
SPG11-201ENST00000261866 DTNBO60941 627 aa13.96□□□□□ -0.17
SPG11-201ENST00000261866 TICAM2Q86XR7 235 aa13.96□□□□□ -0.17
SPG11-201ENST00000261866 KLHDC4Q8TBB5 520 aa13.96□□□□□ -0.17
SPG11-201ENST00000261866 POLKQ9UBT6 870 aa13.96□□□□□ -0.17
SPG11-201ENST00000261866 EZRP15311 586 aaKnown RBP13.96□□□□□ -0.17
SPG11-201ENST00000261866 DNAI2Q9GZS0 605 aa13.96□□□□□ -0.17
SPG11-201ENST00000261866 EXOC1Q9NV70 894 aa13.96□□□□□ -0.17
SPG11-201ENST00000261866 LMOD1P29536 600 aaPredicted RBP13.96□□□□□ -0.17
SPG11-201ENST00000261866 FNBP4Q8N3X1 1017 aaPredicted RBP13.96□□□□□ -0.17
SPG11-201ENST00000261866 DYDC1Q8WWB3 177 aa13.96□□□□□ -0.17
SPG11-201ENST00000261866 PHACTR3Q96KR7 559 aa13.96□□□□□ -0.17
SPG11-201ENST00000261866 C19orf44Q9H6X5 657 aa13.96□□□□□ -0.17
SPG11-201ENST00000261866 CETN2P41208 172 aa13.96□□□□□ -0.17
SPG11-201ENST00000261866 ZNF594Q96JF6 807 aaPredicted RBP13.96□□□□□ -0.17
SPG11-201ENST00000261866 ERLIN1O75477 346 aa13.96□□□□□ -0.18
SPG11-201ENST00000261866 UFL1O94874 794 aa13.96□□□□□ -0.18
SPG11-201ENST00000261866 RRAGBQ5VZM2 374 aa13.96□□□□□ -0.18
SPG11-201ENST00000261866 IQCEQ6IPM2 695 aa13.96□□□□□ -0.18
SPG11-201ENST00000261866 SYNCQ9H7C4 482 aa13.96□□□□□ -0.18
SPG11-201ENST00000261866 TTC21AQ8NDW8 1320 aa13.95□□□□□ -0.18
SPG11-201ENST00000261866 TNNI2P48788 182 aa13.95□□□□□ -0.18
SPG11-201ENST00000261866 VPS36Q86VN1 386 aa13.95□□□□□ -0.18
SPG11-201ENST00000261866 MRPL50Q8N5N7 158 aaKnown RBP13.95□□□□□ -0.18
SPG11-201ENST00000261866 HOXC9P31274 260 aa13.95□□□□□ -0.18
SPG11-201ENST00000261866 PHACTR2O75167 634 aa13.95□□□□□ -0.18
SPG11-201ENST00000261866 TAF5LO75529 589 aa13.95□□□□□ -0.18
SPG11-201ENST00000261866 ARID5AQ03989 594 aa13.95□□□□□ -0.18
SPG11-201ENST00000261866 ESR2Q92731 530 aa13.95□□□□□ -0.18
SPG11-201ENST00000261866 TRIM47Q96LD4 638 aa13.95□□□□□ -0.18
SPG11-201ENST00000261866 ZSWIM4Q9H7M6 989 aa13.95□□□□□ -0.18
SPG11-201ENST00000261866 STAT6P42226 847 aa13.95□□□□□ -0.18
SPG11-201ENST00000261866 KIF5CO60282 957 aa13.95□□□□□ -0.18
SPG11-201ENST00000261866 CNPY2Q9Y2B0 182 aa13.95□□□□□ -0.18
SPG11-201ENST00000261866 MCMDC2Q4G0Z9 681 aa13.95□□□□□ -0.18
SPG11-201ENST00000261866 GIMAP6Q6P9H5 292 aa13.95□□□□□ -0.18
SPG11-201ENST00000261866 TCHPQ9BT92 498 aa13.95□□□□□ -0.18
SPG11-201ENST00000261866 KRT23Q9C075 422 aa13.95□□□□□ -0.18
SPG11-201ENST00000261866 A2MP01023 1474 aa13.94□□□□□ -0.18
SPG11-201ENST00000261866 TMEM110-MUSTN1A8MSY1 372 aa13.94□□□□□ -0.18
SPG11-201ENST00000261866 TRERF1Q96PN7 1200 aa13.94□□□□□ -0.18
SPG11-201ENST00000261866 MPHOSPH6Q99547 160 aaKnown RBP13.94□□□□□ -0.18
SPG11-201ENST00000261866 AMPD3Q01432 767 aa13.94□□□□□ -0.18
SPG11-201ENST00000261866 GPCPD1Q9NPB8 672 aa13.94□□□□□ -0.18
SPG11-201ENST00000261866 LDHBP07195 334 aaKnown RBP13.94□□□□□ -0.18
SPG11-201ENST00000261866 APOBRQ0VD83 1088 aa13.94□□□□□ -0.18
SPG11-201ENST00000261866 CCDC174Q6PII3 467 aa13.94□□□□□ -0.18
SPG11-201ENST00000261866 RBM17Q96I25 401 aaKnown RBP13.94□□□□□ -0.18
SPG11-201ENST00000261866 TRAPPC8Q9Y2L5 1435 aa13.94□□□□□ -0.18
SPG11-201ENST00000261866 FAM170AA1A519 330 aa13.94□□□□□ -0.18
SPG11-201ENST00000261866 MCM7P33993 719 aa13.94□□□□□ -0.18
SPG11-201ENST00000261866 CCDC129Q6ZRS4 1044 aa13.94□□□□□ -0.18
SPG11-201ENST00000261866 GPATCH8Q9UKJ3 1502 aaKnown RBP13.94□□□□□ -0.18
SPG11-201ENST00000261866 CNBD1Q8NA66 436 aa13.94□□□□□ -0.18
SPG11-201ENST00000261866 FGFR1OPO95684 399 aaKnown RBP13.94□□□□□ -0.18
SPG11-201ENST00000261866 ZGPATQ8N5A5 531 aaKnown RBP13.94□□□□□ -0.18
SPG11-201ENST00000261866 NDUFB9Q9Y6M9 179 aa13.94□□□□□ -0.18
SPG11-201ENST00000261866 RNMTO43148 476 aaKnown RBP13.93□□□□□ -0.18
SPG11-201ENST00000261866 YEATS4O95619 227 aa13.93□□□□□ -0.18
SPG11-201ENST00000261866 NPATQ14207 1427 aa13.93□□□□□ -0.18
SPG11-201ENST00000261866 MRVI1Q9Y6F6 885 aa13.93□□□□□ -0.18
SPG11-201ENST00000261866 MAP2K1Q02750 393 aaPredicted RBP13.93□□□□□ -0.18
SPG11-201ENST00000261866 PRDM10Q9NQV6 1147 aa13.93□□□□□ -0.18
SPG11-201ENST00000261866 RNF216Q9NWF9 866 aaPredicted RBP13.93□□□□□ -0.18
SPG11-201ENST00000261866 IFFO1Q0D2I5 559 aa13.93□□□□□ -0.18
SPG11-201ENST00000261866 PTPN14Q15678 1187 aa13.93□□□□□ -0.18
SPG11-201ENST00000261866 C16orf45Q96MC5 204 aaPredicted RBP13.93□□□□□ -0.18
SPG11-201ENST00000261866 STK32BQ9NY57 414 aa13.93□□□□□ -0.18
SPG11-201ENST00000261866 PRIM1P49642 420 aaKnown RBP13.93□□□□□ -0.18
SPG11-201ENST00000261866 EAPPQ56P03 285 aaPredicted RBP13.93□□□□□ -0.18
SPG11-201ENST00000261866 TCP10Q12799 353 aa13.93□□□□□ -0.18
SPG11-201ENST00000261866 ABCC1P33527 1531 aa13.92□□□□□ -0.18
SPG11-201ENST00000261866 APBA3O96018 575 aa13.92□□□□□ -0.18
SPG11-201ENST00000261866 RAPGEF6Q8TEU7 1601 aa13.92□□□□□ -0.18
SPG11-201ENST00000261866 DHX58Q96C10 678 aa13.92□□□□□ -0.18
SPG11-201ENST00000261866 PLCH2O75038 1416 aa13.92□□□□□ -0.18
SPG11-201ENST00000261866 CHMP2AO43633 222 aa13.92□□□□□ -0.18
SPG11-201ENST00000261866 HARSP12081 509 aaKnown RBP13.92□□□□□ -0.18
SPG11-201ENST00000261866 LMAN1P49257 510 aa13.92□□□□□ -0.18
SPG11-201ENST00000261866 CIZ1Q9ULV3 898 aaPredicted RBP13.92□□□□□ -0.18
SPG11-201ENST00000261866 PCDHB15Q9Y5E8 787 aa13.92□□□□□ -0.18
SPG11-201ENST00000261866 ARL1P40616 181 aaPredicted RBP13.92□□□□□ -0.18
SPG11-201ENST00000261866 IL15P40933 162 aaPredicted RBP13.92□□□□□ -0.18
SPG11-201ENST00000261866 PDE1AP54750 535 aa13.92□□□□□ -0.18
SPG11-201ENST00000261866 CETN1Q12798 172 aa13.92□□□□□ -0.18
SPG11-201ENST00000261866 UBXN4Q92575 508 aa13.92□□□□□ -0.18
SPG11-201ENST00000261866 ATP10BO94823 1461 aa13.92□□□□□ -0.18
SPG11-201ENST00000261866 PCDH11XQ9BZA7 1347 aa13.92□□□□□ -0.18
SPG11-201ENST00000261866 PCDH11YQ9BZA8 1340 aa13.92□□□□□ -0.18
SPG11-201ENST00000261866 NSD2O96028 1365 aa13.92□□□□□ -0.18
SPG11-201ENST00000261866 PTGS1P23219 599 aa13.91□□□□□ -0.18
SPG11-201ENST00000261866 TMX3Q96JJ7 454 aa13.91□□□□□ -0.18
SPG11-201ENST00000261866 SMC1AQ14683 1233 aaKnown RBP13.91□□□□□ -0.18
SPG11-201ENST00000261866 NUCB1Q02818 461 aa13.91□□□□□ -0.18
SPG11-201ENST00000261866 A1BGP04217 495 aa13.91□□□□□ -0.18
SPG11-201ENST00000261866 G2E3Q7L622 706 aa13.91□□□□□ -0.18
SPG11-201ENST00000261866 ZNF830Q96NB3 372 aaPredicted RBP13.91□□□□□ -0.18
SPG11-201ENST00000261866 ZMYM3Q14202 1370 aa13.91□□□□□ -0.18
SPG11-201ENST00000261866 BICRAQ9NZM4 1560 aa13.91□□□□□ -0.18
SPG11-201ENST00000261866 CPA1P15085 419 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms