RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 KCNV1Q6PIU1 500 aa9.75□□□□□ -0.85
SPARC-201ENST00000231061 TBC1D9Q6ZT07 1266 aa9.75□□□□□ -0.85
SPARC-201ENST00000231061 STAG2Q8N3U4 1231 aa9.75□□□□□ -0.85
SPARC-201ENST00000231061 NACA2Q9H009 215 aa9.75□□□□□ -0.85
SPARC-201ENST00000231061 CD248Q9HCU0 757 aa9.75□□□□□ -0.85
SPARC-201ENST00000231061 BLOC1S6Q9UL45 172 aa9.75□□□□□ -0.85
SPARC-201ENST00000231061 GJA3Q9Y6H8 435 aa9.75□□□□□ -0.85
SPARC-201ENST00000231061 MAGEA8P43361 318 aa9.74□□□□□ -0.85
SPARC-201ENST00000231061 WWC2Q6AWC2 1192 aa9.74□□□□□ -0.85
SPARC-201ENST00000231061 HMGB1P1B2RPK0 211 aaPredicted RBP9.74□□□□□ -0.85
SPARC-201ENST00000231061 MYO1BO43795 1136 aa9.74□□□□□ -0.85
SPARC-201ENST00000231061 SMARCA1P28370 1054 aa9.74□□□□□ -0.85
SPARC-201ENST00000231061 ANKRD20A12PQ8NF67 263 aa9.74□□□□□ -0.85
SPARC-201ENST00000231061 ARHGAP45Q92619 1136 aa9.74□□□□□ -0.85
SPARC-201ENST00000231061 BICD1Q96G01 975 aa9.74□□□□□ -0.85
SPARC-201ENST00000231061 VMP1Q96GC9 406 aa9.74□□□□□ -0.85
SPARC-201ENST00000231061 CEP89Q96ST8 783 aa9.74□□□□□ -0.85
SPARC-201ENST00000231061 TBC1D7Q9P0N9 293 aa9.74□□□□□ -0.85
SPARC-201ENST00000231061 ABCF2Q9UG63 623 aa9.74□□□□□ -0.85
SPARC-201ENST00000231061 ANKRD18BA2A2Z9 1011 aa9.74□□□□□ -0.85
SPARC-201ENST00000231061 KANK3Q6NY19 840 aa9.74□□□□□ -0.85
SPARC-201ENST00000231061 MYO1HQ8N1T3 1032 aa9.74□□□□□ -0.85
SPARC-201ENST00000231061 IQCGQ9H095 443 aaKnown RBP9.74□□□□□ -0.85
SPARC-201ENST00000231061 ANKRD26Q9UPS8 1709 aa9.74□□□□□ -0.85
SPARC-201ENST00000231061 CDC37Q16543 378 aaPredicted RBP9.73□□□□□ -0.85
SPARC-201ENST00000231061 JARID2Q92833 1246 aaPredicted RBP9.73□□□□□ -0.85
SPARC-201ENST00000231061 MRFAP1L1Q96HT8 127 aa9.73□□□□□ -0.85
SPARC-201ENST00000231061 GBP4Q96PP9 640 aa9.73□□□□□ -0.85
SPARC-201ENST00000231061 MPHOSPH6Q99547 160 aaKnown RBP9.73□□□□□ -0.85
SPARC-201ENST00000231061 RBM42Q9BTD8 480 aaKnown RBP9.73□□□□□ -0.85
SPARC-201ENST00000231061 MUC3BQ9H195 1237 aa9.73□□□□□ -0.85
SPARC-201ENST00000231061 UTP6Q9NYH9 597 aaKnown RBP9.73□□□□□ -0.85
SPARC-201ENST00000231061 TMEM63CQ9P1W3 806 aa9.73□□□□□ -0.85
SPARC-201ENST00000231061 ARIH1Q9Y4X5 557 aaPredicted RBP9.73□□□□□ -0.85
SPARC-201ENST00000231061 ATP7BP35670 1465 aa9.73□□□□□ -0.85
SPARC-201ENST00000231061 CCDC196A0A1B0GTZ2 297 aa9.73□□□□□ -0.85
SPARC-201ENST00000231061 CDC45O75419 566 aa9.73□□□□□ -0.85
SPARC-201ENST00000231061 VASPP50552 380 aaPredicted RBP9.73□□□□□ -0.85
SPARC-201ENST00000231061 LLGL2Q6P1M3 1020 aa9.73□□□□□ -0.85
SPARC-201ENST00000231061 DPH6Q7L8W6 267 aa9.73□□□□□ -0.85
SPARC-201ENST00000231061 RICTORQ6R327 1708 aa9.73□□□□□ -0.85
SPARC-201ENST00000231061 KIF20BQ96Q89 1820 aa9.73□□□□□ -0.85
SPARC-201ENST00000231061 SKIV2LQ15477 1246 aaKnown RBP9.73□□□□□ -0.85
SPARC-201ENST00000231061 HHATQ5VTY9 493 aa9.73□□□□□ -0.85
SPARC-201ENST00000231061 SIRT2Q8IXJ6 389 aa9.73□□□□□ -0.85
SPARC-201ENST00000231061 CHCHD4Q8N4Q1 142 aa9.73□□□□□ -0.85
SPARC-201ENST00000231061 CDC5LQ99459 802 aaKnown RBP9.73□□□□□ -0.85
SPARC-201ENST00000231061 EDC4Q6P2E9 1401 aaKnown RBP9.73□□□□□ -0.85
SPARC-201ENST00000231061 ABCC4O15439 1325 aa9.73□□□□□ -0.85
SPARC-201ENST00000231061 CLTCQ00610 1675 aaKnown RBP9.73□□□□□ -0.85
SPARC-201ENST00000231061 HDLBPQ00341 1268 aaKnown RBP9.72□□□□□ -0.85
SPARC-201ENST00000231061 PSME1Q06323 249 aa9.72□□□□□ -0.85
SPARC-201ENST00000231061 KRT24Q2M2I5 525 aa9.72□□□□□ -0.85
SPARC-201ENST00000231061 SULT6B1Q6IMI4 303 aa9.72□□□□□ -0.85
SPARC-201ENST00000231061 SNX21Q969T3 373 aa9.72□□□□□ -0.85
SPARC-201ENST00000231061 FEZ1Q99689 392 aa9.72□□□□□ -0.85
SPARC-201ENST00000231061 PTCH1Q13635 1447 aa9.72□□□□□ -0.85
SPARC-201ENST00000231061 CBFA2T2O43439 604 aa9.72□□□□□ -0.85
SPARC-201ENST00000231061 HIP1RO75146 1068 aa9.72□□□□□ -0.85
SPARC-201ENST00000231061 PRIM1P49642 420 aaKnown RBP9.72□□□□□ -0.85
SPARC-201ENST00000231061 ALKBH2Q6NS38 261 aa9.72□□□□□ -0.85
SPARC-201ENST00000231061 SYNE3Q6ZMZ3 975 aa9.72□□□□□ -0.85
SPARC-201ENST00000231061 CCDC61Q9Y6R9 512 aa9.72□□□□□ -0.85
SPARC-201ENST00000231061 HOXA2O43364 376 aa9.72□□□□□ -0.85
SPARC-201ENST00000231061 U2AF2P26368 475 aaKnown RBP eCLIP9.72□□□□□ -0.85
SPARC-201ENST00000231061 POU5F1Q01860 360 aaKnown RBP9.72□□□□□ -0.85
SPARC-201ENST00000231061 ARMC9Q7Z3E5 817 aa9.72□□□□□ -0.85
SPARC-201ENST00000231061 FSD2A1L4K1 749 aa9.71□□□□□ -0.85
SPARC-201ENST00000231061 ZBED6P86452 979 aa9.71□□□□□ -0.85
SPARC-201ENST00000231061 SLX1AQ9BQ83 275 aa9.71□□□□□ -0.85
SPARC-201ENST00000231061 ANKRD33BA6NCL7 494 aa9.71□□□□□ -0.85
SPARC-201ENST00000231061 K7ELQ4 463 aaPredicted RBP9.71□□□□□ -0.85
SPARC-201ENST00000231061 CD2BP2O95400 341 aaKnown RBP9.71□□□□□ -0.85
SPARC-201ENST00000231061 EIF5P55010 431 aaKnown RBP9.71□□□□□ -0.85
SPARC-201ENST00000231061 PTK7Q13308 1070 aa9.71□□□□□ -0.85
SPARC-201ENST00000231061 CCDC178Q5BJE1 867 aa9.71□□□□□ -0.85
SPARC-201ENST00000231061 MCM10Q7L590 875 aa9.71□□□□□ -0.85
SPARC-201ENST00000231061 TBC1D22AQ8WUA7 517 aa9.71□□□□□ -0.85
SPARC-201ENST00000231061 TEX13AQ9BXU3 409 aaPredicted RBP9.71□□□□□ -0.85
SPARC-201ENST00000231061 TFIP11Q9UBB9 837 aaKnown RBP9.71□□□□□ -0.85
SPARC-201ENST00000231061 A2ML1A8K2U0 1454 aa9.71□□□□□ -0.86
SPARC-201ENST00000231061 hCG_2014768A0A024R1R8 64 aa9.71□□□□□ -0.86
SPARC-201ENST00000231061 TRPC1P48995 793 aa9.71□□□□□ -0.86
SPARC-201ENST00000231061 XPCQ01831 940 aaPredicted RBP9.71□□□□□ -0.86
SPARC-201ENST00000231061 MCTP2Q6DN12 878 aa9.71□□□□□ -0.86
SPARC-201ENST00000231061 LARP6Q9BRS8 491 aaKnown RBP9.71□□□□□ -0.86
SPARC-201ENST00000231061 THRAP3Q9Y2W1 955 aaKnown RBP9.71□□□□□ -0.86
SPARC-201ENST00000231061 MRFAP1Q9Y605 127 aa9.71□□□□□ -0.86
SPARC-201ENST00000231061 SLFN14P0C7P3 912 aa9.7□□□□□ -0.86
SPARC-201ENST00000231061 ATICP31939 592 aa9.7□□□□□ -0.86
SPARC-201ENST00000231061 PEX19P40855 299 aa9.7□□□□□ -0.86
SPARC-201ENST00000231061 GABPB1Q06547 395 aaPredicted RBP9.7□□□□□ -0.86
SPARC-201ENST00000231061 SFMBT1Q9UHJ3 866 aa9.7□□□□□ -0.86
SPARC-201ENST00000231061 IVNS1ABPQ9Y6Y0 642 aa9.7□□□□□ -0.86
SPARC-201ENST00000231061 METP08581 1390 aa9.7□□□□□ -0.86
SPARC-201ENST00000231061 CDC42BPGQ6DT37 1551 aa9.7□□□□□ -0.86
SPARC-201ENST00000231061 AP1G2O75843 785 aa9.7□□□□□ -0.86
SPARC-201ENST00000231061 TRDNQ13061 729 aa9.7□□□□□ -0.86
SPARC-201ENST00000231061 C16orf71Q8IYS4 520 aaPredicted RBP9.7□□□□□ -0.86
SPARC-201ENST00000231061 VEZTQ9HBM0 779 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms