RNA–Protein interactions for RNA: ENSMUST00000221041.1

Trim9-205, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 3,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-205ENSMUST00000221041 Cnpy2Q9QXT0 182 aa12.34□□□□□ -0.43
Trim9-205ENSMUST00000221041 SfswapQ3USH5 945 aaKnown RBP12.34□□□□□ -0.43
Trim9-205ENSMUST00000221041 Prpf4bQ61136 1007 aaKnown RBP12.34□□□□□ -0.43
Trim9-205ENSMUST00000221041 CpvlQ9D3S9 478 aa12.34□□□□□ -0.43
Trim9-205ENSMUST00000221041 Mybbp1aQ7TPV4 1344 aaKnown RBP12.34□□□□□ -0.43
Trim9-205ENSMUST00000221041 Mst1rQ62190 1378 aa12.34□□□□□ -0.43
Trim9-205ENSMUST00000221041 Abcc12Q80WJ6 1366 aa12.34□□□□□ -0.43
Trim9-205ENSMUST00000221041 Ces1hD3Z298 562 aa12.34□□□□□ -0.43
Trim9-205ENSMUST00000221041 Gm29094F6Q785 221 aa12.34□□□□□ -0.43
Trim9-205ENSMUST00000221041 Ppp4r3aQ6P2K6 820 aa12.34□□□□□ -0.43
Trim9-205ENSMUST00000221041 Ano6Q6P9J9 911 aa12.34□□□□□ -0.43
Trim9-205ENSMUST00000221041 Tmem266Q8BZB3 538 aa12.34□□□□□ -0.43
Trim9-205ENSMUST00000221041 Tubb6Q922F4 447 aa12.34□□□□□ -0.43
Trim9-205ENSMUST00000221041 MthfsQ9D110 203 aa12.34□□□□□ -0.43
Trim9-205ENSMUST00000221041 NapbP28663 298 aa12.33□□□□□ -0.43
Trim9-205ENSMUST00000221041 TbcaP48428 108 aaKnown RBP12.33□□□□□ -0.43
Trim9-205ENSMUST00000221041 Hvcn1Q3U2S8 269 aa12.33□□□□□ -0.43
Trim9-205ENSMUST00000221041 DpydQ8CHR6 1025 aa12.33□□□□□ -0.43
Trim9-205ENSMUST00000221041 Kif20bQ80WE4 1774 aaKnown RBP12.33□□□□□ -0.44
Trim9-205ENSMUST00000221041 Hspd1P63038 573 aaKnown RBP12.33□□□□□ -0.44
Trim9-205ENSMUST00000221041 Srek1Q8BZX4 494 aaKnown RBP12.33□□□□□ -0.44
Trim9-205ENSMUST00000221041 Casp1P29452 402 aa12.33□□□□□ -0.44
Trim9-205ENSMUST00000221041 Dnm1P39053 867 aa12.33□□□□□ -0.44
Trim9-205ENSMUST00000221041 LyarQ08288 388 aaKnown RBP12.33□□□□□ -0.44
Trim9-205ENSMUST00000221041 Ctdnep1Q3TP92 244 aa12.33□□□□□ -0.44
Trim9-205ENSMUST00000221041 Zfp51Q3U4L8 781 aa12.33□□□□□ -0.44
Trim9-205ENSMUST00000221041 Add2Q9QYB8 725 aa12.33□□□□□ -0.44
Trim9-205ENSMUST00000221041 Cyb5rlB1AS42 316 aa12.32□□□□□ -0.44
Trim9-205ENSMUST00000221041 Ftl2P49945 183 aa12.32□□□□□ -0.44
Trim9-205ENSMUST00000221041 NfkbibQ60778 359 aa12.32□□□□□ -0.44
Trim9-205ENSMUST00000221041 CtcfQ61164 736 aaKnown RBP12.32□□□□□ -0.44
Trim9-205ENSMUST00000221041 Eno4Q8C042 619 aa12.32□□□□□ -0.44
Trim9-205ENSMUST00000221041 Ltb4r2Q9JJL9 360 aa12.32□□□□□ -0.44
Trim9-205ENSMUST00000221041 Pde4bB1AWC9 736 aa12.32□□□□□ -0.44
Trim9-205ENSMUST00000221041 TsksO54887 585 aa12.32□□□□□ -0.44
Trim9-205ENSMUST00000221041 Acnat2Q8BGG9 420 aa12.32□□□□□ -0.44
Trim9-205ENSMUST00000221041 ImmtQ8CAQ8 757 aaKnown RBP12.32□□□□□ -0.44
Trim9-205ENSMUST00000221041 Popdc2Q9ES82 367 aa12.32□□□□□ -0.44
Trim9-205ENSMUST00000221041 Nlrp9bQ66X22 1003 aa12.31□□□□□ -0.44
Trim9-205ENSMUST00000221041 Psrc1Q9D0P7 329 aa12.31□□□□□ -0.44
Trim9-205ENSMUST00000221041 Hmgn5Q9JL35 406 aa12.31□□□□□ -0.44
Trim9-205ENSMUST00000221041 Prl3d2F6R3P9 224 aa12.31□□□□□ -0.44
Trim9-205ENSMUST00000221041 Gpr182P43142 395 aa12.31□□□□□ -0.44
Trim9-205ENSMUST00000221041 Znf653Q6YND2 615 aa12.31□□□□□ -0.44
Trim9-205ENSMUST00000221041 Dcaf5Q80T85 946 aa12.31□□□□□ -0.44
Trim9-205ENSMUST00000221041 Ints5Q8CHT3 1018 aa12.31□□□□□ -0.44
Trim9-205ENSMUST00000221041 Tmc2Q8R4P4 888 aa12.31□□□□□ -0.44
Trim9-205ENSMUST00000221041 Tmem143Q8VD26 458 aa12.31□□□□□ -0.44
Trim9-205ENSMUST00000221041 Klc3Q91W40 508 aa12.31□□□□□ -0.44
Trim9-205ENSMUST00000221041 Rdm1Q9CQK3 281 aa12.31□□□□□ -0.44
Trim9-205ENSMUST00000221041 Zbtb1Q91VL9 713 aa12.31□□□□□ -0.44
Trim9-205ENSMUST00000221041 Lrrc59Q922Q8 307 aaKnown RBP12.31□□□□□ -0.44
Trim9-205ENSMUST00000221041 Flt4P35917 1363 aa12.31□□□□□ -0.44
Trim9-205ENSMUST00000221041 SdsQ8VBT2 327 aa12.3□□□□□ -0.44
Trim9-205ENSMUST00000221041 Nfe2l3Q9WTM4 660 aa12.3□□□□□ -0.44
Trim9-205ENSMUST00000221041 Spef2Q8C9J3 1734 aa12.3□□□□□ -0.44
Trim9-205ENSMUST00000221041 Nlrp9aQ66X03 949 aa12.3□□□□□ -0.44
Trim9-205ENSMUST00000221041 Dmrt2Q8BG36 561 aa12.3□□□□□ -0.44
Trim9-205ENSMUST00000221041 Slfnl1Q8BHW9 410 aa12.3□□□□□ -0.44
Trim9-205ENSMUST00000221041 Zfp113Q8C689 439 aa12.3□□□□□ -0.44
Trim9-205ENSMUST00000221041 Chrna2Q91X60 512 aa12.3□□□□□ -0.44
Trim9-205ENSMUST00000221041 Simc1E9Q6E9 1354 aa12.3□□□□□ -0.44
Trim9-205ENSMUST00000221041 Zscan29E9Q5B4 869 aa12.3□□□□□ -0.44
Trim9-205ENSMUST00000221041 Tpm2P58774 284 aa12.3□□□□□ -0.44
Trim9-205ENSMUST00000221041 Itga6Q61739 1091 aa12.3□□□□□ -0.44
Trim9-205ENSMUST00000221041 Bsdc1Q80Y55 427 aa12.3□□□□□ -0.44
Trim9-205ENSMUST00000221041 Nop14Q8R3N1 860 aaKnown RBP12.3□□□□□ -0.44
Trim9-205ENSMUST00000221041 Terf2ipQ91VL8 393 aa12.3□□□□□ -0.44
Trim9-205ENSMUST00000221041 Cdc45Q9Z1X9 566 aa12.3□□□□□ -0.44
Trim9-205ENSMUST00000221041 PplQ9R269 1755 aa12.3□□□□□ -0.44
Trim9-205ENSMUST00000221041 Zc3h13E9Q784 1729 aaKnown RBP12.29□□□□□ -0.44
Trim9-205ENSMUST00000221041 Ift172Q6VH22 1749 aa12.29□□□□□ -0.44
Trim9-205ENSMUST00000221041 Cadps2Q8BYR5 1297 aa12.29□□□□□ -0.44
Trim9-205ENSMUST00000221041 Mb21d2Q8C525 428 aa12.29□□□□□ -0.44
Trim9-205ENSMUST00000221041 Plcd1Q8R3B1 756 aa12.29□□□□□ -0.44
Trim9-205ENSMUST00000221041 Pik3ap1Q9EQ32 811 aa12.29□□□□□ -0.44
Trim9-205ENSMUST00000221041 Ccne2Q9Z238 404 aa12.29□□□□□ -0.44
Trim9-205ENSMUST00000221041 Hdac6Q9Z2V5 1149 aa12.29□□□□□ -0.44
Trim9-205ENSMUST00000221041 Slit3Q9WVB4 1523 aa12.29□□□□□ -0.44
Trim9-205ENSMUST00000221041 Ccdc112A0AUP1 442 aa12.29□□□□□ -0.44
Trim9-205ENSMUST00000221041 Bach2P97303 839 aa12.29□□□□□ -0.44
Trim9-205ENSMUST00000221041 Nlrp1aQ2LKU9 1182 aa12.29□□□□□ -0.44
Trim9-205ENSMUST00000221041 Krt84Q99M73 603 aa12.29□□□□□ -0.44
Trim9-205ENSMUST00000221041 Gm21969J3QJZ1 289 aa12.29□□□□□ -0.44
Trim9-205ENSMUST00000221041 Metap2O08663 478 aaKnown RBP12.29□□□□□ -0.44
Trim9-205ENSMUST00000221041 Eef2kO08796 724 aa12.29□□□□□ -0.44
Trim9-205ENSMUST00000221041 Adam1bQ8R534 806 aa12.29□□□□□ -0.44
Trim9-205ENSMUST00000221041 Zbtb43Q9DAI4 467 aa12.29□□□□□ -0.44
Trim9-205ENSMUST00000221041 Tpm3-rs7D3Z2H9 248 aa12.28□□□□□ -0.44
Trim9-205ENSMUST00000221041 Myl3P09542 204 aa12.28□□□□□ -0.44
Trim9-205ENSMUST00000221041 Acap3Q6NXL5 833 aa12.28□□□□□ -0.44
Trim9-205ENSMUST00000221041 Zeb2Q9R0G7 1215 aa12.28□□□□□ -0.44
Trim9-205ENSMUST00000221041 NcapgE9PWG6 1004 aa12.28□□□□□ -0.44
Trim9-205ENSMUST00000221041 Gabpb2P81069 414 aa12.28□□□□□ -0.44
Trim9-205ENSMUST00000221041 Kiaa0753Q6A000 959 aa12.28□□□□□ -0.44
Trim9-205ENSMUST00000221041 Dusp9Q7TNL7 452 aa12.28□□□□□ -0.44
Trim9-205ENSMUST00000221041 Syt10Q9R0N4 523 aa12.28□□□□□ -0.44
Trim9-205ENSMUST00000221041 Drc7Q6V3W6 876 aa12.28□□□□□ -0.44
Trim9-205ENSMUST00000221041 Fam160b2Q80YR2 744 aa12.28□□□□□ -0.44
Trim9-205ENSMUST00000221041 Ubxn10Q8BG34 277 aa12.28□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 13.4 ms