RNA–Protein interactions for RNA: ENSMUST00000210061.1

Clcn4-203, Transcript of H(+)/Cl(-) exchange transporter 4, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Clcn4, Length 2,445 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4-203ENSMUST00000210061 Gpatch3Q8BIY1 525 aa15.9■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Dis3l2Q8CI75 870 aaKnown RBP15.9■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Dnajc14Q921R4 703 aa15.9■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Erc1Q99MI1 1120 aa15.9■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Dhx40Q6PE54 779 aaKnown RBP15.9■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Ripor2Q80U16 1078 aa15.9■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Ints4Q8CIM8 964 aa15.9■□□□□ 0.14
Clcn4-203ENSMUST00000210061 BrapQ99MP8 591 aa15.9■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Dusp10Q9ESS0 483 aa15.9■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Col22a1E9Q7P1 1613 aa15.89■□□□□ 0.14
Clcn4-203ENSMUST00000210061 Sipa1l2Q80TE4 1722 aa15.89■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Trim59Q922Y2 403 aa15.89■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Col4a3bpQ9EQG9 624 aa15.89■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Atp1a3Q6PIC6 1013 aa15.89■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Frmd3Q8BHD4 595 aa15.89■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Creld2Q9CYA0 350 aa15.89■□□□□ 0.13
Clcn4-203ENSMUST00000210061 TefQ9JLC6 301 aa15.89■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Wdr17E9Q271 1322 aa15.89■□□□□ 0.13
Clcn4-203ENSMUST00000210061 MypnQ5DTJ9 1315 aa15.89■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Col15a1O35206 1367 aa15.88■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Atp2b1G5E829 1220 aa15.88■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Mtx1P47802 317 aa15.88■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Cct2P80314 535 aaKnown RBP15.88■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Cnnm1Q0GA42 951 aa15.88■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Gm21985Q6P6P5 1106 aa15.88■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Prkab2Q6PAM0 271 aa15.88■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Nxf7Q80SZ6 620 aaKnown RBP15.88■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Q8BZJ8 459 aa15.88■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Chmp7Q8R1T1 451 aa15.88■□□□□ 0.13
Clcn4-203ENSMUST00000210061 CenpqQ9CPQ5 267 aa15.88■□□□□ 0.13
Clcn4-203ENSMUST00000210061 TnrQ8BYI9 1358 aa15.88■□□□□ 0.13
Clcn4-203ENSMUST00000210061 NmiO35309 314 aa15.88■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Frat1P70339 274 aa15.88■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Pus3Q9JI38 481 aa15.88■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Pde3aQ9Z0X4 1141 aa15.88■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Rgs9O54828 675 aa15.87■□□□□ 0.13
Clcn4-203ENSMUST00000210061 AppP12023 770 aa15.87■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Exosc10P56960 887 aaKnown RBP15.87■□□□□ 0.13
Clcn4-203ENSMUST00000210061 NpeppsQ11011 920 aa15.87■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Golph3lQ8R088 285 aaKnown RBP15.87■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Ddx41Q91VN6 622 aaKnown RBP15.87■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Ppfia3P60469 1194 aa15.87■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Rufy2Q8R4C2 606 aa15.87■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Hnrnpul1Q8VDM6 859 aaKnown RBP15.87■□□□□ 0.13
Clcn4-203ENSMUST00000210061 LratQ9JI60 231 aa15.87■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Slit1Q80TR4 1531 aa15.86■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Surf1P09925 306 aa15.86■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Anks1aP59672 1150 aa15.86■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Nlrp1aQ2LKU9 1182 aa15.86■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Gnat3Q3V3I2 354 aa15.86■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Fsd1Q7TPM6 496 aa15.86■□□□□ 0.13
Clcn4-203ENSMUST00000210061 ThemisQ8BGW0 636 aa15.86■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Pms1Q8K119 917 aa15.86■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Ccer1Q9CQL2 403 aa15.86■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Vps33aQ9D2N9 598 aa15.86■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Phkg2Q9DB30 406 aa15.86■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Soga3Q6NZL0 945 aa15.86■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Ppp4r3aQ6P2K6 820 aa15.86■□□□□ 0.13
Clcn4-203ENSMUST00000210061 TkfcQ8VC30 578 aa15.86■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Ccdc129Q14B48 1034 aa15.85■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Ccdc82Q6PG04 518 aa15.85■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Golim4Q8BXA1 655 aa15.85■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Slc39a6Q8C145 765 aa15.85■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Pes1Q9EQ61 584 aaKnown RBP15.85■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Zkscan5Q9Z1D8 819 aa15.85■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Cyp2d10P24456 504 aa15.85■□□□□ 0.13
Clcn4-203ENSMUST00000210061 XpcP51612 930 aa15.85■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Tpm1P58771 284 aa15.85■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Tcof1O08784 1320 aaKnown RBP15.85■□□□□ 0.13
Clcn4-203ENSMUST00000210061 GphnQ8BUV3 769 aaKnown RBP15.84■□□□□ 0.13
Clcn4-203ENSMUST00000210061 4930548H24RikQ9D496 437 aa15.84■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Naa16Q9DBB4 864 aa15.84■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Tjp1P39447 1745 aaKnown RBP15.84■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Siglec1Q62230 1695 aa15.84■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Kcnd1Q03719 651 aa15.84■□□□□ 0.13
Clcn4-203ENSMUST00000210061 NfkbibQ60778 359 aa15.84■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Ddx58Q6Q899 926 aa15.84■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Lmbrd2Q8C561 694 aa15.84■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Atad2Q8CDM1 1040 aa15.84■□□□□ 0.13
Clcn4-203ENSMUST00000210061 PigbQ9JJQ0 542 aa15.84■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Col14a1Q80X19 1797 aa15.84■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Casz1Q9CWL2 1761 aa15.84■□□□□ 0.13
Clcn4-203ENSMUST00000210061 Hspd1P63038 573 aaKnown RBP15.83■□□□□ 0.12
Clcn4-203ENSMUST00000210061 LyarQ08288 388 aaKnown RBP15.83■□□□□ 0.12
Clcn4-203ENSMUST00000210061 Fkbp5Q64378 456 aa15.83■□□□□ 0.12
Clcn4-203ENSMUST00000210061 Tmem87aQ8BXN9 555 aa15.83■□□□□ 0.12
Clcn4-203ENSMUST00000210061 Rimbp3Q3V0F0 1606 aa15.83■□□□□ 0.12
Clcn4-203ENSMUST00000210061 Prl3d3A0A0M6L0J6 224 aa15.83■□□□□ 0.12
Clcn4-203ENSMUST00000210061 Sult6b1P0CC03 303 aa15.83■□□□□ 0.12
Clcn4-203ENSMUST00000210061 Ncaph2Q8BSP2 607 aa15.83■□□□□ 0.12
Clcn4-203ENSMUST00000210061 Telo2Q9DC40 840 aaKnown RBP15.83■□□□□ 0.12
Clcn4-203ENSMUST00000210061 Sos2Q02384 1333 aa15.83■□□□□ 0.12
Clcn4-203ENSMUST00000210061 Topaz1E5FYH1 1653 aa15.82■□□□□ 0.12
Clcn4-203ENSMUST00000210061 Usp42B2RQC2 1324 aaKnown RBP15.82■□□□□ 0.12
Clcn4-203ENSMUST00000210061 Ess2O70279 479 aa15.82■□□□□ 0.12
Clcn4-203ENSMUST00000210061 Tns3Q5SSZ5 1440 aa15.82■□□□□ 0.12
Clcn4-203ENSMUST00000210061 ZyxQ62523 564 aa15.82■□□□□ 0.12
Clcn4-203ENSMUST00000210061 Dzip1Q8BMD2 852 aa15.82■□□□□ 0.12
Clcn4-203ENSMUST00000210061 Fam43aQ8BUP8 424 aa15.82■□□□□ 0.12
Clcn4-203ENSMUST00000210061 Ift57Q8BXG3 429 aa15.82■□□□□ 0.12
Retrieved 100 of 22,080 RNA–protein pairs in 58.1 ms