RNA–Protein interactions for RNA: ENSMUST00000208255.1

Pcf11-205, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

BASIC

Gene Pcf11, Length 1,720 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-205ENSMUST00000208255 Il15P48346 162 aa29.44■■■□□ 2.3
Pcf11-205ENSMUST00000208255 Zbtb45Q52KG4 520 aa29.44■■■□□ 2.3
Pcf11-205ENSMUST00000208255 Rab3gap1Q80UJ7 981 aa29.44■■■□□ 2.3
Pcf11-205ENSMUST00000208255 CpvlQ9D3S9 478 aa29.44■■■□□ 2.3
Pcf11-205ENSMUST00000208255 Usp21Q9QZL6 566 aa29.44■■■□□ 2.3
Pcf11-205ENSMUST00000208255 Pde8bE9Q4S1 865 aa29.43■■■□□ 2.3
Pcf11-205ENSMUST00000208255 Timm10P62073 90 aa29.43■■■□□ 2.3
Pcf11-205ENSMUST00000208255 Znf496Q5SXI5 585 aa29.43■■■□□ 2.3
Pcf11-205ENSMUST00000208255 Itgb4A2A863 1818 aa29.43■■■□□ 2.3
Pcf11-205ENSMUST00000208255 Dok7Q18PE0 504 aa29.42■■■□□ 2.3
Pcf11-205ENSMUST00000208255 Cyp2ab1S4R196 498 aa29.42■■■□□ 2.3
Pcf11-205ENSMUST00000208255 IntuQ059U7 942 aa29.42■■■□□ 2.3
Pcf11-205ENSMUST00000208255 Plekhf1Q3TB82 279 aa29.42■■■□□ 2.3
Pcf11-205ENSMUST00000208255 Glg1Q61543 1175 aaKnown RBP29.42■■■□□ 2.3
Pcf11-205ENSMUST00000208255 Pdzph1Q8BGR1 1238 aa29.42■■■□□ 2.3
Pcf11-205ENSMUST00000208255 Taf1dQ9D4V4 322 aa29.42■■■□□ 2.3
Pcf11-205ENSMUST00000208255 Hirip3Q8BLH7 601 aa29.41■■■□□ 2.3
Pcf11-205ENSMUST00000208255 Brf1Q8CFK2 676 aa29.41■■■□□ 2.3
Pcf11-205ENSMUST00000208255 Sh3bp5Q9Z131 463 aa29.41■■■□□ 2.3
Pcf11-205ENSMUST00000208255 Scn11aQ9R053 1765 aa29.41■■■□□ 2.3
Pcf11-205ENSMUST00000208255 Ubxn2bQ0KL01 331 aa29.4■■■□□ 2.3
Pcf11-205ENSMUST00000208255 Asap2Q7SIG6 958 aa29.4■■■□□ 2.3
Pcf11-205ENSMUST00000208255 HlfQ8BW74 295 aa29.4■■■□□ 2.3
Pcf11-205ENSMUST00000208255 Nup188Q6ZQH8 1759 aa29.4■■■□□ 2.3
Pcf11-205ENSMUST00000208255 GabrdP22933 449 aa29.4■■■□□ 2.3
Pcf11-205ENSMUST00000208255 Celf1P28659 486 aaKnown RBP29.4■■■□□ 2.3
Pcf11-205ENSMUST00000208255 Mctp2Q5RJH2 878 aa29.4■■■□□ 2.3
Pcf11-205ENSMUST00000208255 Slfn1Q9Z0I7 337 aa29.4■■■□□ 2.3
Pcf11-205ENSMUST00000208255 NfixP70257 488 aa29.39■■■□□ 2.3
Pcf11-205ENSMUST00000208255 Znf692Q3U381 531 aa29.39■■■□□ 2.3
Pcf11-205ENSMUST00000208255 Znfx1Q8R151 1909 aaKnown RBP29.38■■■□□ 2.29
Pcf11-205ENSMUST00000208255 Speer4dL7N216 212 aa29.38■■■□□ 2.29
Pcf11-205ENSMUST00000208255 Mrps5Q99N87 432 aaKnown RBP29.38■■■□□ 2.29
Pcf11-205ENSMUST00000208255 Atp2b3Q0VF55 1220 aa29.37■■■□□ 2.29
Pcf11-205ENSMUST00000208255 EspnlQ3UYR4 1005 aa29.37■■■□□ 2.29
Pcf11-205ENSMUST00000208255 Nol8Q3UHX0 1147 aaKnown RBP29.37■■■□□ 2.29
Pcf11-205ENSMUST00000208255 Pcsk7Q61139 770 aa29.37■■■□□ 2.29
Pcf11-205ENSMUST00000208255 Slc4a1P04919 929 aa29.36■■■□□ 2.29
Pcf11-205ENSMUST00000208255 Rad23bP54728 416 aa29.36■■■□□ 2.29
Pcf11-205ENSMUST00000208255 Tmem266Q8BZB3 538 aa29.36■■■□□ 2.29
Pcf11-205ENSMUST00000208255 Kcnn1Q9EQR3 537 aa29.36■■■□□ 2.29
Pcf11-205ENSMUST00000208255 Stk3Q9JI10 497 aa29.36■■■□□ 2.29
Pcf11-205ENSMUST00000208255 Zfp831A2ADM8 1628 aa29.36■■■□□ 2.29
Pcf11-205ENSMUST00000208255 Pde3bQ61409 1100 aa29.35■■■□□ 2.29
Pcf11-205ENSMUST00000208255 Rhot2Q8JZN7 620 aa29.35■■■□□ 2.29
Pcf11-205ENSMUST00000208255 Ttc5Q99LG4 440 aa29.35■■■□□ 2.29
Pcf11-205ENSMUST00000208255 Phrf1A6H619 1682 aa29.35■■■□□ 2.29
Pcf11-205ENSMUST00000208255 Bend4P86174 541 aa29.34■■■□□ 2.29
Pcf11-205ENSMUST00000208255 ZyxQ62523 564 aa29.34■■■□□ 2.29
Pcf11-205ENSMUST00000208255 Il1rapl2Q9ERS6 686 aa29.34■■■□□ 2.29
Pcf11-205ENSMUST00000208255 Olfr247E9PVJ7 320 aa29.34■■■□□ 2.29
Pcf11-205ENSMUST00000208255 Olfr819K7N727 320 aa29.34■■■□□ 2.29
Pcf11-205ENSMUST00000208255 Kiaa0753Q6A000 959 aa29.34■■■□□ 2.29
Pcf11-205ENSMUST00000208255 Kcnq5Q9JK45 933 aa29.34■■■□□ 2.29
Pcf11-205ENSMUST00000208255 EgfrQ01279 1210 aa29.33■■■□□ 2.29
Pcf11-205ENSMUST00000208255 Best3Q6H1V1 669 aa29.33■■■□□ 2.29
Pcf11-205ENSMUST00000208255 Camkk2Q8C078 588 aa29.33■■■□□ 2.29
Pcf11-205ENSMUST00000208255 TsksO54887 585 aa29.32■■■□□ 2.28
Pcf11-205ENSMUST00000208255 PrimpolQ6P1E7 537 aa29.32■■■□□ 2.28
Pcf11-205ENSMUST00000208255 Ppip5k2Q6ZQB6 1129 aa29.32■■■□□ 2.28
Pcf11-205ENSMUST00000208255 Ift57Q8BXG3 429 aa29.32■■■□□ 2.28
Pcf11-205ENSMUST00000208255 Slc14a2Q8R4T9 930 aa29.32■■■□□ 2.28
Pcf11-205ENSMUST00000208255 Rnf123Q5XPI3 1314 aa29.32■■■□□ 2.28
Pcf11-205ENSMUST00000208255 Nup98Q6PFD9 1816 aaKnown RBP29.31■■■□□ 2.28
Pcf11-205ENSMUST00000208255 Mtcl1Q3UHU5 1945 aa29.31■■■□□ 2.28
Pcf11-205ENSMUST00000208255 Vps54Q5SPW0 977 aa29.31■■■□□ 2.28
Pcf11-205ENSMUST00000208255 Cd248Q91V98 765 aa29.31■■■□□ 2.28
Pcf11-205ENSMUST00000208255 Gm4340L7N2C4 268 aa29.31■■■□□ 2.28
Pcf11-205ENSMUST00000208255 Sept1P42209 366 aa29.31■■■□□ 2.28
Pcf11-205ENSMUST00000208255 Rbbp8nlA2ABX0 614 aa29.3■■■□□ 2.28
Pcf11-205ENSMUST00000208255 Ppil4Q9CXG3 492 aaKnown RBP29.3■■■□□ 2.28
Pcf11-205ENSMUST00000208255 Ccne2Q9Z238 404 aa29.3■■■□□ 2.28
Pcf11-205ENSMUST00000208255 EvplQ9D952 2035 aa29.3■■■□□ 2.28
Pcf11-205ENSMUST00000208255 Krt25Q8VCW2 446 aa29.29■■■□□ 2.28
Pcf11-205ENSMUST00000208255 Osbpl5Q9ER64 874 aa29.29■■■□□ 2.28
Pcf11-205ENSMUST00000208255 Rabep1O35551 862 aa29.28■■■□□ 2.28
Pcf11-205ENSMUST00000208255 Hsp90b1P08113 802 aaKnown RBP29.28■■■□□ 2.28
Pcf11-205ENSMUST00000208255 ParvgQ9ERD8 331 aa29.28■■■□□ 2.28
Pcf11-205ENSMUST00000208255 GorabQ8BRM2 368 aa29.27■■■□□ 2.28
Pcf11-205ENSMUST00000208255 Casp1P29452 402 aa29.26■■■□□ 2.27
Pcf11-205ENSMUST00000208255 Ipo9Q91YE6 1041 aa29.26■■■□□ 2.27
Pcf11-205ENSMUST00000208255 Gdf11Q9Z1W4 405 aa29.26■■■□□ 2.27
Pcf11-205ENSMUST00000208255 Ppm1gQ61074 542 aa29.25■■■□□ 2.27
Pcf11-205ENSMUST00000208255 TrhQ62361 256 aa29.25■■■□□ 2.27
Pcf11-205ENSMUST00000208255 Ell2Q3UKU1 639 aa29.25■■■□□ 2.27
Pcf11-205ENSMUST00000208255 Insm1Q63ZV0 521 aa29.25■■■□□ 2.27
Pcf11-205ENSMUST00000208255 Ufl1Q8CCJ3 793 aaKnown RBP29.25■■■□□ 2.27
Pcf11-205ENSMUST00000208255 Sh3bp5lQ99LH9 392 aa29.25■■■□□ 2.27
Pcf11-205ENSMUST00000208255 Fam84aQ9D650 292 aa29.25■■■□□ 2.27
Pcf11-205ENSMUST00000208255 Sptlc3Q8BG54 563 aa29.24■■■□□ 2.27
Pcf11-205ENSMUST00000208255 Gm10093D3YYI8 482 aa29.23■■■□□ 2.27
Pcf11-205ENSMUST00000208255 Hdac1O09106 482 aaKnown RBP29.23■■■□□ 2.27
Pcf11-205ENSMUST00000208255 Nedd4P46935 887 aaKnown RBP29.23■■■□□ 2.27
Pcf11-205ENSMUST00000208255 Riok1Q922Q2 567 aa29.23■■■□□ 2.27
Pcf11-205ENSMUST00000208255 Rdm1Q9CQK3 281 aa29.23■■■□□ 2.27
Pcf11-205ENSMUST00000208255 Mrpl12Q9DB15 201 aaKnown RBP29.23■■■□□ 2.27
Pcf11-205ENSMUST00000208255 Ppfia1B2RXQ2 1266 aa29.23■■■□□ 2.27
Pcf11-205ENSMUST00000208255 Cyp2c69E9PXC3 491 aa29.23■■■□□ 2.27
Pcf11-205ENSMUST00000208255 Atp6v1aP50516 617 aaKnown RBP29.23■■■□□ 2.27
Pcf11-205ENSMUST00000208255 Cyp2c40P56657 491 aa29.23■■■□□ 2.27
Retrieved 100 of 22,080 RNA–protein pairs in 9 ms