RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 Taf7lQ9D3R9 471 aa10.55□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Fbf1A2A870 1173 aa10.54□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Atp2b3Q0VF55 1220 aa10.54□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Ttll12Q3UDE2 639 aa10.54□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Tarbp1E9Q368 1579 aa10.54□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Tpx2A2APB8 745 aaKnown RBP10.54□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Oas2E9Q9A9 742 aa10.54□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Znf518aB2RRF6 1478 aaKnown RBP10.54□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Tacc1Q6Y685 774 aa10.54□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Sh3d21Q7TSG5 549 aa10.54□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Edc3Q8K2D3 508 aaKnown RBP10.54□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Usp54Q8BL06 1588 aaKnown RBP10.54□□□□□ -0.72
Scn8a-213ENSMUST00000201549 U2af2P26369 475 aaKnown RBP10.54□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Smc1bQ920F6 1248 aa10.54□□□□□ -0.72
Scn8a-213ENSMUST00000201549 NgdnQ9DB96 315 aaKnown RBP10.54□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Vps37dQ810I0 261 aa10.54□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Zswim4Q8C7B8 1101 aa10.54□□□□□ -0.72
Scn8a-213ENSMUST00000201549 EspnlQ3UYR4 1005 aa10.53□□□□□ -0.72
Scn8a-213ENSMUST00000201549 SltmQ8CH25 1031 aaKnown RBP10.53□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Cnot6lQ8VEG6 555 aa10.53□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Bicc1Q99MQ1 977 aaKnown RBP10.53□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Mnat1P51949 309 aa10.53□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Vps54Q5SPW0 977 aa10.53□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Clcn1Q64347 994 aa10.53□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Ccdc82Q6PG04 518 aa10.53□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Cdca8Q8BHX3 289 aa10.53□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Lmbrd2Q8C561 694 aa10.53□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Slc4a8Q8JZR6 1089 aa10.53□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Plcd1Q8R3B1 756 aa10.53□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Ets1P27577 440 aa10.53□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Klhl30Q8C3F7 581 aa10.53□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Ano2Q8CFW1 1002 aa10.53□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Zmym3Q9JLM4 1370 aa10.53□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Nf2P46662 596 aa10.53□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Anp32cQ64G17 123 aa10.53□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Lmod1Q8BVA4 595 aa10.53□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Hs6st3Q9QYK4 470 aa10.53□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Taf7Q9R1C0 341 aa10.53□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Uhrf1bp1lA2RSJ4 1457 aa10.52□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Plxnc1Q9QZC2 1574 aa10.52□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Krt25Q8VCW2 446 aa10.52□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Klhl10Q9D5V2 608 aa10.52□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Tm6sf1P58749 370 aa10.52□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Frat1P70339 274 aa10.52□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Ccdc93Q7TQK5 629 aa10.52□□□□□ -0.73
Scn8a-213ENSMUST00000201549 4921504E06RikQ8CET2 560 aa10.52□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Gm44503E9PYU5 387 aa10.52□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Cyp7a1Q64505 503 aa10.52□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Dzip1Q8BMD2 852 aa10.52□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Ccdc73Q8CDM4 1066 aa10.52□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Efcab2Q9CQ46 164 aa10.52□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Ccdc83Q9D4V3 305 aa10.52□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Gtf3c6Q9D8P7 227 aa10.52□□□□□ -0.73
Scn8a-213ENSMUST00000201549 LratQ9JI60 231 aa10.52□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Nup160Q9Z0W3 1402 aaKnown RBP10.52□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Smarcad1Q04692 1021 aa10.52□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Wdr93Q402B2 695 aa10.52□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Zkscan4Q5SZT6 480 aa10.52□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Ankle2Q6P1H6 964 aa10.52□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Zscan25B2RX31 543 aa10.51□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Ptgs1P22437 602 aa10.51□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Rai14Q9EP71 979 aaKnown RBP10.51□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Jade2Q6ZQF7 829 aa10.51□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Ncapg2Q6DFV1 1138 aa10.51□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Rps6kb1Q8BSK8 525 aa10.51□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Cep152A2AUM9 1736 aaKnown RBP10.51□□□□□ -0.73
Scn8a-213ENSMUST00000201549 GmnnO88513 206 aa10.51□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Rad23bP54728 416 aa10.51□□□□□ -0.73
Scn8a-213ENSMUST00000201549 ZgpatQ8VDM1 511 aa10.51□□□□□ -0.73
Scn8a-213ENSMUST00000201549 SnrkQ8VDU5 748 aa10.51□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Zbtb43Q9DAI4 467 aa10.51□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Tmod2Q9JKK7 351 aa10.51□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Zfp251Q6PCX8 632 aa10.51□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Zfp397Q7TNK4 527 aa10.51□□□□□ -0.73
Scn8a-213ENSMUST00000201549 SympkQ80X82 1284 aa10.51□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Morc4Q8BMD7 928 aa10.51□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Cc2d1bQ8BRN9 848 aa10.51□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Fam76aQ922G2 307 aa10.51□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Rnf34Q99KR6 376 aa10.51□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Luc7lQ9CYI4 371 aaKnown RBP10.51□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Dnajc10Q9DC23 793 aa10.51□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Ktn1Q61595 1327 aaKnown RBP10.51□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Sptlc2P97363 560 aaKnown RBP10.51□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Cacna2d4Q5RJF7 1116 aa10.51□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Terf2ipQ91VL8 393 aa10.51□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Mbd5B1AYB6 1498 aa10.5□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Fam177a1Q8BR63 207 aa10.5□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Knop1Q9Z2Q2 478 aaKnown RBP10.5□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Nckap5lQ6GQX2 1323 aa10.5□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Pet2A2AHY8 747 aa10.5□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Cnga2Q62398 664 aa10.5□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Ift122Q6NWV3 1182 aa10.5□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Acnat2Q8BGG9 420 aa10.5□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Lrrc2Q8VDB8 371 aa10.5□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Pik3ap1Q9EQ32 811 aa10.5□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Dync1i1O88485 628 aa10.5□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Sun3Q5SS91 320 aa10.5□□□□□ -0.73
Scn8a-213ENSMUST00000201549 ClasrpQ8CFC7 668 aa10.5□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Brms1Q99N20 246 aa10.5□□□□□ -0.73
Scn8a-213ENSMUST00000201549 Acot9Q9R0X4 439 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms