RNA–Protein interactions for RNA: ENSMUST00000108910.9

Scn8a-205, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Scn8a, Length 11,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-205ENSMUST00000108910 Ak2Q9WTP6 239 aa7.64□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Ythdc2B2RR83 1445 aaKnown RBP7.64□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Krt7Q9DCV7 457 aa7.64□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Specc1Q5SXY1 1067 aa7.64□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Lrsam1Q80ZI6 727 aa7.64□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Liat1Q810M6 228 aa7.64□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Sycp2lA0A0M3U1B0 842 aa7.64□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Myl3P09542 204 aa7.64□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Capza3P70190 299 aa7.64□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Rbm26Q6NZN0 1012 aaKnown RBP7.64□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Myl6bQ8CI43 207 aa7.64□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Rtn1Q8K0T0 780 aa7.64□□□□□ -1.19
Scn8a-205ENSMUST00000108910 BC005561E9Q5E2 1589 aa7.64□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Gpatch8A2A6A1 1505 aa7.64□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Clul1Q3ZRW6 464 aa7.64□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Ano6Q6P9J9 911 aa7.64□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Fam213aQ9CYH2 218 aa7.64□□□□□ -1.19
Scn8a-205ENSMUST00000108910 AdnpQ9Z103 1108 aaKnown RBP7.64□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Gm28919A0A087WP35 240 aa7.64□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Ccdc170D3YXL0 722 aa7.64□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Mcmdc2E9Q956 681 aa7.64□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Eif4a2P10630 407 aa7.64□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Fermt1P59113 677 aa7.64□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Tti2Q8BGV4 512 aa7.64□□□□□ -1.19
Scn8a-205ENSMUST00000108910 DonsonQ9QXP4 560 aa7.64□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Gbp1Q01514 589 aa7.64□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Ppfibp2O35711 882 aa7.64□□□□□ -1.19
Scn8a-205ENSMUST00000108910 GnaqP21279 359 aa7.64□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Spag17Q5S003 2320 aa7.63□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Esyt1Q3U7R1 1092 aaKnown RBP7.63□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Egfem1Q8C088 590 aa7.63□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Nek11Q8C0Q4 628 aa7.63□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Uba5Q8VE47 403 aa7.63□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Chmp6P0C0A3 200 aa7.63□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Igbp1Q61249 340 aa7.63□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Aldh8a1Q8BH00 487 aa7.63□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Gdpd2Q9ESM6 539 aa7.63□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Calm1P0DP26 149 aaKnown RBP7.63□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Calm2P0DP27 149 aaKnown RBP7.63□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Calm3P0DP28 149 aaKnown RBP7.63□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Tmem143Q8VD26 458 aa7.63□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Ccdc148Q6P5U8 527 aa7.63□□□□□ -1.19
Scn8a-205ENSMUST00000108910 RestQ8VIG1 1082 aa7.63□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Syce1Q9D495 329 aa7.63□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Mdm2P23804 489 aa7.63□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Top1Q04750 767 aaKnown RBP7.63□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Usp37Q8C0R0 979 aa7.63□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Ddx23D3Z0M9 819 aaKnown RBP7.63□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Nucb1Q02819 459 aaKnown RBP7.63□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Ankrd13dQ6PD24 605 aa7.63□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Smarcc2Q6PDG5 1213 aa7.63□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Terf2ipQ91VL8 393 aa7.63□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Atf7ipQ7TT18 1306 aa7.63□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Cep19Q9CQA8 163 aa7.63□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Uso1Q9Z1Z0 959 aaKnown RBP7.63□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Ube3aO08759 870 aa7.63□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Pdzrn3Q69ZS0 1063 aa7.63□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Ehbp1Q69ZW3 1231 aa7.63□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Rdm1Q9CQK3 281 aa7.63□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Epb41l2O70318 988 aaKnown RBP7.63□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Tcerg1lQ3B807 590 aa7.63□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Snx25Q3ZT31 840 aa7.63□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Cavin2Q63918 418 aaKnown RBP7.63□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Xrcc4Q924T3 326 aa7.63□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Ccdc94Q9D6J3 314 aa7.63□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Ppip5k1A2ARP1 1436 aa7.62□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Glg1Q61543 1175 aaKnown RBP7.62□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Ifit2Q64112 472 aa7.62□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Bicd1Q8BR07 835 aa7.62□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Hs6st3Q9QYK4 470 aa7.62□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Gon4lQ9DB00 2260 aa7.62□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Casp1P29452 402 aa7.62□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Nlrp2Q4PLS0 1046 aaKnown RBP7.62□□□□□ -1.19
Scn8a-205ENSMUST00000108910 P4ha1Q60715 534 aa7.62□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Tekt3Q6X6Z7 490 aa7.62□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Znf428Q8C1M2 176 aa7.62□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Mxra7Q9CZH7 178 aa7.62□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Gm10378F6XQQ1 160 aa7.62□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Ier5O89113 308 aa7.62□□□□□ -1.19
Scn8a-205ENSMUST00000108910 MycbpapQ5SUV2 932 aa7.62□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Sec62Q8BU14 398 aaKnown RBP7.62□□□□□ -1.19
Scn8a-205ENSMUST00000108910 BrapQ99MP8 591 aa7.62□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Tubb4aQ9D6F9 444 aa7.62□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Sept14Q9DA97 430 aa7.62□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Capn12Q9ER56 720 aa7.62□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Ufl1Q8CCJ3 793 aaKnown RBP7.62□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Bicc1Q99MQ1 977 aaKnown RBP7.62□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Dydc2Q9D3X8 139 aa7.62□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Ppp1r9aH3BJD6 1292 aa7.62□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Gadd45bP22339 160 aa7.62□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Eif3j1Q3UGC7 261 aaKnown RBP7.62□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Eif3j2Q66JS6 263 aa7.62□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Usp11Q99K46 921 aa7.62□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Rufy3Q9D394 469 aa7.62□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Smarcad1Q04692 1021 aa7.62□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Caprin2Q05A80 1031 aaKnown RBP7.62□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Gnat2P50149 354 aa7.62□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Gbp8Q2V6D6 525 aa7.62□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Ccdc105Q9D4K7 499 aa7.62□□□□□ -1.19
Scn8a-205ENSMUST00000108910 Ncoa3O09000 1398 aa7.62□□□□□ -1.19
Retrieved 100 of 22,080 RNA–protein pairs in 15.3 ms