RNA–Protein interactions for RNA: ENSMUST00000108908.5

Scn8a-203, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 7,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-203ENSMUST00000108908 Ccdc112A0AUP1 442 aa12.64□□□□□ -0.39
Scn8a-203ENSMUST00000108908 NmiO35309 314 aa12.64□□□□□ -0.39
Scn8a-203ENSMUST00000108908 ParnQ8VDG3 624 aa12.64□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Txnrd1Q9JMH6 613 aa12.64□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Nckap5lQ6GQX2 1323 aa12.64□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Ddx17Q501J6 650 aaKnown RBP12.64□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Rusc2Q80U22 1514 aa12.64□□□□□ -0.39
Scn8a-203ENSMUST00000108908 HellsQ60848 821 aa12.64□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Lmbrd2Q8C561 694 aa12.64□□□□□ -0.39
Scn8a-203ENSMUST00000108908 LratQ9JI60 231 aa12.64□□□□□ -0.39
Scn8a-203ENSMUST00000108908 CrklP47941 303 aa12.64□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Hs6st3Q9QYK4 470 aa12.64□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Catsper2A2ARP9 588 aa12.64□□□□□ -0.39
Scn8a-203ENSMUST00000108908 MarcksP26645 309 aaKnown RBP12.64□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Map2k1P31938 393 aa12.64□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Cers3Q1A3B0 383 aa12.64□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Calml4Q91WQ9 153 aa12.64□□□□□ -0.39
Scn8a-203ENSMUST00000108908 PzpQ61838 1495 aa12.64□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Akr1c19G3X9Y6 323 aa12.64□□□□□ -0.39
Scn8a-203ENSMUST00000108908 CebpzP53569 1052 aaKnown RBP12.64□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Ctnna2Q61301 953 aa12.64□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Syt10Q9R0N4 523 aa12.64□□□□□ -0.39
Scn8a-203ENSMUST00000108908 NpatQ8BMA5 1420 aa12.64□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Magi3Q9EQJ9 1476 aa12.63□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Arhgef18Q6P9R4 1021 aa12.63□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Hdac9Q99N13 588 aa12.63□□□□□ -0.39
Scn8a-203ENSMUST00000108908 PtprgQ05909 1442 aa12.63□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Ttll12Q3UDE2 639 aa12.63□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Haus2Q9CQS9 234 aa12.63□□□□□ -0.39
Scn8a-203ENSMUST00000108908 AdnpQ9Z103 1108 aaKnown RBP12.63□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Cpsf1Q9EPU4 1441 aaKnown RBP12.63□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Snx13Q6PHS6 957 aa12.63□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Tekt3Q6X6Z7 490 aa12.63□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Krt79Q8VED5 531 aa12.63□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Cavin2Q63918 418 aaKnown RBP12.63□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Lrrc2Q8VDB8 371 aa12.63□□□□□ -0.39
Scn8a-203ENSMUST00000108908 AU022751B1B0V2 589 aa12.62□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Ano10Q8BH79 659 aa12.62□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Cdca8Q8BHX3 289 aa12.62□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Snrpa1P57784 255 aaKnown RBP12.62□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Ift88Q61371 824 aa12.62□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Pdzrn3Q69ZS0 1063 aa12.62□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Ano1Q8BHY3 960 aa12.62□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Terf2ipQ91VL8 393 aa12.62□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Erlin1Q91X78 346 aa12.62□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Gdpd2Q9ESM6 539 aa12.62□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Prpf40aQ9R1C7 953 aaKnown RBP12.62□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Fam135bQ9DAI6 1403 aa12.62□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Plxnc1Q9QZC2 1574 aa12.62□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Zfp42P22227 288 aa12.62□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Acnat2Q8BGG9 420 aa12.62□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Zkscan8Q8BSL0 588 aa12.62□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Klhl30Q8C3F7 581 aa12.62□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Rbm17Q8JZX4 405 aaKnown RBP12.62□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Gm18336A0A140LIU8 765 aa12.62□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Nucb1Q02819 459 aaKnown RBP12.62□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Ccdc12Q8R344 166 aaKnown RBP12.62□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Exoc1Q8R3S6 894 aa12.62□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Mlh1Q9JK91 760 aa12.62□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Atp8b3Q6UQ17 1335 aa12.62□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Gnat2P50149 354 aa12.62□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Timm10P62073 90 aa12.62□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Pprc1Q6NZN1 1644 aa12.62□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Prr29B1ARI9 187 aa12.61□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Tti2Q8BGV4 512 aa12.61□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Aldh1l2Q8K009 923 aa12.61□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Esco1Q69Z69 843 aa12.61□□□□□ -0.39
Scn8a-203ENSMUST00000108908 CpvlQ9D3S9 478 aa12.61□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Cops6O88545 324 aa12.61□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Psmd1Q3TXS7 953 aa12.61□□□□□ -0.39
Scn8a-203ENSMUST00000108908 MycbpapQ5SUV2 932 aa12.61□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Ccdc93Q7TQK5 629 aa12.61□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Gng11P61953 73 aa12.61□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Hdhd2Q3UGR5 259 aa12.61□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Slain2Q8CI08 581 aa12.61□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Efcab6Q6P1E8 1516 aa12.61□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Paxbp1P58501 919 aa12.61□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Ano6Q6P9J9 911 aa12.61□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Smarcc2Q6PDG5 1213 aa12.61□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Cadps2Q8BYR5 1297 aa12.61□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Nek11Q8C0Q4 628 aa12.61□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Ccdc73Q8CDM4 1066 aa12.61□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Uchl5Q9WUP7 329 aa12.61□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Itga6Q61739 1091 aa12.6□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Clip2Q9Z0H8 1047 aa12.6□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Gm10093D3YYI8 482 aa12.6□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Hdac1O09106 482 aaKnown RBP12.6□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Asic1Q6NXK8 526 aa12.6□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Ccdc82Q6PG04 518 aa12.6□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Fam208aQ69ZR9 1610 aaKnown RBP12.6□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Syt1P46096 421 aa12.6□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Sptlc2P97363 560 aaKnown RBP12.6□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Rufy3Q9D394 469 aa12.6□□□□□ -0.39
Scn8a-203ENSMUST00000108908 TnksQ6PFX9 1320 aa12.6□□□□□ -0.39
Scn8a-203ENSMUST00000108908 GnaqP21279 359 aa12.6□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Lmtk2Q3TYD6 1471 aa12.6□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Snap23O09044 210 aa12.6□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Ccdc122Q8BVN0 290 aa12.6□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Vps18Q8R307 973 aa12.6□□□□□ -0.39
Scn8a-203ENSMUST00000108908 Ets1P27577 440 aa12.6□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 60.4 ms