RNA–Protein interactions for RNA: ENSMUST00000108661.7

Chd3-202, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Chd3, Length 7,261 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-202ENSMUST00000108661 L1td1Q587J6 782 aaKnown RBP13.03□□□□□ -0.32
Chd3-202ENSMUST00000108661 Wwc1Q5SXA9 1104 aa13.03□□□□□ -0.32
Chd3-202ENSMUST00000108661 Rnf187Q8BFX1 236 aa13.03□□□□□ -0.32
Chd3-202ENSMUST00000108661 Nat10Q8K224 1024 aaKnown RBP13.03□□□□□ -0.32
Chd3-202ENSMUST00000108661 Efcab6Q6P1E8 1516 aa13.03□□□□□ -0.32
Chd3-202ENSMUST00000108661 Wdr17E9Q271 1322 aa13.03□□□□□ -0.32
Chd3-202ENSMUST00000108661 Rnf34Q99KR6 376 aa13.03□□□□□ -0.32
Chd3-202ENSMUST00000108661 MeiocA2AG06 965 aa13.03□□□□□ -0.32
Chd3-202ENSMUST00000108661 Nlrp2Q4PLS0 1046 aaKnown RBP13.03□□□□□ -0.32
Chd3-202ENSMUST00000108661 Tspyl2Q7TQI8 677 aa13.03□□□□□ -0.32
Chd3-202ENSMUST00000108661 Rab3gap1Q80UJ7 981 aa13.03□□□□□ -0.32
Chd3-202ENSMUST00000108661 Gm15262A0A140LIQ5 728 aa13.03□□□□□ -0.32
Chd3-202ENSMUST00000108661 Sdc2P43407 202 aa13.03□□□□□ -0.32
Chd3-202ENSMUST00000108661 Jakmip3Q5DTN8 844 aa13.03□□□□□ -0.32
Chd3-202ENSMUST00000108661 Kiaa0319Q5SZV5 1081 aa13.03□□□□□ -0.32
Chd3-202ENSMUST00000108661 Med4Q9CQA5 270 aa13.03□□□□□ -0.32
Chd3-202ENSMUST00000108661 Spocd1B1ASB6 936 aa13.03□□□□□ -0.32
Chd3-202ENSMUST00000108661 Ssrp1Q08943 708 aaKnown RBP13.02□□□□□ -0.32
Chd3-202ENSMUST00000108661 Zkscan8Q8BSL0 588 aa13.02□□□□□ -0.32
Chd3-202ENSMUST00000108661 Gnl2Q99LH1 728 aaKnown RBP13.02□□□□□ -0.32
Chd3-202ENSMUST00000108661 Hmg20bQ9Z104 317 aa13.02□□□□□ -0.32
Chd3-202ENSMUST00000108661 Cep120Q7TSG1 988 aa13.02□□□□□ -0.32
Chd3-202ENSMUST00000108661 Nop14Q8R3N1 860 aaKnown RBP13.02□□□□□ -0.32
Chd3-202ENSMUST00000108661 Trim55G3X8Y1 545 aa13.02□□□□□ -0.33
Chd3-202ENSMUST00000108661 Cdca8Q8BHX3 289 aa13.02□□□□□ -0.33
Chd3-202ENSMUST00000108661 Atf7Q8R0S1 413 aa13.02□□□□□ -0.33
Chd3-202ENSMUST00000108661 Gle1Q8R322 699 aa13.02□□□□□ -0.33
Chd3-202ENSMUST00000108661 Haus2Q9CQS9 234 aa13.02□□□□□ -0.33
Chd3-202ENSMUST00000108661 Map3k19E9Q3S4 1311 aa13.02□□□□□ -0.33
Chd3-202ENSMUST00000108661 Ktn1Q61595 1327 aaKnown RBP13.02□□□□□ -0.33
Chd3-202ENSMUST00000108661 Pde4aO89084 844 aa13.02□□□□□ -0.33
Chd3-202ENSMUST00000108661 Idi1P58044 227 aa13.02□□□□□ -0.33
Chd3-202ENSMUST00000108661 SlmapQ3URD3 845 aa13.02□□□□□ -0.33
Chd3-202ENSMUST00000108661 Abcc6Q9R1S7 1498 aa13.02□□□□□ -0.33
Chd3-202ENSMUST00000108661 Mapkapk5O54992 473 aa13.02□□□□□ -0.33
Chd3-202ENSMUST00000108661 Pafah1b1P63005 410 aaKnown RBP13.02□□□□□ -0.33
Chd3-202ENSMUST00000108661 Tdo2P48776 406 aa13.01□□□□□ -0.33
Chd3-202ENSMUST00000108661 Cnga2Q62398 664 aa13.01□□□□□ -0.33
Chd3-202ENSMUST00000108661 Nlgn1Q99K10 843 aa13.01□□□□□ -0.33
Chd3-202ENSMUST00000108661 Pdzd9Q9D9M4 266 aa13.01□□□□□ -0.33
Chd3-202ENSMUST00000108661 Pa2g4P50580 394 aaKnown RBP13.01□□□□□ -0.33
Chd3-202ENSMUST00000108661 PicalmQ7M6Y3 660 aaKnown RBP13.01□□□□□ -0.33
Chd3-202ENSMUST00000108661 Vti1aO89116 217 aa13.01□□□□□ -0.33
Chd3-202ENSMUST00000108661 Larp6Q8BN59 492 aa13.01□□□□□ -0.33
Chd3-202ENSMUST00000108661 Gps2Q921N8 327 aa13.01□□□□□ -0.33
Chd3-202ENSMUST00000108661 Akap2O54931 893 aa13.01□□□□□ -0.33
Chd3-202ENSMUST00000108661 Ankrd23Q812A3 306 aa13.01□□□□□ -0.33
Chd3-202ENSMUST00000108661 Q8C6G1 249 aa13.01□□□□□ -0.33
Chd3-202ENSMUST00000108661 Tbc1d2B1AVH7 922 aa13.01□□□□□ -0.33
Chd3-202ENSMUST00000108661 Eddm13E9Q7F5 164 aa13.01□□□□□ -0.33
Chd3-202ENSMUST00000108661 Cdkn1cP49919 348 aa13.01□□□□□ -0.33
Chd3-202ENSMUST00000108661 Krt23Q99PS0 422 aa13.01□□□□□ -0.33
Chd3-202ENSMUST00000108661 Pik3c2gO70167 1506 aa13.01□□□□□ -0.33
Chd3-202ENSMUST00000108661 Depdc5P61460 1591 aa13.01□□□□□ -0.33
Chd3-202ENSMUST00000108661 Mybbp1aQ7TPV4 1344 aaKnown RBP13□□□□□ -0.33
Chd3-202ENSMUST00000108661 Gm30191A0A0U1RNT7 187 aa13□□□□□ -0.33
Chd3-202ENSMUST00000108661 Smim5Q8BT42 78 aa13□□□□□ -0.33
Chd3-202ENSMUST00000108661 Atp10aO54827 1508 aa13□□□□□ -0.33
Chd3-202ENSMUST00000108661 XpcP51612 930 aa13□□□□□ -0.33
Chd3-202ENSMUST00000108661 Haus6Q6NV99 933 aaKnown RBP13□□□□□ -0.33
Chd3-202ENSMUST00000108661 Gm21985Q6P6P5 1106 aa13□□□□□ -0.33
Chd3-202ENSMUST00000108661 Cep170Q6A065 1588 aa13□□□□□ -0.33
Chd3-202ENSMUST00000108661 Atf5O70191 283 aa13□□□□□ -0.33
Chd3-202ENSMUST00000108661 Ncapg2Q6DFV1 1138 aa13□□□□□ -0.33
Chd3-202ENSMUST00000108661 Slc18a1Q8R090 521 aa13□□□□□ -0.33
Chd3-202ENSMUST00000108661 Rnaseh2aQ9CWY8 301 aa13□□□□□ -0.33
Chd3-202ENSMUST00000108661 Mrpl44Q9CY73 333 aaKnown RBP13□□□□□ -0.33
Chd3-202ENSMUST00000108661 Azi2Q9QYP6 405 aa13□□□□□ -0.33
Chd3-202ENSMUST00000108661 Mtmr7Q9Z2C9 660 aa13□□□□□ -0.33
Chd3-202ENSMUST00000108661 Tpx2A2APB8 745 aaKnown RBP13□□□□□ -0.33
Chd3-202ENSMUST00000108661 1700018F24RikB2RW27 314 aa13□□□□□ -0.33
Chd3-202ENSMUST00000108661 Pik3ap1Q9EQ32 811 aa13□□□□□ -0.33
Chd3-202ENSMUST00000108661 Fmn2Q9JL04 1578 aa13□□□□□ -0.33
Chd3-202ENSMUST00000108661 Vps16Q920Q4 839 aa13□□□□□ -0.33
Chd3-202ENSMUST00000108661 Gas2l2Q5SSG4 860 aa12.99□□□□□ -0.33
Chd3-202ENSMUST00000108661 Calml4Q91WQ9 153 aa12.99□□□□□ -0.33
Chd3-202ENSMUST00000108661 Pmfbp1Q9WVQ0 1022 aa12.99□□□□□ -0.33
Chd3-202ENSMUST00000108661 Dact3Q0PHV7 610 aa12.99□□□□□ -0.33
Chd3-202ENSMUST00000108661 Jarid2Q62315 1234 aa12.99□□□□□ -0.33
Chd3-202ENSMUST00000108661 Ctage5Q8R311 779 aa12.99□□□□□ -0.33
Chd3-202ENSMUST00000108661 Usp25P57080 1055 aa12.99□□□□□ -0.33
Chd3-202ENSMUST00000108661 Dnm1P39053 867 aa12.99□□□□□ -0.33
Chd3-202ENSMUST00000108661 Tfcp2l1Q3UNW5 479 aa12.99□□□□□ -0.33
Chd3-202ENSMUST00000108661 Stxbp3Q60770 592 aa12.99□□□□□ -0.33
Chd3-202ENSMUST00000108661 Tmc2Q8R4P4 888 aa12.99□□□□□ -0.33
Chd3-202ENSMUST00000108661 Kdm5cP41230 1554 aa12.99□□□□□ -0.33
Chd3-202ENSMUST00000108661 Ppfia1B2RXQ2 1266 aa12.99□□□□□ -0.33
Chd3-202ENSMUST00000108661 Olfml1Q8BSH2 233 aa12.98□□□□□ -0.33
Chd3-202ENSMUST00000108661 1700029H14RikE9PY36 240 aa12.98□□□□□ -0.33
Chd3-202ENSMUST00000108661 Nckap5lQ6GQX2 1323 aa12.98□□□□□ -0.33
Chd3-202ENSMUST00000108661 Mast1Q9R1L5 1570 aa12.98□□□□□ -0.33
Chd3-202ENSMUST00000108661 Gjc1P28229 396 aa12.98□□□□□ -0.33
Chd3-202ENSMUST00000108661 Sap30bpQ02614 308 aa12.98□□□□□ -0.33
Chd3-202ENSMUST00000108661 Gtf2iQ9ESZ8 998 aaKnown RBP12.98□□□□□ -0.33
Chd3-202ENSMUST00000108661 Atp1b3P97370 278 aa12.98□□□□□ -0.33
Chd3-202ENSMUST00000108661 Ankrd44B2RXR6 993 aa12.98□□□□□ -0.33
Chd3-202ENSMUST00000108661 Skiv2lQ6NZR5 1244 aa12.98□□□□□ -0.33
Chd3-202ENSMUST00000108661 Tmco5aQ9D9D5 303 aa12.98□□□□□ -0.33
Chd3-202ENSMUST00000108661 Ccdc102aQ3TMW1 549 aa12.97□□□□□ -0.33
Chd3-202ENSMUST00000108661 Slu7Q8BHJ9 585 aa12.97□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 22.1 ms