RNA–Protein interactions for RNA: ENSMUST00000106618.7

Ttc39a-202, Transcript of Tetratricopeptide repeat protein 39A, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ttc39a, Length 1,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39a-202ENSMUST00000106618 Rps6kb1Q8BSK8 525 aa12.84□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Ptcd1Q8C2E4 695 aaKnown RBP12.84□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Dpf1Q9QX66 387 aa12.84□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Gm13023A2A8N2 498 aa12.83□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Fbxl16A2RT62 479 aa12.83□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Pde8bE9Q4S1 865 aa12.83□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Plbd2Q3TCN2 594 aa12.83□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Rbm17Q8JZX4 405 aaKnown RBP12.83□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Kiaa0319lQ8K135 1048 aa12.83□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Tceanc2Q8R2M0 207 aa12.83□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Ppp4r3bQ922R5 820 aa12.83□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 NgdnQ9DB96 315 aaKnown RBP12.83□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 IncenpQ9WU62 880 aa12.83□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Znfx1Q8R151 1909 aaKnown RBP12.83□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Sept1P42209 366 aa12.83□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Snrpa1P57784 255 aaKnown RBP12.83□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Fam160b2Q80YR2 744 aa12.83□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Sptlc3Q8BG54 563 aa12.83□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Ift57Q8BXG3 429 aa12.83□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Lmbrd2Q8C561 694 aa12.83□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Fbxo3Q9DC63 480 aa12.83□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Zfp804bA0A0G2JGH6 1343 aa12.82□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Nyap1Q6PFX7 833 aa12.82□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 PogkQ80TC5 607 aa12.82□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Map10Q8BJS7 891 aa12.82□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Afg3l2Q8JZQ2 802 aaKnown RBP12.82□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Ttc14Q9CSP9 761 aa12.82□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Sh3bp5Q9Z131 463 aa12.82□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Npy5rO70342 466 aa12.81□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Cpa2Q504N0 417 aa12.81□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Zc3h12cQ5DTV4 884 aa12.81□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 DekQ7TNV0 380 aaKnown RBP12.81□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Lrit1Q8K099 624 aa12.81□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Plekho1Q9JIY0 408 aa12.81□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Mapk8ip1Q9WVI9 707 aa12.81□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Ppfibp2O35711 882 aa12.81□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Prl7a2O54831 253 aa12.81□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Hspd1P63038 573 aaKnown RBP12.81□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Znf692Q3U381 531 aa12.81□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Lrrc43Q3V0L5 667 aa12.81□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Nlrp9aQ66X03 949 aa12.81□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Trim56Q80VI1 734 aaKnown RBP12.81□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Ube3bQ9ES34 1070 aa12.81□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Scn11aQ9R053 1765 aa12.81□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Atp1b3P97370 278 aa12.8□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Il17raQ60943 864 aa12.8□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Taok3Q8BYC6 898 aa12.8□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Plcd4Q8K3R3 807 aa12.8□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Smc3Q9CW03 1217 aaKnown RBP12.8□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Setdb1O88974 1307 aa12.8□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Irgm2A0A140LIF8 407 aa12.8□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Eef2kO08796 724 aa12.8□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Prl3d1P18121 224 aa12.8□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Edrf1Q6GQV7 1239 aa12.8□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 CoblQ5NBX1 1337 aaKnown RBP12.79□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Stox1B2RQL2 990 aa12.79□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Gm4340L7N2C4 268 aa12.79□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 AidaQ8C4Q6 305 aa12.79□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Riok1Q922Q2 567 aa12.79□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Arhgap33Q80YF9 1305 aa12.78□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 CltaO08585 235 aa12.78□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Gimap8Q75N62 688 aa12.78□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Q8BT18 775 aa12.78□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Gripap1Q8VD04 806 aa12.78□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Emilin1Q99K41 1017 aa12.78□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Zcrb1Q9CZ96 217 aaKnown RBP12.78□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Appbp2Q9DAX9 585 aa12.78□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Myh3P13541 1940 aa12.78□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Nup98Q6PFD9 1816 aaKnown RBP12.78□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 ImpactO55091 318 aa12.78□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 VeztQ3ZK22 780 aa12.78□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Abtb2Q7TQI7 1024 aa12.78□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Slc39a11Q8BWY7 342 aa12.78□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Tmx3Q8BXZ1 456 aa12.78□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Shisa4Q8CA71 197 aa12.78□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Stx6Q9JKK1 255 aa12.78□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Col3a1P08121 1464 aa12.77□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Duox1A2AQ92 1551 aa12.77□□□□□ -0.36
Ttc39a-202ENSMUST00000106618 Speer4dL7N216 212 aa12.77□□□□□ -0.37
Ttc39a-202ENSMUST00000106618 Cyp2d9P11714 504 aa12.77□□□□□ -0.37
Ttc39a-202ENSMUST00000106618 Znf496Q5SXI5 585 aa12.77□□□□□ -0.37
Ttc39a-202ENSMUST00000106618 Bms1Q6PGF5 1284 aaKnown RBP12.77□□□□□ -0.37
Ttc39a-202ENSMUST00000106618 Srp68Q8BMA6 625 aaKnown RBP12.77□□□□□ -0.37
Ttc39a-202ENSMUST00000106618 Ccdc158Q8CDI6 1109 aa12.77□□□□□ -0.37
Ttc39a-202ENSMUST00000106618 Rassf8Q8CJ96 419 aa12.77□□□□□ -0.37
Ttc39a-202ENSMUST00000106618 Gadd45bP22339 160 aa12.76□□□□□ -0.37
Ttc39a-202ENSMUST00000106618 FanccP50652 591 aa12.76□□□□□ -0.37
Ttc39a-202ENSMUST00000106618 Exosc10P56960 887 aaKnown RBP12.76□□□□□ -0.37
Ttc39a-202ENSMUST00000106618 HmcesQ8R1M0 353 aaKnown RBP12.76□□□□□ -0.37
Ttc39a-202ENSMUST00000106618 Foxo3Q9WVH4 672 aa12.76□□□□□ -0.37
Ttc39a-202ENSMUST00000106618 Usp42B2RQC2 1324 aaKnown RBP12.76□□□□□ -0.37
Ttc39a-202ENSMUST00000106618 Sik3Q6P4S6 1311 aa12.76□□□□□ -0.37
Ttc39a-202ENSMUST00000106618 Carmil3Q3UFQ8 1375 aa12.76□□□□□ -0.37
Ttc39a-202ENSMUST00000106618 Ube4aE9Q735 1028 aa12.76□□□□□ -0.37
Ttc39a-202ENSMUST00000106618 Cyp2d34L7N463 504 aa12.76□□□□□ -0.37
Ttc39a-202ENSMUST00000106618 GabrdP22933 449 aa12.76□□□□□ -0.37
Ttc39a-202ENSMUST00000106618 Ctdnep1Q3TP92 244 aa12.76□□□□□ -0.37
Ttc39a-202ENSMUST00000106618 Gm21985Q6P6P5 1106 aa12.76□□□□□ -0.37
Ttc39a-202ENSMUST00000106618 Nme8Q715T0 586 aa12.76□□□□□ -0.37
Ttc39a-202ENSMUST00000106618 Tsr2Q8C8T8 191 aa12.76□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 16.9 ms