RNA–Protein interactions for RNA: ENSMUST00000098036.8

Cln3-203, Transcript of Battenin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Cln3, Length 1,571 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3-203ENSMUST00000098036 Asap2Q7SIG6 958 aa16.38■□□□□ 0.21
Cln3-203ENSMUST00000098036 Strip1Q8C079 837 aa16.38■□□□□ 0.21
Cln3-203ENSMUST00000098036 Ncoa5Q91W39 579 aaKnown RBP16.38■□□□□ 0.21
Cln3-203ENSMUST00000098036 Plekho1Q9JIY0 408 aa16.38■□□□□ 0.21
Cln3-203ENSMUST00000098036 Anapc15P60007 132 aa16.38■□□□□ 0.21
Cln3-203ENSMUST00000098036 CalcaP70160 136 aa16.38■□□□□ 0.21
Cln3-203ENSMUST00000098036 EgfrQ01279 1210 aa16.38■□□□□ 0.21
Cln3-203ENSMUST00000098036 Mtcl1Q3UHU5 1945 aa16.37■□□□□ 0.21
Cln3-203ENSMUST00000098036 Ddx11Q6AXC6 880 aa16.37■□□□□ 0.21
Cln3-203ENSMUST00000098036 Mrps27Q8BK72 415 aaKnown RBP16.37■□□□□ 0.21
Cln3-203ENSMUST00000098036 Krt25Q8VCW2 446 aa16.37■□□□□ 0.21
Cln3-203ENSMUST00000098036 Rdm1Q9CQK3 281 aa16.37■□□□□ 0.21
Cln3-203ENSMUST00000098036 Sh3tc1G3X9F6 1346 aa16.37■□□□□ 0.21
Cln3-203ENSMUST00000098036 Cfap44E9Q5M6 1843 aa16.36■□□□□ 0.21
Cln3-203ENSMUST00000098036 Rbbp8nlA2ABX0 614 aa16.36■□□□□ 0.21
Cln3-203ENSMUST00000098036 Timm10P62073 90 aa16.36■□□□□ 0.21
Cln3-203ENSMUST00000098036 Mre11Q61216 706 aa16.36■□□□□ 0.21
Cln3-203ENSMUST00000098036 Atxn2lQ7TQH0 1049 aaKnown RBP16.36■□□□□ 0.21
Cln3-203ENSMUST00000098036 Zkscan8Q8BSL0 588 aa16.36■□□□□ 0.21
Cln3-203ENSMUST00000098036 Il1rapl2Q9ERS6 686 aa16.36■□□□□ 0.21
Cln3-203ENSMUST00000098036 Kcnq5Q9JK45 933 aa16.36■□□□□ 0.21
Cln3-203ENSMUST00000098036 Col3a1P08121 1464 aa16.35■□□□□ 0.21
Cln3-203ENSMUST00000098036 TsksO54887 585 aa16.35■□□□□ 0.21
Cln3-203ENSMUST00000098036 EspnlQ3UYR4 1005 aa16.35■□□□□ 0.21
Cln3-203ENSMUST00000098036 EngaseQ8BX80 734 aa16.35■□□□□ 0.21
Cln3-203ENSMUST00000098036 Kdm4cQ8VCD7 1054 aa16.35■□□□□ 0.21
Cln3-203ENSMUST00000098036 SnrkQ8VDU5 748 aa16.35■□□□□ 0.21
Cln3-203ENSMUST00000098036 Rtn4Q99P72 1162 aaKnown RBP16.35■□□□□ 0.21
Cln3-203ENSMUST00000098036 Rad50P70388 1312 aa16.35■□□□□ 0.21
Cln3-203ENSMUST00000098036 Znf609Q8BZ47 1413 aa16.35■□□□□ 0.21
Cln3-203ENSMUST00000098036 Gm7347D3YYI9 267 aa16.34■□□□□ 0.21
Cln3-203ENSMUST00000098036 Speer4aF8VPX6 267 aa16.34■□□□□ 0.21
Cln3-203ENSMUST00000098036 B4galnt4Q766D5 1034 aa16.34■□□□□ 0.21
Cln3-203ENSMUST00000098036 Pdzph1Q8BGR1 1238 aa16.34■□□□□ 0.21
Cln3-203ENSMUST00000098036 FktnQ8R507 461 aa16.34■□□□□ 0.21
Cln3-203ENSMUST00000098036 Sgip1Q8VD37 806 aa16.34■□□□□ 0.21
Cln3-203ENSMUST00000098036 Sf3b3Q921M3 1217 aaKnown RBP16.34■□□□□ 0.21
Cln3-203ENSMUST00000098036 Gja10Q9WUS4 505 aa16.34■□□□□ 0.21
Cln3-203ENSMUST00000098036 Bin2D3Z6Q9 489 aa16.34■□□□□ 0.21
Cln3-203ENSMUST00000098036 Pde8bE9Q4S1 865 aa16.34■□□□□ 0.21
Cln3-203ENSMUST00000098036 Aknad1E9Q8N6 675 aa16.34■□□□□ 0.21
Cln3-203ENSMUST00000098036 Atp6v0a2P15920 856 aa16.34■□□□□ 0.21
Cln3-203ENSMUST00000098036 Nedd4P46935 887 aaKnown RBP16.34■□□□□ 0.21
Cln3-203ENSMUST00000098036 Atp2b3Q0VF55 1220 aa16.34■□□□□ 0.21
Cln3-203ENSMUST00000098036 Fhdc1Q3ULZ2 1149 aa16.34■□□□□ 0.21
Cln3-203ENSMUST00000098036 Gpr162Q3UN16 588 aa16.34■□□□□ 0.21
Cln3-203ENSMUST00000098036 Zbtb45Q52KG4 520 aa16.34■□□□□ 0.21
Cln3-203ENSMUST00000098036 Zcwpw1Q6IR42 630 aa16.34■□□□□ 0.21
Cln3-203ENSMUST00000098036 Ift57Q8BXG3 429 aa16.34■□□□□ 0.21
Cln3-203ENSMUST00000098036 Top1mtQ8R4U6 593 aa16.34■□□□□ 0.21
Cln3-203ENSMUST00000098036 Cd248Q91V98 765 aa16.34■□□□□ 0.21
Cln3-203ENSMUST00000098036 PhaxQ9JJT9 385 aaKnown RBP16.34■□□□□ 0.21
Cln3-203ENSMUST00000098036 Ube4aE9Q735 1028 aa16.33■□□□□ 0.2
Cln3-203ENSMUST00000098036 Klrk1O54709 232 aa16.33■□□□□ 0.2
Cln3-203ENSMUST00000098036 Slc4a1P04919 929 aa16.33■□□□□ 0.2
Cln3-203ENSMUST00000098036 EappQ5BU09 281 aa16.33■□□□□ 0.2
Cln3-203ENSMUST00000098036 ZyxQ62523 564 aa16.33■□□□□ 0.2
Cln3-203ENSMUST00000098036 PrimpolQ6P1E7 537 aa16.33■□□□□ 0.2
Cln3-203ENSMUST00000098036 Bmp2kQ91Z96 1138 aa16.33■□□□□ 0.2
Cln3-203ENSMUST00000098036 Riok1Q922Q2 567 aa16.33■□□□□ 0.2
Cln3-203ENSMUST00000098036 Pmfbp1Q9WVQ0 1022 aa16.33■□□□□ 0.2
Cln3-203ENSMUST00000098036 Npc1l1Q6T3U4 1333 aa16.33■□□□□ 0.2
Cln3-203ENSMUST00000098036 Dok7Q18PE0 504 aa16.32■□□□□ 0.2
Cln3-203ENSMUST00000098036 Plekhf1Q3TB82 279 aa16.32■□□□□ 0.2
Cln3-203ENSMUST00000098036 Rnf180Q3U827 592 aa16.32■□□□□ 0.2
Cln3-203ENSMUST00000098036 Vps54Q5SPW0 977 aa16.32■□□□□ 0.2
Cln3-203ENSMUST00000098036 Rbm17Q8JZX4 405 aaKnown RBP16.32■□□□□ 0.2
Cln3-203ENSMUST00000098036 Ppp4r3bQ922R5 820 aa16.32■□□□□ 0.2
Cln3-203ENSMUST00000098036 Myo3bQ1EG27 1305 aa16.32■□□□□ 0.2
Cln3-203ENSMUST00000098036 Speer4dL7N216 212 aa16.31■□□□□ 0.2
Cln3-203ENSMUST00000098036 Anxa1P10107 346 aaKnown RBP16.31■□□□□ 0.2
Cln3-203ENSMUST00000098036 Ms4a2P20490 235 aa16.31■□□□□ 0.2
Cln3-203ENSMUST00000098036 Fam160b2Q80YR2 744 aa16.31■□□□□ 0.2
Cln3-203ENSMUST00000098036 Zfp831A2ADM8 1628 aa16.31■□□□□ 0.2
Cln3-203ENSMUST00000098036 Nup188Q6ZQH8 1759 aa16.31■□□□□ 0.2
Cln3-203ENSMUST00000098036 Zkscan16A2ALW2 728 aa16.3■□□□□ 0.2
Cln3-203ENSMUST00000098036 Sept1P42209 366 aa16.3■□□□□ 0.2
Cln3-203ENSMUST00000098036 LlphQ9D945 130 aaKnown RBP16.3■□□□□ 0.2
Cln3-203ENSMUST00000098036 Pde3aQ9Z0X4 1141 aa16.3■□□□□ 0.2
Cln3-203ENSMUST00000098036 Olfr247E9PVJ7 320 aa16.3■□□□□ 0.2
Cln3-203ENSMUST00000098036 Olfr819K7N727 320 aa16.3■□□□□ 0.2
Cln3-203ENSMUST00000098036 Kiaa0753Q6A000 959 aa16.3■□□□□ 0.2
Cln3-203ENSMUST00000098036 Atp2b4Q6Q477 1205 aa16.3■□□□□ 0.2
Cln3-203ENSMUST00000098036 Rab3gap1Q80UJ7 981 aa16.3■□□□□ 0.2
Cln3-203ENSMUST00000098036 AnlnQ8K298 1121 aaKnown RBP16.3■□□□□ 0.2
Cln3-203ENSMUST00000098036 Erc1Q99MI1 1120 aa16.3■□□□□ 0.2
Cln3-203ENSMUST00000098036 TnksQ6PFX9 1320 aa16.29■□□□□ 0.2
Cln3-203ENSMUST00000098036 Cyp3a57D3YYZ0 503 aa16.29■□□□□ 0.2
Cln3-203ENSMUST00000098036 1700029H14RikE9PY36 240 aa16.29■□□□□ 0.2
Cln3-203ENSMUST00000098036 Terf2O35144 541 aa16.29■□□□□ 0.2
Cln3-203ENSMUST00000098036 Psd3Q2PFD7 1037 aa16.29■□□□□ 0.2
Cln3-203ENSMUST00000098036 Abtb2Q7TQI7 1024 aa16.29■□□□□ 0.2
Cln3-203ENSMUST00000098036 Ubxn10Q8BG34 277 aa16.29■□□□□ 0.2
Cln3-203ENSMUST00000098036 Jakmip1Q8BVL9 626 aa16.29■□□□□ 0.2
Cln3-203ENSMUST00000098036 Phrf1A6H619 1682 aa16.29■□□□□ 0.2
Cln3-203ENSMUST00000098036 Scn11aQ9R053 1765 aa16.28■□□□□ 0.2
Cln3-203ENSMUST00000098036 Setdb1O88974 1307 aa16.28■□□□□ 0.2
Cln3-203ENSMUST00000098036 Cyp2c68K7N6C2 491 aa16.28■□□□□ 0.2
Cln3-203ENSMUST00000098036 Gm4340L7N2C4 268 aa16.28■□□□□ 0.2
Cln3-203ENSMUST00000098036 Ifit2Q64112 472 aa16.28■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms