RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Rufy3Q9D394 469 aa11.22□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Actn2Q9JI91 894 aa11.22□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Robo2Q7TPD3 1470 aa11.22□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Tbc1d2B1AVH7 922 aa11.22□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Mnat1P51949 309 aa11.22□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Babam1Q3UI43 333 aa11.22□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Pof1bQ8K4L4 587 aa11.22□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Smarca5Q91ZW3 1051 aaKnown RBP11.22□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Nop2Q922K7 793 aaKnown RBP11.22□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Scnn1bQ9WU38 638 aa11.22□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Tdo2P48776 406 aa11.22□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Noc3lQ8VI84 807 aaKnown RBP11.22□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 4933428M09RikQ9D3X3 192 aa11.22□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Coro1cQ9WUM4 474 aa11.22□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Eif3aP23116 1344 aaKnown RBP11.21□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Magi1Q6RHR9 1471 aa11.21□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Pbrm1Q8BSQ9 1634 aaKnown RBP11.21□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Pdcd11Q6NS46 1862 aaKnown RBP11.21□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 RcvrnP34057 202 aa11.21□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Cct5P80316 541 aaKnown RBP11.21□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Znhit6Q3UFB2 460 aaKnown RBP11.21□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Leo1Q5XJE5 667 aa11.21□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Cd37Q61470 281 aa11.21□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Trim25Q61510 634 aaKnown RBP11.21□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Vps53Q8CCB4 832 aa11.21□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Exd1Q8CDF7 570 aa11.21□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Tshz3Q8CGV9 1081 aa11.21□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Ccdc80Q8R2G6 949 aa11.21□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Plcd1Q8R3B1 756 aa11.21□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 KynuQ9CXF0 464 aa11.21□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Abcb6Q9DC29 842 aa11.21□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Efcc1Q9JJF6 558 aa11.21□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Krt85Q9Z2T6 507 aa11.21□□□□□ -0.61
Hmgb1-201ENSMUST00000085546 Aox1O54754 1333 aa11.21□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Usp32F8VPZ3 1604 aa11.21□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Tubb4bP68372 445 aaKnown RBP11.21□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Rnf40Q3U319 1001 aa11.21□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 MmeQ61391 750 aa11.21□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Gpt2Q8BGT5 522 aa11.21□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Rbbp5Q8BX09 538 aaKnown RBP11.21□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 MyripQ8K3I4 856 aa11.21□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Nphp3Q7TNH6 1325 aa11.2□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Tdrd9Q14BI7 1383 aa11.2□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 1700113H08RikE9Q9Q5 327 aa11.2□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Akap2O54931 893 aa11.2□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Fan1Q69ZT1 1020 aa11.2□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Q8BZJ8 459 aa11.2□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Prpf6Q91YR7 941 aaKnown RBP11.2□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Ftsj3Q9DBE9 838 aaKnown RBP11.2□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Edc4Q3UJB9 1406 aaKnown RBP11.2□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 GmnnO88513 206 aa11.2□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Rps6ka3P18654 740 aaKnown RBP11.2□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 CgnP59242 1191 aa11.2□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Pfkfb2P70265 519 aa11.2□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Map3k11Q80XI6 850 aa11.2□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Vps37dQ810I0 261 aa11.2□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Vipas39Q8BGQ1 491 aa11.2□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Prune1Q8BIW1 454 aa11.2□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Zfp113Q8C689 439 aa11.2□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Vamp4O70480 141 aa11.19□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Lrrc6O88978 473 aa11.19□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Rrp1P56183 494 aaKnown RBP11.19□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 IntuQ059U7 942 aa11.19□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Tax1bp1Q3UKC1 814 aaKnown RBP11.19□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Gbp4Q61107 620 aa11.19□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Abcf1Q6P542 837 aaKnown RBP11.19□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Hpcal4Q8BGZ1 191 aa11.19□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Ankrd49Q8VE42 238 aa11.19□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Xpo4Q9ESJ0 1151 aa11.19□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Triml2E9PW10 424 aa11.19□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Tmem165P52875 323 aa11.19□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Gjb2Q00977 226 aa11.19□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Usp48Q3V0C5 1052 aa11.19□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Rmi1Q9D4G9 616 aa11.19□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Npc1l1Q6T3U4 1333 aa11.19□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Tmem109Q3UBX0 243 aa11.18□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Klhl23Q6GQU2 558 aa11.18□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Kiaa1524Q8BWY9 907 aa11.18□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 DnmbpQ6TXD4 1580 aa11.18□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Zfp275G3X904 499 aa11.18□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Slc8a1P70414 970 aa11.18□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Cdr2P97817 455 aa11.18□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Tubb5P99024 444 aaKnown RBP11.18□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 ItgadQ3V0T4 1168 aa11.18□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 MarsQ68FL6 902 aaKnown RBP11.18□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Sdad1Q80UZ2 687 aaKnown RBP11.18□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Card14Q99KF0 999 aa11.18□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Fam208aQ69ZR9 1610 aaKnown RBP11.18□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Zfy1P10925 782 aa11.17□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Wee1P47810 646 aa11.17□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 LbrQ3U9G9 626 aaKnown RBP11.17□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Utp14bQ6EJB6 756 aaKnown RBP11.17□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Lrrc1Q80VQ1 524 aa11.17□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Mphosph10Q810V0 681 aaKnown RBP11.17□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Cdca8Q8BHX3 289 aa11.17□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Trim42Q9D2H5 723 aa11.17□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Bcar3Q9QZK2 820 aa11.17□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Adcy9P51830 1353 aa11.17□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Abcc6Q9R1S7 1498 aa11.17□□□□□ -0.62
Hmgb1-201ENSMUST00000085546 Cdc42bpgQ80UW5 1551 aa11.17□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 47.8 ms