RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 Cbx1P83917 185 aaKnown RBP13.42□□□□□ -0.26
Ddx55-201ENSMUST00000071057 NpeppsQ11011 920 aa13.41□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Nlrp1aQ2LKU9 1182 aa13.41□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Exoc5Q3TPX4 708 aa13.41□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Ddx19aQ61655 478 aaKnown RBP13.41□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Ltv1Q6NSQ7 470 aaKnown RBP13.41□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Exoc8Q6PGF7 716 aa13.41□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Sgsm2Q80U12 1005 aa13.41□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Golim4Q8BXA1 655 aa13.41□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Ncoa5Q91W39 579 aaKnown RBP13.41□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Bcl2l12Q9D3J3 255 aa13.41□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Ehd4Q9EQP2 541 aa13.41□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Prl3d2F6R3P9 224 aa13.41□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Pkp1P97350 728 aaKnown RBP13.41□□□□□ -0.26
Ddx55-201ENSMUST00000071057 NfkbibQ60778 359 aa13.41□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Tmx3Q8BXZ1 456 aa13.41□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Zbtb1Q91VL9 713 aa13.41□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Gigyf1Q99MR1 1044 aaKnown RBP13.41□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Nav1Q8CH77 1875 aa13.4□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Eya2O08575 532 aa13.4□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Ca8P28651 291 aa13.4□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Syt1P46096 421 aa13.4□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Tnrc6cQ3UHC0 1690 aaKnown RBP13.4□□□□□ -0.26
Ddx55-201ENSMUST00000071057 SlkO54988 1233 aa13.4□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Anxa1P10107 346 aaKnown RBP13.4□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Nol10Q5RJG1 687 aaKnown RBP13.4□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Mrpl50Q8VDT9 159 aaKnown RBP13.4□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Lrrc59Q922Q8 307 aaKnown RBP13.4□□□□□ -0.26
Ddx55-201ENSMUST00000071057 Qtrt2B8ZXI1 415 aa13.39□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Nphp3Q7TNH6 1325 aa13.39□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Tbc1d4Q8BYJ6 1307 aa13.39□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Kcnb2A6H8H5 907 aa13.39□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Ccdc129Q14B48 1034 aa13.39□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Gnl3lQ6PGG6 577 aaKnown RBP13.39□□□□□ -0.27
Ddx55-201ENSMUST00000071057 AbraQ8BUZ1 375 aa13.39□□□□□ -0.27
Ddx55-201ENSMUST00000071057 StrbpQ91WM1 672 aaKnown RBP13.39□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Psrc1Q9D0P7 329 aa13.39□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Mrc1Q61830 1456 aa13.39□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Zfp804bA0A0G2JGH6 1343 aa13.39□□□□□ -0.27
Ddx55-201ENSMUST00000071057 AtrnQ9WU60 1428 aa13.39□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Cyp19a1P28649 503 aa13.38□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Jmjd4Q8BFT6 427 aa13.38□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Slfnl1Q8BHW9 410 aa13.38□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Paf1Q8K2T8 535 aa13.38□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Smc3Q9CW03 1217 aaKnown RBP13.38□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Pes1Q9EQ61 584 aaKnown RBP13.38□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Prr29B1ARI9 187 aa13.38□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Clca2Q8BG22 942 aa13.38□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Lmbrd2Q8C561 694 aa13.38□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Atf7Q8R0S1 413 aa13.38□□□□□ -0.27
Ddx55-201ENSMUST00000071057 PappaQ8R4K8 1624 aa13.38□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Cchcr1Q8K2I2 770 aa13.37□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Gsdma2Q32M21 443 aa13.37□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Usp48Q3V0C5 1052 aa13.37□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Rnf20Q5DTM8 973 aa13.37□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Tsr2Q8C8T8 191 aa13.37□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Gm9992B2RWK3 458 aa13.37□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Kank4Q6P9J5 1016 aa13.37□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Unc93aQ710D3 458 aa13.37□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Rassf8Q8CJ96 419 aa13.37□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Nlrp3Q8R4B8 1033 aa13.37□□□□□ -0.27
Ddx55-201ENSMUST00000071057 PhaxQ9JJT9 385 aaKnown RBP13.37□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Marf1Q8BJ34 1730 aaKnown RBP13.36□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Slc4a1P04919 929 aa13.36□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Ggt6Q6PDE7 497 aa13.36□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Rab3gap1Q80UJ7 981 aa13.36□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Sp8Q8BMJ8 486 aa13.36□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Fam102bQ8BQS4 339 aa13.36□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Nek11Q8C0Q4 628 aa13.36□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Mb21d2Q8C525 428 aa13.36□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Krt25Q8VCW2 446 aa13.36□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Lrrfip2Q91WK0 415 aa13.36□□□□□ -0.27
Ddx55-201ENSMUST00000071057 ImpactO55091 318 aa13.36□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Babam1Q3UI43 333 aa13.36□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Ankrd23Q812A3 306 aa13.36□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Cyp2d10P24456 504 aa13.35□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Rbm17Q8JZX4 405 aaKnown RBP13.35□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Ginm1Q91WR6 327 aa13.35□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Stx6Q9JKK1 255 aa13.35□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Psma5Q9Z2U1 241 aaKnown RBP13.35□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Traf1P39428 409 aa13.35□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Ercc3P49135 783 aa13.35□□□□□ -0.27
Ddx55-201ENSMUST00000071057 EappQ5BU09 281 aa13.35□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Rbm27Q5SFM8 1060 aaKnown RBP13.35□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Asap2Q7SIG6 958 aa13.35□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Miga2Q8BK03 593 aa13.35□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Cops6O88545 324 aa13.34□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Gpr182P43142 395 aa13.34□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Ftl2P49945 183 aa13.34□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Pde4dQ01063 747 aa13.34□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Ddb1Q3U1J4 1140 aaKnown RBP13.34□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Cep120Q7TSG1 988 aa13.34□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Cep126Q0VBV7 1103 aa13.34□□□□□ -0.27
Ddx55-201ENSMUST00000071057 ZyxQ62523 564 aa13.34□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Rps6kb1Q8BSK8 525 aa13.34□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Zkscan8Q8BSL0 588 aa13.34□□□□□ -0.27
Ddx55-201ENSMUST00000071057 TnksQ6PFX9 1320 aa13.33□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Mybbp1aQ7TPV4 1344 aaKnown RBP13.33□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Prl7a2O54831 253 aa13.33□□□□□ -0.27
Ddx55-201ENSMUST00000071057 Eno4Q8C042 619 aa13.33□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 22.3 ms