RNA–Protein interactions for RNA: ENSMUST00000057525.13

Trim3-201, Transcript of Tripartite motif-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim3, Length 3,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3-201ENSMUST00000057525 GabrdP22933 449 aa18.48■□□□□ 0.55
Trim3-201ENSMUST00000057525 Ell2Q3UKU1 639 aa18.48■□□□□ 0.55
Trim3-201ENSMUST00000057525 Kdm3aQ6PCM1 1323 aa18.48■□□□□ 0.55
Trim3-201ENSMUST00000057525 Speer4dL7N216 212 aa18.48■□□□□ 0.55
Trim3-201ENSMUST00000057525 Ptcd1Q8C2E4 695 aaKnown RBP18.48■□□□□ 0.55
Trim3-201ENSMUST00000057525 Q8C6G1 249 aa18.48■□□□□ 0.55
Trim3-201ENSMUST00000057525 Gja5Q01231 358 aa18.47■□□□□ 0.55
Trim3-201ENSMUST00000057525 Noc3lQ8VI84 807 aaKnown RBP18.47■□□□□ 0.55
Trim3-201ENSMUST00000057525 Map3k15A2AQW0 1331 aa18.47■□□□□ 0.55
Trim3-201ENSMUST00000057525 ZyxQ62523 564 aa18.47■□□□□ 0.55
Trim3-201ENSMUST00000057525 Dnai1Q8C0M8 701 aa18.47■□□□□ 0.55
Trim3-201ENSMUST00000057525 Lmbrd2Q8C561 694 aa18.47■□□□□ 0.55
Trim3-201ENSMUST00000057525 MecomP14404 1042 aa18.47■□□□□ 0.55
Trim3-201ENSMUST00000057525 Ppm1gQ61074 542 aa18.47■□□□□ 0.55
Trim3-201ENSMUST00000057525 Ift57Q8BXG3 429 aa18.47■□□□□ 0.55
Trim3-201ENSMUST00000057525 Sept12Q9D451 317 aa18.47■□□□□ 0.55
Trim3-201ENSMUST00000057525 Wdhd1P59328 1117 aa18.46■□□□□ 0.55
Trim3-201ENSMUST00000057525 Strip1Q8C079 837 aa18.46■□□□□ 0.55
Trim3-201ENSMUST00000057525 Rbm17Q8JZX4 405 aaKnown RBP18.46■□□□□ 0.55
Trim3-201ENSMUST00000057525 Emilin1Q99K41 1017 aa18.46■□□□□ 0.55
Trim3-201ENSMUST00000057525 Osbpl5Q9ER64 874 aa18.46■□□□□ 0.55
Trim3-201ENSMUST00000057525 Spata31d1bE9QA57 1361 aa18.46■□□□□ 0.55
Trim3-201ENSMUST00000057525 Ppfia1B2RXQ2 1266 aa18.46■□□□□ 0.55
Trim3-201ENSMUST00000057525 Rhot2Q8JZN7 620 aa18.46■□□□□ 0.55
Trim3-201ENSMUST00000057525 Tbc1d4Q8BYJ6 1307 aa18.45■□□□□ 0.54
Trim3-201ENSMUST00000057525 Slc14a2Q8R4T9 930 aa18.45■□□□□ 0.54
Trim3-201ENSMUST00000057525 Aknad1E9Q8N6 675 aa18.45■□□□□ 0.54
Trim3-201ENSMUST00000057525 Gm4340L7N2C4 268 aa18.45■□□□□ 0.54
Trim3-201ENSMUST00000057525 Top1mtQ8R4U6 593 aa18.45■□□□□ 0.54
Trim3-201ENSMUST00000057525 Sned1Q70E20 1403 aa18.45■□□□□ 0.54
Trim3-201ENSMUST00000057525 Kiaa0753Q6A000 959 aa18.44■□□□□ 0.54
Trim3-201ENSMUST00000057525 ParvgQ9ERD8 331 aa18.44■□□□□ 0.54
Trim3-201ENSMUST00000057525 Cyp2d10P24456 504 aa18.44■□□□□ 0.54
Trim3-201ENSMUST00000057525 Sept9Q80UG5 583 aa18.44■□□□□ 0.54
Trim3-201ENSMUST00000057525 Kcnq5Q9JK45 933 aa18.44■□□□□ 0.54
Trim3-201ENSMUST00000057525 Cyp3a57D3YYZ0 503 aa18.44■□□□□ 0.54
Trim3-201ENSMUST00000057525 Togaram1Q6A070 1776 aaKnown RBP18.44■□□□□ 0.54
Trim3-201ENSMUST00000057525 Lrp5Q91VN0 1614 aa18.43■□□□□ 0.54
Trim3-201ENSMUST00000057525 Tmc1Q8R4P5 757 aa18.43■□□□□ 0.54
Trim3-201ENSMUST00000057525 Hmgb2P30681 210 aaKnown RBP18.43■□□□□ 0.54
Trim3-201ENSMUST00000057525 Ddx11Q6AXC6 880 aa18.43■□□□□ 0.54
Trim3-201ENSMUST00000057525 Kcnq3Q8K3F6 873 aa18.43■□□□□ 0.54
Trim3-201ENSMUST00000057525 Hoxa7P02830 229 aa18.42■□□□□ 0.54
Trim3-201ENSMUST00000057525 Ercc3P49135 783 aa18.42■□□□□ 0.54
Trim3-201ENSMUST00000057525 Sh3bp5lQ99LH9 392 aa18.42■□□□□ 0.54
Trim3-201ENSMUST00000057525 Sptbn5F6UCX4 1208 aa18.42■□□□□ 0.54
Trim3-201ENSMUST00000057525 Dydc2Q9D3X8 139 aa18.42■□□□□ 0.54
Trim3-201ENSMUST00000057525 Irs4Q9Z0Y7 1216 aa18.42■□□□□ 0.54
Trim3-201ENSMUST00000057525 Prdm11A2AGX3 565 aa18.41■□□□□ 0.54
Trim3-201ENSMUST00000057525 Pla2g4fQ50L41 855 aa18.41■□□□□ 0.54
Trim3-201ENSMUST00000057525 Fam160b2Q80YR2 744 aa18.41■□□□□ 0.54
Trim3-201ENSMUST00000057525 Mctp2Q5RJH2 878 aa18.41■□□□□ 0.54
Trim3-201ENSMUST00000057525 Pde3bQ61409 1100 aa18.41■□□□□ 0.54
Trim3-201ENSMUST00000057525 Ppp1r9bQ6R891 817 aaKnown RBP18.41■□□□□ 0.54
Trim3-201ENSMUST00000057525 OscarQ8VBT3 265 aa18.41■□□□□ 0.54
Trim3-201ENSMUST00000057525 Trim56Q80VI1 734 aaKnown RBP18.41■□□□□ 0.54
Trim3-201ENSMUST00000057525 Lmod1Q8BVA4 595 aa18.41■□□□□ 0.54
Trim3-201ENSMUST00000057525 Rdm1Q9CQK3 281 aa18.41■□□□□ 0.54
Trim3-201ENSMUST00000057525 Casz1Q9CWL2 1761 aa18.4■□□□□ 0.54
Trim3-201ENSMUST00000057525 Zkscan16A2ALW2 728 aa18.4■□□□□ 0.54
Trim3-201ENSMUST00000057525 Atp6v0a2P15920 856 aa18.4■□□□□ 0.54
Trim3-201ENSMUST00000057525 Fam83bQ0VBM2 1012 aa18.4■□□□□ 0.54
Trim3-201ENSMUST00000057525 Psd3Q2PFD7 1037 aa18.4■□□□□ 0.54
Trim3-201ENSMUST00000057525 Cfap44E9Q5M6 1843 aa18.4■□□□□ 0.54
Trim3-201ENSMUST00000057525 Il15P48346 162 aa18.4■□□□□ 0.54
Trim3-201ENSMUST00000057525 Setdb1O88974 1307 aa18.4■□□□□ 0.54
Trim3-201ENSMUST00000057525 Phactr2B1AVP0 632 aa18.39■□□□□ 0.54
Trim3-201ENSMUST00000057525 Gm10093D3YYI8 482 aa18.39■□□□□ 0.54
Trim3-201ENSMUST00000057525 Hdac1O09106 482 aaKnown RBP18.39■□□□□ 0.54
Trim3-201ENSMUST00000057525 Prl3d1P18121 224 aa18.39■□□□□ 0.54
Trim3-201ENSMUST00000057525 Fhdc1Q3ULZ2 1149 aa18.39■□□□□ 0.54
Trim3-201ENSMUST00000057525 Edrf1Q6GQV7 1239 aa18.39■□□□□ 0.54
Trim3-201ENSMUST00000057525 Map10Q8BJS7 891 aa18.39■□□□□ 0.54
Trim3-201ENSMUST00000057525 Plcd4Q8K3R3 807 aa18.39■□□□□ 0.54
Trim3-201ENSMUST00000057525 Mapkapk5O54992 473 aa18.39■□□□□ 0.53
Trim3-201ENSMUST00000057525 Ifit2Q64112 472 aa18.39■□□□□ 0.53
Trim3-201ENSMUST00000057525 Fchsd1Q6PFY1 688 aa18.39■□□□□ 0.53
Trim3-201ENSMUST00000057525 Col4a5Q63ZW6 1691 aa18.39■□□□□ 0.53
Trim3-201ENSMUST00000057525 Mtcl1Q3UHU5 1945 aa18.39■□□□□ 0.53
Trim3-201ENSMUST00000057525 Rfx1P48377 963 aa18.39■□□□□ 0.53
Trim3-201ENSMUST00000057525 Mb21d2Q8C525 428 aa18.39■□□□□ 0.53
Trim3-201ENSMUST00000057525 Zbtb7aO88939 569 aaKnown RBP18.38■□□□□ 0.53
Trim3-201ENSMUST00000057525 Chrna5Q2MKA5 467 aa18.38■□□□□ 0.53
Trim3-201ENSMUST00000057525 Tbc1d7Q9D0K0 293 aa18.38■□□□□ 0.53
Trim3-201ENSMUST00000057525 Rhbdl3P58873 404 aa18.38■□□□□ 0.53
Trim3-201ENSMUST00000057525 Rad50P70388 1312 aa18.37■□□□□ 0.53
Trim3-201ENSMUST00000057525 Rbm8a2A0A0N4SUH6 174 aa18.37■□□□□ 0.53
Trim3-201ENSMUST00000057525 EngaseQ8BX80 734 aa18.37■□□□□ 0.53
Trim3-201ENSMUST00000057525 Riok1Q922Q2 567 aa18.37■□□□□ 0.53
Trim3-201ENSMUST00000057525 Rbm8aQ9CWZ3 174 aa18.37■□□□□ 0.53
Trim3-201ENSMUST00000057525 Mroh6V9GX81 722 aa18.37■□□□□ 0.53
Trim3-201ENSMUST00000057525 Ugt1a5B2RT14 529 aa18.37■□□□□ 0.53
Trim3-201ENSMUST00000057525 Glg1Q61543 1175 aaKnown RBP18.37■□□□□ 0.53
Trim3-201ENSMUST00000057525 Ube3cQ80U95 1083 aa18.37■□□□□ 0.53
Trim3-201ENSMUST00000057525 Ppm1fQ8CGA0 452 aa18.37■□□□□ 0.53
Trim3-201ENSMUST00000057525 Gdf11Q9Z1W4 405 aa18.37■□□□□ 0.53
Trim3-201ENSMUST00000057525 Letm1Q9Z2I0 738 aa18.37■□□□□ 0.53
Trim3-201ENSMUST00000057525 Ankrd63A2ARS0 390 aa18.36■□□□□ 0.53
Trim3-201ENSMUST00000057525 F2rP30558 430 aa18.36■□□□□ 0.53
Trim3-201ENSMUST00000057525 Fbxo3Q9DC63 480 aa18.36■□□□□ 0.53
Retrieved 100 of 22,080 RNA–protein pairs in 20.8 ms