RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Cep55Q8BT07 462 aa11.35□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Otud6bQ8K2H2 294 aa11.35□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 GptQ8QZR5 496 aa11.35□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Ccdc94Q9D6J3 314 aa11.35□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Adcy9P51830 1353 aa11.34□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Stxbp4Q9WV89 557 aa11.34□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Frat1P70339 274 aa11.34□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 VeztQ3ZK22 780 aa11.34□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 CtcfQ61164 736 aaKnown RBP11.34□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Calcoco2A2A6M5 331 aa11.34□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 NefhP19246 1090 aa11.34□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Mtmr3Q8K296 1196 aa11.34□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Sil1Q9EPK6 465 aa11.34□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 Slit3Q9WVB4 1523 aa11.34□□□□□ -0.59
Pcdh1-201ENSMUST00000057185 DbnlQ62418 436 aa11.33□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Ano10Q8BH79 659 aa11.33□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Rbm28Q8CGC6 750 aaKnown RBP11.33□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Dis3l2Q8CI75 870 aaKnown RBP11.33□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Cdc45Q9Z1X9 566 aa11.33□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Mtx1P47802 317 aa11.33□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Znf653Q6YND2 615 aa11.33□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Zfp113Q8C689 439 aa11.33□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Ddx27Q921N6 760 aaKnown RBP11.33□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Ncbp1Q3UYV9 790 aaKnown RBP11.32□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Kcna6Q61923 529 aa11.32□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Krt25Q8VCW2 446 aa11.32□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Cwc25Q9DBF7 416 aa11.32□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Abcc4E9Q236 1325 aa11.32□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Card6E9PWH2 1175 aa11.32□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 RictorQ6QI06 1708 aa11.32□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Lrrc2Q8VDB8 371 aa11.32□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Aox2Q5SGK3 1345 aa11.32□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Igfbp6P47880 238 aa11.32□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Arid5bQ8BM75 1188 aaKnown RBP11.32□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Rps6ka5Q8C050 863 aa11.32□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 DymQ8CHY3 669 aa11.32□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Tmc2Q8R4P4 888 aa11.32□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Msh6P54276 1358 aaKnown RBP11.32□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Ccdc102aQ3TMW1 549 aa11.31□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Ccnl1Q52KE7 532 aaKnown RBP11.31□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 HellsQ60848 821 aa11.31□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Nxf7Q80SZ6 620 aaKnown RBP11.31□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Tmem119Q8R138 280 aa11.31□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Irx4Q9QY61 515 aa11.31□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 1700113H08RikE9Q9Q5 327 aa11.31□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Gm21969J3QJZ1 289 aa11.31□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Anxa1P10107 346 aaKnown RBP11.31□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Tnni2P13412 182 aa11.31□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Hspa1lP16627 641 aa11.31□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Card10P58660 1021 aa11.31□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 RgmbQ7TQ33 436 aa11.31□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Slc5a4bQ91ZP4 660 aa11.31□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 TnrQ8BYI9 1358 aa11.31□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 L1td1Q587J6 782 aaKnown RBP11.31□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Zkscan4Q5SZT6 480 aa11.31□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Rab3gap1Q80UJ7 981 aa11.31□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Lmod1Q8BVA4 595 aa11.31□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 E4f1Q8CCE9 783 aa11.31□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Add3Q9QYB5 706 aaKnown RBP11.31□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Dnm1P39053 867 aa11.3□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Tpm1P58771 284 aa11.3□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 NpeppsQ11011 920 aa11.3□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Mns1Q61884 491 aa11.3□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Pcdhb15Q91Y04 786 aa11.3□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Aox1O54754 1333 aa11.3□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Atp8b3Q6UQ17 1335 aa11.3□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Eef2kO08796 724 aa11.3□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Cers3Q1A3B0 383 aa11.3□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Prdm1Q60636 856 aa11.3□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Lamb3Q61087 1168 aa11.3□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Cep120Q7TSG1 988 aa11.3□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Terf2ipQ91VL8 393 aa11.3□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Pnpla7A2AJ88 1352 aa11.3□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Acnat2Q8BGG9 420 aa11.3□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Vps18Q8R307 973 aa11.3□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 SdsQ8VBT2 327 aa11.3□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Add2Q9QYB8 725 aa11.3□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Syde2E9PUP1 1314 aa11.3□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Abcc12Q80WJ6 1366 aa11.3□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Dnajc25A2ALW5 357 aa11.29□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Snw1Q9CSN1 536 aaKnown RBP11.29□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 AceP09470 1312 aa11.29□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 1700006A11RikB9EHI3 544 aa11.29□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Iqsec3Q3TES0 1195 aa11.29□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Ctdnep1Q3TP92 244 aa11.29□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Bag1Q60739 355 aa11.29□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Myl10Q62082 202 aa11.29□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Gnl3lQ6PGG6 577 aaKnown RBP11.29□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Evc2Q8K1G2 1220 aa11.29□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Atp2b1G5E829 1220 aa11.29□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Sult6b1P0CC03 303 aa11.29□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Usp28Q5I043 1051 aa11.29□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Dusp9Q7TNL7 452 aa11.29□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Ccp110Q7TSH4 1004 aa11.29□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Kansl3A2RSY1 903 aaKnown RBP11.29□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Lekr1B2RVN1 116 aa11.29□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Csrnp1P59054 583 aa11.29□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 ImmtQ8CAQ8 757 aaKnown RBP11.29□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Osbpl5Q9ER64 874 aa11.29□□□□□ -0.6
Pcdh1-201ENSMUST00000057185 Ces1hD3Z298 562 aa11.28□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 25.6 ms