RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 4930572O03RikQ8C5Y0 211 aa17.71■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Slc7a3P70423 618 aa17.71■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Ndufab1Q9CR21 156 aa17.71■□□□□ 0.43
Ubr3-201ENSMUST00000055758 HhatQ8BMT9 499 aa17.71■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Nop56Q9D6Z1 580 aaKnown RBP17.71■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Nkx1-2P42580 305 aa17.71■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Myo6Q64331 1265 aa17.71■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Prpf31Q8CCF0 499 aaKnown RBP17.71■□□□□ 0.43
Ubr3-201ENSMUST00000055758 Iqca1lA6H690 825 aa17.7■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Cep57Q8CEE0 500 aa17.7■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Oas2E9Q9A9 742 aa17.7■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Gtpbp10Q8K013 366 aa17.7■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Dbn1Q9QXS6 706 aa17.7■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Btn2a2A4QPC6 514 aa17.7■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Tekt2Q922G7 430 aa17.7■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Rsph3bQ9DA80 389 aa17.7■□□□□ 0.42
Ubr3-201ENSMUST00000055758 LlphQ9D945 130 aaKnown RBP17.7■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Tubb4bP68372 445 aaKnown RBP17.7■□□□□ 0.42
Ubr3-201ENSMUST00000055758 EsrrbQ61539 433 aa17.7■□□□□ 0.42
Ubr3-201ENSMUST00000055758 NsmfQ99NF2 532 aa17.7■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Nudcd3Q8R1N4 363 aa17.7■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Adcy3Q8VHH7 1145 aa17.7■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Basp1Q91XV3 226 aa17.7■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Rsph10bE9PYQ0 876 aa17.69■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Cracr2aQ3UP38 310 aa17.69■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Luc7l2Q7TNC4 392 aaKnown RBP17.69■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Ccdc152E9PX14 254 aa17.69■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Zc4h2Q68FG0 224 aa17.69■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Ccdc57Q6PHN1 1016 aa17.69■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Hmg20bQ9Z104 317 aa17.69■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Cct6bQ61390 531 aa17.69■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Arfgap2Q99K28 520 aa17.69■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Cttnbp2B9EJA2 1648 aa17.69■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Rimbp2Q80U40 1072 aa17.69■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Rab44Q8CB87 725 aa17.69■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Hs2st1Q8R3H7 356 aa17.69■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Ccdc124Q9D8X2 217 aaKnown RBP17.69■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Sh3bp1P55194 680 aa17.69■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Gm10378F6XQQ1 160 aa17.68■□□□□ 0.42
Ubr3-201ENSMUST00000055758 CenppQ9CZ92 286 aa17.68■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Tagap1P0CAX8 505 aa17.68■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Fgfr1opQ66JX5 399 aa17.68■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Riok3Q9DBU3 519 aaKnown RBP17.68■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Pik3ap1Q9EQ32 811 aa17.68■□□□□ 0.42
Ubr3-201ENSMUST00000055758 S100bP50114 92 aa17.68■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Gm21985Q6P6P5 1106 aa17.68■□□□□ 0.42
Ubr3-201ENSMUST00000055758 HgsQ99LI8 775 aa17.68■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Proca1B0QZF7 307 aa17.68■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Enox2Q8R0Z2 598 aa17.68■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Tldc2A2ACG1 198 aa17.68■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Nop9Q8BMC4 636 aaKnown RBP17.68■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Krt79Q8VED5 531 aa17.68■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Ppfia1B2RXQ2 1266 aa17.68■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Asic1Q6NXK8 526 aa17.68■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Ccdc14Q8K2J4 934 aa17.67■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Ccdc91Q9D8L5 442 aa17.67■□□□□ 0.42
Ubr3-201ENSMUST00000055758 PpanQ91YU8 470 aaKnown RBP17.67■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Mcur1Q9CXD6 340 aa17.67■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Tbc1d8bA3KGB4 1114 aa17.67■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Tubb4aQ9D6F9 444 aa17.67■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Ccdc129Q14B48 1034 aa17.67■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Ccdc155Q80VJ8 648 aa17.67■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Zbtb41Q811F1 908 aa17.67■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Pde6cQ91ZQ1 861 aa17.67■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Cep83Q9D5R3 692 aa17.67■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Slx4ipQ9D7Y9 413 aa17.67■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Map3k2Q61083 619 aa17.67■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Nap1l4Q78ZA7 375 aaKnown RBP17.67■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Usp5P56399 858 aaKnown RBP17.67■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Arhgap24Q8C4V1 747 aa17.67■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Gadd45bP22339 160 aa17.67■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Rnf168Q80XJ2 565 aa17.67■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Golga1Q9CW79 758 aa17.67■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Tcerg1lQ3B807 590 aa17.66■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Fhdc1Q3ULZ2 1149 aa17.66■□□□□ 0.42
Ubr3-201ENSMUST00000055758 SkiQ60698 725 aa17.66■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Ccdc92Q8VDN4 314 aa17.66■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Igbp1Q61249 340 aa17.66■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Sugp2Q8CH09 1067 aa17.66■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Plcb3P51432 1234 aaKnown RBP17.66■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Bloc1s4Q8VED2 215 aa17.66■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Epb41l2O70318 988 aaKnown RBP17.66■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Zfp91Q62511 572 aa17.66■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Golga5Q9QYE6 729 aa17.66■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Krt8P11679 490 aaKnown RBP17.66■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Swap70Q6A028 585 aaKnown RBP17.66■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Snd1Q78PY7 910 aaKnown RBP17.66■□□□□ 0.42
Ubr3-201ENSMUST00000055758 WtapQ9ER69 396 aa17.66■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Art2aP17981 287 aa17.65■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Eps15P42567 897 aa17.65■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Map3k9Q3U1V8 1077 aa17.65■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Trak2Q6P9N8 913 aa17.65■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Jph4Q80WT0 628 aa17.65■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Krt20Q9D312 431 aa17.65■□□□□ 0.42
Ubr3-201ENSMUST00000055758 ClgnP52194 611 aa17.65■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Mcm10Q0VBD2 885 aa17.65■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Zfyve27Q3TXX3 415 aa17.65■□□□□ 0.42
Ubr3-201ENSMUST00000055758 Ptgs1P22437 602 aa17.64■□□□□ 0.41
Ubr3-201ENSMUST00000055758 Ccdc114Q3UX62 658 aa17.64■□□□□ 0.41
Ubr3-201ENSMUST00000055758 WaplQ65Z40 1200 aaKnown RBP17.64■□□□□ 0.41
Retrieved 100 of 22,080 RNA–protein pairs in 16.6 ms