RNA–Protein interactions for RNA: ENSMUST00000053856.5

Pcdhb17-201, Transcript of MCG141290, mousemouse

APPRIS P1 BASIC

Gene Pcdhb17, Length 4,660 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17-201ENSMUST00000053856 Ssfa2Q922B9 1252 aa13.01□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Ktn1Q61595 1327 aaKnown RBP13.01□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Kif1bQ60575 1816 aaKnown RBP13.01□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Fam135bQ9DAI6 1403 aa13□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 IntuQ059U7 942 aa13□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Gas2l3Q3UWW6 683 aa13□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Trim25Q61510 634 aaKnown RBP13□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Ttc12Q8BW49 704 aa13□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Ufl1Q8CCJ3 793 aaKnown RBP13□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Mipol1Q9D9F8 279 aa13□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Pdzd9Q9D9M4 266 aa13□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Zkscan7E9PVW1 718 aa13□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Neurl4Q5NCX5 1563 aa13□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Bcar3Q9QZK2 820 aa13□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Homer1Q9Z2Y3 366 aa13□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Dnajc5P60904 198 aa13□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Tmtc2Q56A06 836 aa13□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Gas2l2Q5SSG4 860 aa13□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Mrps27Q8BK72 415 aaKnown RBP13□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Ctage5Q8R311 779 aa13□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Ccdc83Q9D4V3 305 aa13□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Igbp1bQ9QZ29 343 aa13□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 IncenpQ9WU62 880 aa13□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Abcc12Q80WJ6 1366 aa12.99□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 AceP09470 1312 aa12.99□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Mast3Q3U214 1321 aa12.99□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Ier5O89113 308 aa12.99□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Kiaa1211Q5PR69 1207 aa12.99□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Mpp4Q6P7F1 635 aa12.99□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Triml1Q8BVP1 470 aa12.99□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 OscarQ8VBT3 265 aa12.99□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Abcc3B2RX12 1523 aa12.99□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Trim28Q62318 834 aa12.99□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Adcy5P84309 1262 aa12.99□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Trim27Q62158 513 aa12.99□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Abcf1Q6P542 837 aaKnown RBP12.99□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Smarcc2Q6PDG5 1213 aa12.99□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Cnot6lQ8VEG6 555 aa12.99□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Lzts2Q91YU6 671 aa12.99□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Cdca7Q9D0M2 382 aa12.99□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Plbd2Q3TCN2 594 aa12.98□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Fnbp4Q6ZQ03 1031 aa12.98□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Galnt17Q7TT15 598 aa12.98□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Ccar2Q8VDP4 922 aaKnown RBP12.98□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Bloc1s2Q9CWG9 143 aa12.98□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Slc17a8Q8BFU8 601 aa12.98□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Ccdc122Q8BVN0 290 aa12.98□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Mylk2Q8VCR8 613 aa12.98□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Hdac6Q9Z2V5 1149 aa12.98□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Atp6v1aP50516 617 aaKnown RBP12.98□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Sh3d21Q7TSG5 549 aa12.98□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Miga2Q8BK03 593 aa12.98□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 CenppQ9CZ92 286 aa12.98□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 EvcP57680 1005 aa12.98□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Paxbp1P58501 919 aa12.98□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Sass6Q80UK7 654 aa12.98□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 PaoxQ8C0L6 504 aa12.98□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Tmem119Q8R138 280 aa12.98□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 TsksO54887 585 aa12.97□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Asic4Q7TNS7 539 aa12.97□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Ccdc181Q80ZU5 509 aa12.97□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Rnf187Q8BFX1 236 aa12.97□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Pcdhb22Q91XZ8 794 aa12.97□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Usp54Q8BL06 1588 aaKnown RBP12.97□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Ncapd2Q8K2Z4 1392 aa12.97□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Pim2Q62070 370 aa12.97□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Clip2Q9Z0H8 1047 aa12.97□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Abca16E9PWJ7 1678 aa12.97□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Haus2Q9CQS9 234 aa12.97□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Glt1d1A4FUP9 346 aa12.96□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Secisbp2lQ6A098 1086 aaKnown RBP12.96□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Ppp1r10Q80W00 888 aaKnown RBP12.96□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Rnf17Q99MV7 1640 aa12.96□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Abtb2Q7TQI7 1024 aa12.96□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Shtn1Q8K2Q9 631 aa12.96□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 BrapQ99MP8 591 aa12.96□□□□□ -0.33
Pcdhb17-201ENSMUST00000053856 Uri1Q3TLD5 531 aa12.96□□□□□ -0.34
Pcdhb17-201ENSMUST00000053856 Zranb1Q7M760 708 aa12.96□□□□□ -0.34
Pcdhb17-201ENSMUST00000053856 Bst2Q8R2Q8 172 aa12.96□□□□□ -0.34
Pcdhb17-201ENSMUST00000053856 Tmc2Q8R4P4 888 aa12.96□□□□□ -0.34
Pcdhb17-201ENSMUST00000053856 Stx6Q9JKK1 255 aa12.96□□□□□ -0.34
Pcdhb17-201ENSMUST00000053856 Zbtb22Q9Z0G7 638 aa12.96□□□□□ -0.34
Pcdhb17-201ENSMUST00000053856 Cdhr2E9Q7P9 1308 aa12.96□□□□□ -0.34
Pcdhb17-201ENSMUST00000053856 Ddx31Q6NZQ2 687 aaKnown RBP12.95□□□□□ -0.34
Pcdhb17-201ENSMUST00000053856 Prkab2Q6PAM0 271 aa12.95□□□□□ -0.34
Pcdhb17-201ENSMUST00000053856 Tekt3Q6X6Z7 490 aa12.95□□□□□ -0.34
Pcdhb17-201ENSMUST00000053856 FancaQ9JL70 1439 aa12.95□□□□□ -0.34
Pcdhb17-201ENSMUST00000053856 Ube2hP62257 183 aa12.95□□□□□ -0.34
Pcdhb17-201ENSMUST00000053856 Zbtb38Q3LR78 1197 aa12.95□□□□□ -0.34
Pcdhb17-201ENSMUST00000053856 IqcgQ80W32 419 aa12.95□□□□□ -0.34
Pcdhb17-201ENSMUST00000053856 Clasp1Q80TV8 1535 aaKnown RBP12.95□□□□□ -0.34
Pcdhb17-201ENSMUST00000053856 Ccdc85cE9Q6B2 420 aa12.95□□□□□ -0.34
Pcdhb17-201ENSMUST00000053856 Frat2Q8K025 231 aa12.95□□□□□ -0.34
Pcdhb17-201ENSMUST00000053856 Mmel1Q9JLI3 765 aa12.95□□□□□ -0.34
Pcdhb17-201ENSMUST00000053856 Stox1B2RQL2 990 aa12.95□□□□□ -0.34
Pcdhb17-201ENSMUST00000053856 Nucb2P81117 420 aa12.95□□□□□ -0.34
Pcdhb17-201ENSMUST00000053856 Pym1Q8CHP5 203 aaKnown RBP12.95□□□□□ -0.34
Pcdhb17-201ENSMUST00000053856 Zbtb3Q91X45 518 aa12.95□□□□□ -0.34
Pcdhb17-201ENSMUST00000053856 Hecw1Q8K4P8 1604 aa12.95□□□□□ -0.34
Pcdhb17-201ENSMUST00000053856 Arhgap23Q69ZH9 1483 aa12.94□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 28.9 ms