RNA–Protein interactions for RNA: ENSMUST00000053414.12

Ccdc171-201, Transcript of Coiled-coil domain-containing protein 171, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Ccdc171, Length 4,525 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc171-201ENSMUST00000053414 Wdr3Q8BHB4 942 aaKnown RBP10.78□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Pnpla2Q8BJ56 486 aa10.78□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 TnmdQ9EP64 317 aa10.78□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Rai14Q9EP71 979 aaKnown RBP10.78□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Slit3Q9WVB4 1523 aa10.78□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Myh15E9Q264 1925 aa10.78□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Fbxl16A2RT62 479 aa10.78□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Atp8b5A3FIN4 1183 aa10.78□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Brf1Q8CFK2 676 aa10.78□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Eif2ak3Q9Z2B5 1114 aa10.78□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Myh13B1AR69 1938 aa10.78□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Rbm8a2A0A0N4SUH6 174 aa10.78□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Gm973E9Q295 1059 aa10.78□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Hoxb7P09024 217 aa10.78□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Gimap6Q8K349 305 aa10.78□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 TatQ8QZR1 454 aa10.78□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Rbm8aQ9CWZ3 174 aa10.78□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Cdc37Q61081 379 aa10.77□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Alg3Q8K2A8 438 aa10.77□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Bloc1s2Q9CWG9 143 aa10.77□□□□□ -0.68
Ccdc171-201ENSMUST00000053414 Arhgef1Q61210 920 aaKnown RBP10.77□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 1700017N19RikA0A087WPJ1 469 aa10.77□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Atp1a3Q6PIC6 1013 aa10.77□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 StrbpQ91WM1 672 aaKnown RBP10.77□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Nckap5lQ6GQX2 1323 aa10.76□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Clec11aO88200 328 aa10.76□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Taf3Q5HZG4 932 aa10.76□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Ehd2Q8BH64 543 aa10.76□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Rapgef3Q8VCC8 918 aa10.76□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Arl8aQ8VEH3 186 aa10.76□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Aox2Q5SGK3 1345 aa10.76□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Eya1P97767 591 aa10.76□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Ctnna3Q65CL1 895 aa10.76□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Rps6kb1Q8BSK8 525 aa10.76□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Hps3Q91VB4 1002 aa10.76□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 NagaQ9QWR8 415 aa10.76□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Dnajc2P54103 621 aaKnown RBP10.76□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Q8BZJ8 459 aa10.76□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Grin2dQ03391 1323 aa10.76□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Gm21698A0A087WQP8 267 aa10.76□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Gm21671G3UY31 267 aa10.76□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Ets1P27577 440 aa10.76□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Recql4Q75NR7 1216 aaKnown RBP10.76□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Ubr2Q6WKZ8 1755 aa10.75□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 MccE9PWI3 1003 aa10.75□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Hsp90b1P08113 802 aaKnown RBP10.75□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Cyp2d10P24456 504 aa10.75□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Pa2g4P50580 394 aaKnown RBP10.75□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 4930504O13RikQ8C5Z9 145 aa10.75□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Vnn1Q9Z0K8 512 aa10.75□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Xpo4Q9ESJ0 1151 aa10.75□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 ChmQ9QXG2 665 aa10.75□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Ano10Q8BH79 659 aa10.75□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Ano1Q8BHY3 960 aa10.75□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Filip1Q9CS72 1211 aa10.75□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Tcof1O08784 1320 aaKnown RBP10.75□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Q66JV7 365 aa10.74□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Top1mtQ8R4U6 593 aa10.74□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Trim59Q922Y2 403 aa10.74□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Ric1Q69ZJ7 1422 aa10.74□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Chpf2Q3UU43 768 aa10.74□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Dpf2Q61103 391 aaKnown RBP10.74□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Cep89Q9CZX2 791 aa10.74□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Abcb6Q9DC29 842 aa10.74□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Myo1cQ9WTI7 1063 aa10.74□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Srgap1Q91Z69 1062 aa10.74□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Large1Q9Z1M7 756 aa10.74□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Cdc27A2A6Q5 825 aa10.74□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Lrrc6O88978 473 aa10.74□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Trak2Q6P9N8 913 aa10.74□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Ddx27Q921N6 760 aaKnown RBP10.74□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 NaspQ99MD9 773 aaKnown RBP10.74□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Mrvi1Q9WUX5 899 aaKnown RBP10.74□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Mybbp1aQ7TPV4 1344 aaKnown RBP10.73□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Zap70P43404 618 aa10.73□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Stk31Q99MW1 1018 aa10.73□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Zcchc17Q9ESX4 241 aaKnown RBP10.73□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Myh7Q91Z83 1935 aa10.73□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Cspp1B2RX88 1205 aa10.73□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 GnpatP98192 678 aa10.73□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Sh2b1Q91ZM2 756 aa10.73□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Nfat5Q9WV30 1534 aa10.73□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 IkbkbO88351 757 aa10.73□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 RdxP26043 583 aaKnown RBP10.73□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Rrp1P56183 494 aaKnown RBP10.73□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Polr3dQ91WD1 398 aa10.73□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Q9D9S1 216 aa10.73□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Plekhd1B2RPU2 505 aa10.72□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Tbx2Q60707 711 aa10.72□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Ddx11Q6AXC6 880 aa10.72□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Larp1Q6ZQ58 1072 aaKnown RBP10.72□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Zkscan3Q91VW9 553 aa10.72□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Sall1Q9ER74 1322 aa10.72□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Tbc1d2B1AVH7 922 aa10.72□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 LtkP08923 888 aa10.72□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Paxbp1P58501 919 aa10.72□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Irx5Q9JKQ4 484 aa10.72□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Btn2a2A4QPC6 514 aa10.72□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 Mdm2P23804 489 aa10.72□□□□□ -0.69
Ccdc171-201ENSMUST00000053414 ZyxQ62523 564 aa10.72□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 21.2 ms