RNA–Protein interactions for RNA: ENSMUST00000048077.11

Lime1-201, Transcript of Lck-interacting transmembrane adapter 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lime1, Length 1,959 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1-201ENSMUST00000048077 Csrnp1P59054 583 aa16.44■□□□□ 0.22
Lime1-201ENSMUST00000048077 Gm21985Q6P6P5 1106 aa16.44■□□□□ 0.22
Lime1-201ENSMUST00000048077 Plcd3Q8K2J0 785 aa16.44■□□□□ 0.22
Lime1-201ENSMUST00000048077 Rrs1Q9CYH6 365 aaKnown RBP16.44■□□□□ 0.22
Lime1-201ENSMUST00000048077 Exosc10P56960 887 aaKnown RBP16.43■□□□□ 0.22
Lime1-201ENSMUST00000048077 Snx13Q6PHS6 957 aa16.43■□□□□ 0.22
Lime1-201ENSMUST00000048077 Golim4Q8BXA1 655 aa16.43■□□□□ 0.22
Lime1-201ENSMUST00000048077 Casz1Q9CWL2 1761 aa16.42■□□□□ 0.22
Lime1-201ENSMUST00000048077 Hap1O35668 628 aa16.42■□□□□ 0.22
Lime1-201ENSMUST00000048077 CgnP59242 1191 aa16.42■□□□□ 0.22
Lime1-201ENSMUST00000048077 Znf692Q3U381 531 aa16.42■□□□□ 0.22
Lime1-201ENSMUST00000048077 Atad2Q8CDM1 1040 aa16.42■□□□□ 0.22
Lime1-201ENSMUST00000048077 Mtmr3Q8K296 1196 aa16.42■□□□□ 0.22
Lime1-201ENSMUST00000048077 Zbtb22Q9Z0G7 638 aa16.42■□□□□ 0.22
Lime1-201ENSMUST00000048077 Prl7a2O54831 253 aa16.42■□□□□ 0.22
Lime1-201ENSMUST00000048077 Tyro3P55144 880 aa16.42■□□□□ 0.22
Lime1-201ENSMUST00000048077 NpeppsQ11011 920 aa16.42■□□□□ 0.22
Lime1-201ENSMUST00000048077 Ccdc129Q14B48 1034 aa16.42■□□□□ 0.22
Lime1-201ENSMUST00000048077 Mrpl44Q9CY73 333 aaKnown RBP16.42■□□□□ 0.22
Lime1-201ENSMUST00000048077 TnmdQ9EP64 317 aa16.42■□□□□ 0.22
Lime1-201ENSMUST00000048077 Arap2Q8BZ05 1703 aa16.41■□□□□ 0.22
Lime1-201ENSMUST00000048077 Lins1Q3U1D0 764 aa16.41■□□□□ 0.22
Lime1-201ENSMUST00000048077 Gnl3lQ6PGG6 577 aaKnown RBP16.41■□□□□ 0.22
Lime1-201ENSMUST00000048077 Ncaph2Q8BSP2 607 aa16.41■□□□□ 0.22
Lime1-201ENSMUST00000048077 Zfp317Q8C0Q5 607 aa16.41■□□□□ 0.22
Lime1-201ENSMUST00000048077 Amigo3Q8C2S7 508 aa16.41■□□□□ 0.22
Lime1-201ENSMUST00000048077 Ripk4Q9ERK0 786 aa16.41■□□□□ 0.22
Lime1-201ENSMUST00000048077 Hmgn5Q9JL35 406 aa16.41■□□□□ 0.22
Lime1-201ENSMUST00000048077 Mmel1Q9JLI3 765 aa16.41■□□□□ 0.22
Lime1-201ENSMUST00000048077 Ubn2Q80WC1 1314 aa16.41■□□□□ 0.22
Lime1-201ENSMUST00000048077 Cfap58B2RW38 873 aa16.4■□□□□ 0.22
Lime1-201ENSMUST00000048077 Cyp2d10P24456 504 aa16.4■□□□□ 0.22
Lime1-201ENSMUST00000048077 Timm10P62073 90 aa16.4■□□□□ 0.22
Lime1-201ENSMUST00000048077 Hspd1P63038 573 aaKnown RBP16.4■□□□□ 0.22
Lime1-201ENSMUST00000048077 Gm12185Q5NCB2 835 aa16.4■□□□□ 0.22
Lime1-201ENSMUST00000048077 Oxsr1Q6P9R2 527 aa16.4■□□□□ 0.22
Lime1-201ENSMUST00000048077 Cdca8Q8BHX3 289 aa16.4■□□□□ 0.22
Lime1-201ENSMUST00000048077 Trim59Q922Y2 403 aa16.4■□□□□ 0.22
Lime1-201ENSMUST00000048077 Usp42B2RQC2 1324 aaKnown RBP16.4■□□□□ 0.22
Lime1-201ENSMUST00000048077 Wdr19Q3UGF1 1341 aa16.4■□□□□ 0.22
Lime1-201ENSMUST00000048077 1700113H08RikE9Q9Q5 327 aa16.4■□□□□ 0.22
Lime1-201ENSMUST00000048077 Tmem109Q3UBX0 243 aa16.4■□□□□ 0.22
Lime1-201ENSMUST00000048077 Rassf8Q8CJ96 419 aa16.4■□□□□ 0.22
Lime1-201ENSMUST00000048077 Txnrd1Q9JMH6 613 aa16.4■□□□□ 0.22
Lime1-201ENSMUST00000048077 Sh3bp5Q9Z131 463 aa16.4■□□□□ 0.22
Lime1-201ENSMUST00000048077 Pdia4P08003 638 aaKnown RBP16.39■□□□□ 0.21
Lime1-201ENSMUST00000048077 Kif3aP28741 701 aa16.39■□□□□ 0.21
Lime1-201ENSMUST00000048077 AidaQ8C4Q6 305 aa16.39■□□□□ 0.21
Lime1-201ENSMUST00000048077 Chmp3Q9CQ10 224 aa16.39■□□□□ 0.21
Lime1-201ENSMUST00000048077 Crb1Q8VHS2 1405 aa16.39■□□□□ 0.21
Lime1-201ENSMUST00000048077 Ubash3aQ3V3E1 624 aa16.38■□□□□ 0.21
Lime1-201ENSMUST00000048077 Nop14Q8R3N1 860 aaKnown RBP16.38■□□□□ 0.21
Lime1-201ENSMUST00000048077 Rufy2Q8R4C2 606 aa16.38■□□□□ 0.21
Lime1-201ENSMUST00000048077 Carmil3Q3UFQ8 1375 aa16.38■□□□□ 0.21
Lime1-201ENSMUST00000048077 Nav1Q8CH77 1875 aa16.38■□□□□ 0.21
Lime1-201ENSMUST00000048077 Cdhr2E9Q7P9 1308 aa16.38■□□□□ 0.21
Lime1-201ENSMUST00000048077 Scn4aQ9ER60 1841 aa16.38■□□□□ 0.21
Lime1-201ENSMUST00000048077 Gm45140A0A0N4SUM8 220 aa16.38■□□□□ 0.21
Lime1-201ENSMUST00000048077 Slc4a1P04919 929 aa16.38■□□□□ 0.21
Lime1-201ENSMUST00000048077 Plcb3P51432 1234 aaKnown RBP16.38■□□□□ 0.21
Lime1-201ENSMUST00000048077 Nucb2P81117 420 aa16.38■□□□□ 0.21
Lime1-201ENSMUST00000048077 Rab3gap1Q80UJ7 981 aa16.38■□□□□ 0.21
Lime1-201ENSMUST00000048077 Pus3Q9JI38 481 aa16.38■□□□□ 0.21
Lime1-201ENSMUST00000048077 Sh3bgrQ9WUZ7 214 aa16.37■□□□□ 0.21
Lime1-201ENSMUST00000048077 Myh7Q91Z83 1935 aa16.37■□□□□ 0.21
Lime1-201ENSMUST00000048077 Ccdc112A0AUP1 442 aa16.37■□□□□ 0.21
Lime1-201ENSMUST00000048077 Cyp3a57D3YYZ0 503 aa16.37■□□□□ 0.21
Lime1-201ENSMUST00000048077 Wdr78E9PYY5 807 aa16.37■□□□□ 0.21
Lime1-201ENSMUST00000048077 Atp8a2P98200 1148 aa16.37■□□□□ 0.21
Lime1-201ENSMUST00000048077 Ankib1Q6ZPS6 1085 aa16.37■□□□□ 0.21
Lime1-201ENSMUST00000048077 Bicd2Q921C5 820 aa16.37■□□□□ 0.21
Lime1-201ENSMUST00000048077 Zeb2Q9R0G7 1215 aa16.37■□□□□ 0.21
Lime1-201ENSMUST00000048077 Tnrc6cQ3UHC0 1690 aaKnown RBP16.36■□□□□ 0.21
Lime1-201ENSMUST00000048077 TnksQ6PFX9 1320 aa16.36■□□□□ 0.21
Lime1-201ENSMUST00000048077 Mctp1E9PV86 951 aa16.36■□□□□ 0.21
Lime1-201ENSMUST00000048077 Hmx1O70218 332 aa16.36■□□□□ 0.21
Lime1-201ENSMUST00000048077 ErmnQ5EBJ4 281 aa16.36■□□□□ 0.21
Lime1-201ENSMUST00000048077 Nol10Q5RJG1 687 aaKnown RBP16.36■□□□□ 0.21
Lime1-201ENSMUST00000048077 Pms1Q8K119 917 aa16.36■□□□□ 0.21
Lime1-201ENSMUST00000048077 Osbpl5Q9ER64 874 aa16.36■□□□□ 0.21
Lime1-201ENSMUST00000048077 Pard3Q99NH2 1333 aa16.36■□□□□ 0.21
Lime1-201ENSMUST00000048077 TsksO54887 585 aa16.35■□□□□ 0.21
Lime1-201ENSMUST00000048077 Usp28Q5I043 1051 aa16.35■□□□□ 0.21
Lime1-201ENSMUST00000048077 Rps6ka5Q8C050 863 aa16.35■□□□□ 0.21
Lime1-201ENSMUST00000048077 Ubxn4Q8VCH8 506 aa16.35■□□□□ 0.21
Lime1-201ENSMUST00000048077 Nfe2l3Q9WTM4 660 aa16.35■□□□□ 0.21
Lime1-201ENSMUST00000048077 Ltbp4Q8K4G1 1666 aa16.35■□□□□ 0.21
Lime1-201ENSMUST00000048077 Nwd2Q6P5U7 1742 aa16.35■□□□□ 0.21
Lime1-201ENSMUST00000048077 Brpf3B2KF05 1204 aaKnown RBP16.35■□□□□ 0.21
Lime1-201ENSMUST00000048077 Rgs9O54828 675 aa16.35■□□□□ 0.21
Lime1-201ENSMUST00000048077 Clec11aO88200 328 aa16.35■□□□□ 0.21
Lime1-201ENSMUST00000048077 Cep63Q3UPP8 700 aa16.35■□□□□ 0.21
Lime1-201ENSMUST00000048077 Lmbrd2Q8C561 694 aa16.35■□□□□ 0.21
Lime1-201ENSMUST00000048077 Ttc19Q8CC21 365 aa16.35■□□□□ 0.21
Lime1-201ENSMUST00000048077 Rbm17Q8JZX4 405 aaKnown RBP16.35■□□□□ 0.21
Lime1-201ENSMUST00000048077 Gigyf1Q99MR1 1044 aaKnown RBP16.35■□□□□ 0.21
Lime1-201ENSMUST00000048077 Pes1Q9EQ61 584 aaKnown RBP16.35■□□□□ 0.21
Lime1-201ENSMUST00000048077 DmtnQ9WV69 405 aa16.35■□□□□ 0.21
Lime1-201ENSMUST00000048077 Greb1lB9EJV3 1913 aa16.34■□□□□ 0.21
Lime1-201ENSMUST00000048077 Lnx1O70263 728 aa16.34■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms