RNA–Protein interactions for RNA: ENSMUST00000046916.8

Ckap2-201, Transcript of Cytoskeleton-associated protein 2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap2, Length 2,593 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2-201ENSMUST00000046916 Yy1Q00899 414 aa13.42□□□□□ -0.26
Ckap2-201ENSMUST00000046916 Q3TQI7 289 aaKnown RBP13.42□□□□□ -0.26
Ckap2-201ENSMUST00000046916 Foxo3Q9WVH4 672 aa13.42□□□□□ -0.26
Ckap2-201ENSMUST00000046916 Ecm29Q6PDI5 1840 aa13.42□□□□□ -0.26
Ckap2-201ENSMUST00000046916 Stox1B2RQL2 990 aa13.42□□□□□ -0.26
Ckap2-201ENSMUST00000046916 Nom1Q3UFM5 854 aaKnown RBP13.42□□□□□ -0.26
Ckap2-201ENSMUST00000046916 Ddx58Q6Q899 926 aa13.42□□□□□ -0.26
Ckap2-201ENSMUST00000046916 St18Q80TY4 1045 aa13.42□□□□□ -0.26
Ckap2-201ENSMUST00000046916 Echdc1Q9D9V3 322 aa13.42□□□□□ -0.26
Ckap2-201ENSMUST00000046916 Sh3tc1G3X9F6 1346 aa13.42□□□□□ -0.26
Ckap2-201ENSMUST00000046916 PtmaP26350 111 aa13.41□□□□□ -0.26
Ckap2-201ENSMUST00000046916 Filip1lQ6P6L0 1131 aa13.41□□□□□ -0.26
Ckap2-201ENSMUST00000046916 Mapk8ip1Q9WVI9 707 aa13.41□□□□□ -0.26
Ckap2-201ENSMUST00000046916 Gm9992B2RWK3 458 aa13.41□□□□□ -0.26
Ckap2-201ENSMUST00000046916 AK157302I3ITR1 129 aa13.41□□□□□ -0.26
Ckap2-201ENSMUST00000046916 Cct4P80315 539 aaKnown RBP13.41□□□□□ -0.26
Ckap2-201ENSMUST00000046916 Fam83gQ5SWY7 812 aa13.41□□□□□ -0.26
Ckap2-201ENSMUST00000046916 Unc93aQ710D3 458 aa13.41□□□□□ -0.26
Ckap2-201ENSMUST00000046916 Kdm4aQ8BW72 1064 aa13.41□□□□□ -0.26
Ckap2-201ENSMUST00000046916 Isca1Q9D924 129 aa13.41□□□□□ -0.26
Ckap2-201ENSMUST00000046916 Scn9aQ62205 1984 aa13.41□□□□□ -0.26
Ckap2-201ENSMUST00000046916 Gse1Q3U3C9 1213 aa13.4□□□□□ -0.26
Ckap2-201ENSMUST00000046916 HellsQ60848 821 aa13.4□□□□□ -0.26
Ckap2-201ENSMUST00000046916 TrhQ62361 256 aa13.4□□□□□ -0.26
Ckap2-201ENSMUST00000046916 Sf3b3Q921M3 1217 aaKnown RBP13.4□□□□□ -0.26
Ckap2-201ENSMUST00000046916 Mybbp1aQ7TPV4 1344 aaKnown RBP13.4□□□□□ -0.26
Ckap2-201ENSMUST00000046916 Fkbp4P30416 458 aa13.4□□□□□ -0.26
Ckap2-201ENSMUST00000046916 Irf9Q61179 399 aa13.4□□□□□ -0.26
Ckap2-201ENSMUST00000046916 Pnma3Q8JZW8 466 aa13.4□□□□□ -0.26
Ckap2-201ENSMUST00000046916 Tktl2Q9D4D4 627 aa13.4□□□□□ -0.26
Ckap2-201ENSMUST00000046916 Col3a1P08121 1464 aa13.4□□□□□ -0.26
Ckap2-201ENSMUST00000046916 Pde4bB1AWC9 736 aa13.39□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Cyp2c68K7N6C2 491 aa13.39□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Hmox1P14901 289 aa13.39□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Gzf1Q4VBD9 706 aa13.39□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Utp18Q5SSI6 552 aaKnown RBP13.39□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Insm1Q63ZV0 521 aa13.39□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Rbm17Q8JZX4 405 aaKnown RBP13.39□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Pik3ap1Q9EQ32 811 aa13.39□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Ms4a2P20490 235 aa13.39□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Gja5Q01231 358 aa13.39□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Pde3bQ61409 1100 aa13.39□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Ush1cQ9ES64 910 aa13.39□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Trpm7Q923J1 1863 aa13.39□□□□□ -0.27
Ckap2-201ENSMUST00000046916 CltaO08585 235 aa13.38□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Kif4P33174 1231 aa13.38□□□□□ -0.27
Ckap2-201ENSMUST00000046916 EgfrQ01279 1210 aa13.38□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Fhdc1Q3ULZ2 1149 aa13.38□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Ints3Q7TPD0 1041 aaKnown RBP13.38□□□□□ -0.27
Ckap2-201ENSMUST00000046916 WdpcpQ8C456 722 aa13.38□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Foxo4Q9WVH3 505 aa13.38□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Tspoap1Q7TNF8 1846 aa13.38□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Plcb3P51432 1234 aaKnown RBP13.37□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Rbm27Q5SFM8 1060 aaKnown RBP13.37□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Slc39a6Q8C145 765 aa13.37□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Pibf1E9Q6K3 756 aa13.37□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Cwc27Q3TKY6 469 aa13.37□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Tbc1d30Q69ZT9 766 aa13.37□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Mum1Q6DID5 682 aa13.37□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Q8C6G1 249 aa13.37□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Gripap1Q8VD04 806 aa13.37□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Gdpd2Q9ESM6 539 aa13.37□□□□□ -0.27
Ckap2-201ENSMUST00000046916 1700006A11RikB9EHI3 544 aa13.36□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Mmp14P53690 582 aa13.36□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Psd3Q2PFD7 1037 aa13.36□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Vil1Q62468 827 aa13.36□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Atxn2lQ7TQH0 1049 aaKnown RBP13.36□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Susd4Q8BH32 490 aa13.36□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Ppm1mQ8BU27 406 aa13.36□□□□□ -0.27
Ckap2-201ENSMUST00000046916 AfdnQ9QZQ1 1820 aaKnown RBP13.36□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Rad50P70388 1312 aa13.36□□□□□ -0.27
Ckap2-201ENSMUST00000046916 MypnQ5DTJ9 1315 aa13.36□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Ier5O89113 308 aa13.36□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Hsp90b1P08113 802 aaKnown RBP13.36□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Lrch1P62046 709 aa13.36□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Gys2Q8VCB3 704 aa13.36□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Dhx30Q99PU8 1217 aaKnown RBP13.36□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Mtcl1Q3UHU5 1945 aa13.35□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Rbm46P86049 533 aa13.35□□□□□ -0.27
Ckap2-201ENSMUST00000046916 ArsiQ32KI9 573 aa13.35□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Pcsk7Q61139 770 aa13.35□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Pmfbp1Q9WVQ0 1022 aa13.35□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Cyp2ab1S4R196 498 aa13.35□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Cyp2c23E9Q5K4 494 aa13.35□□□□□ -0.27
Ckap2-201ENSMUST00000046916 SrrtQ99MR6 875 aaKnown RBP13.35□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Setdb1O88974 1307 aa13.35□□□□□ -0.27
Ckap2-201ENSMUST00000046916 EvcP57680 1005 aa13.34□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Pdzrn3Q69ZS0 1063 aa13.34□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Ccdc173A0JLY1 547 aa13.34□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Tpx2A2APB8 745 aaKnown RBP13.34□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Zscan25B2RX31 543 aa13.34□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Syce3B5KM66 88 aa13.34□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Becn1O88597 448 aa13.34□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Best3Q6H1V1 669 aa13.34□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Rnf214Q8BFU3 668 aaKnown RBP13.34□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Prune1Q8BIW1 454 aa13.34□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Ptcd1Q8C2E4 695 aaKnown RBP13.34□□□□□ -0.27
Ckap2-201ENSMUST00000046916 E4f1Q8CCE9 783 aa13.34□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Fam184aE9PW83 1143 aa13.33□□□□□ -0.27
Ckap2-201ENSMUST00000046916 Dbndd1Q9CZ00 160 aa13.33□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms