RNA–Protein interactions for RNA: ENSMUST00000034776.12

Cln6-201, Transcript of Ceroid-lipofuscinosis, neuronal 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln6, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6-201ENSMUST00000034776 DekQ7TNV0 380 aaKnown RBP27.47■■□□□ 1.99
Cln6-201ENSMUST00000034776 PogkQ80TC5 607 aa27.47■■□□□ 1.99
Cln6-201ENSMUST00000034776 Ift57Q8BXG3 429 aa27.47■■□□□ 1.99
Cln6-201ENSMUST00000034776 Smarcc1P97496 1104 aa27.46■■□□□ 1.99
Cln6-201ENSMUST00000034776 Fam160b2Q80YR2 744 aa27.46■■□□□ 1.99
Cln6-201ENSMUST00000034776 Rbm17Q8JZX4 405 aaKnown RBP27.46■■□□□ 1.99
Cln6-201ENSMUST00000034776 Dpf1Q9QX66 387 aa27.46■■□□□ 1.99
Cln6-201ENSMUST00000034776 Sept1P42209 366 aa27.46■■□□□ 1.99
Cln6-201ENSMUST00000034776 Snrpa1P57784 255 aaKnown RBP27.46■■□□□ 1.99
Cln6-201ENSMUST00000034776 NgdnQ9DB96 315 aaKnown RBP27.46■■□□□ 1.99
Cln6-201ENSMUST00000034776 Cyp2c23E9Q5K4 494 aa27.45■■□□□ 1.98
Cln6-201ENSMUST00000034776 Ptcd1Q8C2E4 695 aaKnown RBP27.45■■□□□ 1.98
Cln6-201ENSMUST00000034776 Plekho1Q9JIY0 408 aa27.45■■□□□ 1.98
Cln6-201ENSMUST00000034776 Cfap44E9Q5M6 1843 aa27.45■■□□□ 1.98
Cln6-201ENSMUST00000034776 Nhsl1Q8CAF4 1587 aa27.45■■□□□ 1.98
Cln6-201ENSMUST00000034776 4930523C07RikE9Q2T4 99 aa27.44■■□□□ 1.98
Cln6-201ENSMUST00000034776 C4bP01029 1738 aa27.44■■□□□ 1.98
Cln6-201ENSMUST00000034776 Cntnap1O54991 1385 aa27.44■■□□□ 1.98
Cln6-201ENSMUST00000034776 Hspd1P63038 573 aaKnown RBP27.44■■□□□ 1.98
Cln6-201ENSMUST00000034776 Lmbrd2Q8C561 694 aa27.44■■□□□ 1.98
Cln6-201ENSMUST00000034776 Smc3Q9CW03 1217 aaKnown RBP27.44■■□□□ 1.98
Cln6-201ENSMUST00000034776 IncenpQ9WU62 880 aa27.44■■□□□ 1.98
Cln6-201ENSMUST00000034776 Zfp804bA0A0G2JGH6 1343 aa27.44■■□□□ 1.98
Cln6-201ENSMUST00000034776 Cpa2Q504N0 417 aa27.43■■□□□ 1.98
Cln6-201ENSMUST00000034776 Kiaa0319lQ8K135 1048 aa27.43■■□□□ 1.98
Cln6-201ENSMUST00000034776 Tceanc2Q8R2M0 207 aa27.43■■□□□ 1.98
Cln6-201ENSMUST00000034776 Nlrp9aQ66X03 949 aa27.43■■□□□ 1.98
Cln6-201ENSMUST00000034776 Sptlc3Q8BG54 563 aa27.43■■□□□ 1.98
Cln6-201ENSMUST00000034776 Map10Q8BJS7 891 aa27.43■■□□□ 1.98
Cln6-201ENSMUST00000034776 Myh7Q91Z83 1935 aa27.42■■□□□ 1.98
Cln6-201ENSMUST00000034776 Plch1Q4KWH5 1682 aa27.42■■□□□ 1.98
Cln6-201ENSMUST00000034776 Gm13023A2A8N2 498 aa27.42■■□□□ 1.98
Cln6-201ENSMUST00000034776 Npy5rO70342 466 aa27.42■■□□□ 1.98
Cln6-201ENSMUST00000034776 Zc3h12cQ5DTV4 884 aa27.42■■□□□ 1.98
Cln6-201ENSMUST00000034776 Riok1Q922Q2 567 aa27.42■■□□□ 1.98
Cln6-201ENSMUST00000034776 Ube3bQ9ES34 1070 aa27.42■■□□□ 1.98
Cln6-201ENSMUST00000034776 Mapk8ip1Q9WVI9 707 aa27.42■■□□□ 1.98
Cln6-201ENSMUST00000034776 Prl7a2O54831 253 aa27.41■■□□□ 1.98
Cln6-201ENSMUST00000034776 Lrrc43Q3V0L5 667 aa27.41■■□□□ 1.98
Cln6-201ENSMUST00000034776 ImpactO55091 318 aa27.41■■□□□ 1.98
Cln6-201ENSMUST00000034776 Afg3l2Q8JZQ2 802 aaKnown RBP27.41■■□□□ 1.98
Cln6-201ENSMUST00000034776 Gripap1Q8VD04 806 aa27.4■■□□□ 1.98
Cln6-201ENSMUST00000034776 Irgm2A0A140LIF8 407 aa27.4■■□□□ 1.98
Cln6-201ENSMUST00000034776 Eef2kO08796 724 aa27.4■■□□□ 1.98
Cln6-201ENSMUST00000034776 Prl3d1P18121 224 aa27.4■■□□□ 1.98
Cln6-201ENSMUST00000034776 Il17raQ60943 864 aa27.4■■□□□ 1.98
Cln6-201ENSMUST00000034776 Trim56Q80VI1 734 aaKnown RBP27.4■■□□□ 1.98
Cln6-201ENSMUST00000034776 Sh3bp5Q9Z131 463 aa27.4■■□□□ 1.98
Cln6-201ENSMUST00000034776 Tmx3Q8BXZ1 456 aa27.39■■□□□ 1.98
Cln6-201ENSMUST00000034776 AidaQ8C4Q6 305 aa27.39■■□□□ 1.98
Cln6-201ENSMUST00000034776 Tubb6Q922F4 447 aa27.39■■□□□ 1.98
Cln6-201ENSMUST00000034776 Setdb1O88974 1307 aa27.38■■□□□ 1.97
Cln6-201ENSMUST00000034776 Stx6Q9JKK1 255 aa27.38■■□□□ 1.97
Cln6-201ENSMUST00000034776 4933402E13RikQ9D4D2 429 aa27.38■■□□□ 1.97
Cln6-201ENSMUST00000034776 Gm4340L7N2C4 268 aa27.37■■□□□ 1.97
Cln6-201ENSMUST00000034776 Abtb2Q7TQI7 1024 aa27.37■■□□□ 1.97
Cln6-201ENSMUST00000034776 Appbp2Q9DAX9 585 aa27.37■■□□□ 1.97
Cln6-201ENSMUST00000034776 Ppfibp2O35711 882 aa27.37■■□□□ 1.97
Cln6-201ENSMUST00000034776 Isy1Q69ZQ2 285 aaKnown RBP27.37■■□□□ 1.97
Cln6-201ENSMUST00000034776 Lrit1Q8K099 624 aa27.37■■□□□ 1.97
Cln6-201ENSMUST00000034776 Gimap8Q75N62 688 aa27.36■■□□□ 1.97
Cln6-201ENSMUST00000034776 Stox1B2RQL2 990 aa27.35■■□□□ 1.97
Cln6-201ENSMUST00000034776 Atp1b3P97370 278 aa27.35■■□□□ 1.97
Cln6-201ENSMUST00000034776 Edrf1Q6GQV7 1239 aa27.35■■□□□ 1.97
Cln6-201ENSMUST00000034776 Nyap1Q6PFX7 833 aa27.35■■□□□ 1.97
Cln6-201ENSMUST00000034776 Speer4dL7N216 212 aa27.35■■□□□ 1.97
Cln6-201ENSMUST00000034776 Zcrb1Q9CZ96 217 aaKnown RBP27.35■■□□□ 1.97
Cln6-201ENSMUST00000034776 FanccP50652 591 aa27.34■■□□□ 1.97
Cln6-201ENSMUST00000034776 Bms1Q6PGF5 1284 aaKnown RBP27.34■■□□□ 1.97
Cln6-201ENSMUST00000034776 Taok3Q8BYC6 898 aa27.34■■□□□ 1.97
Cln6-201ENSMUST00000034776 Ccdc158Q8CDI6 1109 aa27.34■■□□□ 1.97
Cln6-201ENSMUST00000034776 Usp42B2RQC2 1324 aaKnown RBP27.34■■□□□ 1.97
Cln6-201ENSMUST00000034776 CoblQ5NBX1 1337 aaKnown RBP27.34■■□□□ 1.97
Cln6-201ENSMUST00000034776 CltaO08585 235 aa27.33■■□□□ 1.97
Cln6-201ENSMUST00000034776 Kiaa0753Q6A000 959 aa27.33■■□□□ 1.97
Cln6-201ENSMUST00000034776 Nme8Q715T0 586 aa27.33■■□□□ 1.97
Cln6-201ENSMUST00000034776 Rassf8Q8CJ96 419 aa27.33■■□□□ 1.97
Cln6-201ENSMUST00000034776 Znfx1Q8R151 1909 aaKnown RBP27.33■■□□□ 1.97
Cln6-201ENSMUST00000034776 Gadd45bP22339 160 aa27.32■■□□□ 1.96
Cln6-201ENSMUST00000034776 Hap1O35668 628 aa27.32■■□□□ 1.96
Cln6-201ENSMUST00000034776 Exosc10P56960 887 aaKnown RBP27.32■■□□□ 1.96
Cln6-201ENSMUST00000034776 Tmem143Q8VD26 458 aa27.32■■□□□ 1.96
Cln6-201ENSMUST00000034776 Ccar2Q8VDP4 922 aaKnown RBP27.32■■□□□ 1.96
Cln6-201ENSMUST00000034776 Sik3Q6P4S6 1311 aa27.31■■□□□ 1.96
Cln6-201ENSMUST00000034776 VeztQ3ZK22 780 aa27.31■■□□□ 1.96
Cln6-201ENSMUST00000034776 Ppp1r10Q80W00 888 aaKnown RBP27.31■■□□□ 1.96
Cln6-201ENSMUST00000034776 Atad2Q8CDM1 1040 aa27.31■■□□□ 1.96
Cln6-201ENSMUST00000034776 Emilin1Q99K41 1017 aa27.31■■□□□ 1.96
Cln6-201ENSMUST00000034776 Col3a1P08121 1464 aa27.31■■□□□ 1.96
Cln6-201ENSMUST00000034776 Ube4aE9Q735 1028 aa27.31■■□□□ 1.96
Cln6-201ENSMUST00000034776 Ctdnep1Q3TP92 244 aa27.31■■□□□ 1.96
Cln6-201ENSMUST00000034776 Gm21985Q6P6P5 1106 aa27.31■■□□□ 1.96
Cln6-201ENSMUST00000034776 Slc39a11Q8BWY7 342 aa27.31■■□□□ 1.96
Cln6-201ENSMUST00000034776 Aox1O54754 1333 aa27.3■■□□□ 1.96
Cln6-201ENSMUST00000034776 Scn11aQ9R053 1765 aa27.3■■□□□ 1.96
Cln6-201ENSMUST00000034776 Carmil3Q3UFQ8 1375 aa27.3■■□□□ 1.96
Cln6-201ENSMUST00000034776 Stat1P42225 749 aa27.3■■□□□ 1.96
Cln6-201ENSMUST00000034776 Tmem67Q8BR76 992 aa27.3■■□□□ 1.96
Cln6-201ENSMUST00000034776 Q8BT18 775 aa27.3■■□□□ 1.96
Cln6-201ENSMUST00000034776 Tsr2Q8C8T8 191 aa27.3■■□□□ 1.96
Retrieved 100 of 22,080 RNA–protein pairs in 19.8 ms