RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 LratQ9JI60 231 aa9.91□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Ddb1Q3U1J4 1140 aaKnown RBP9.9□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Nlrp9bQ66X22 1003 aa9.9□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Dmrt2Q8BG36 561 aa9.9□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Snrpa1P57784 255 aaKnown RBP9.9□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Cnnm2Q3TWN3 875 aa9.9□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 ErmnQ5EBJ4 281 aa9.9□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Dhx38Q80X98 1228 aa9.9□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Timm10P62073 90 aa9.9□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Brinp3Q499E0 766 aa9.9□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Leo1Q5XJE5 667 aa9.9□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Zkscan8Q8BSL0 588 aa9.9□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Slx1bQ8BX32 270 aa9.9□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Dnaaf4Q8R368 420 aa9.9□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Ccdc112A0AUP1 442 aa9.9□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Tom1O88746 492 aa9.9□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Mcm3P25206 812 aaKnown RBP9.9□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Cfap157Q0VFX2 523 aa9.9□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Zbtb45Q52KG4 520 aa9.9□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Gigyf1Q99MR1 1044 aaKnown RBP9.9□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Ppil4Q9CXG3 492 aaKnown RBP9.9□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Appbp2Q9DAX9 585 aa9.9□□□□□ -0.82
Sf3b1-201ENSMUST00000027127 Gnat2P50149 354 aa9.9□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Cct2P80314 535 aaKnown RBP9.9□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Gimap8Q75N62 688 aa9.9□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Fbxo3Q9DC63 480 aa9.9□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 F2rP30558 430 aa9.89□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Cdkn1cP49919 348 aa9.89□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Hdac6Q9Z2V5 1149 aa9.89□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Plcb3P51432 1234 aaKnown RBP9.89□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Zc3h12cQ5DTV4 884 aa9.89□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Jarid2Q62315 1234 aa9.89□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Ptcd1Q8C2E4 695 aaKnown RBP9.89□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Camta1A2A891 1682 aa9.89□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Usp25P57080 1055 aa9.89□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Cep63Q3UPP8 700 aa9.89□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Rbm28Q8CGC6 750 aaKnown RBP9.89□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Sos2Q02384 1333 aa9.89□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Cfap73J3QPZ5 306 aa9.89□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Zbtb38Q3LR78 1197 aa9.89□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Itga6Q61739 1091 aa9.89□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Asap2Q7SIG6 958 aa9.89□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Dmrtc1Q9D9R7 182 aa9.89□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Zscan20B2KFW1 1030 aa9.89□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Ftl2P49945 183 aa9.89□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Tnnt2P50752 301 aa9.89□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Cnot6lQ8VEG6 555 aa9.89□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Chd4Q6PDQ2 1915 aaKnown RBP9.88□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Cfap69Q8BH53 942 aa9.88□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 4930504O13RikQ8C5Z9 145 aa9.88□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 NalcnQ8BXR5 1738 aa9.88□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Stx1aO35526 288 aa9.88□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Pcdhb22Q91XZ8 794 aa9.88□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Slc5a4bQ91ZP4 660 aa9.88□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Zbtb43Q9DAI4 467 aa9.88□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Add2Q9QYB8 725 aa9.88□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Adcy5P84309 1262 aa9.88□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 EappQ5BU09 281 aa9.88□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Als2Q920R0 1651 aa9.88□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Metap2O08663 478 aaKnown RBP9.88□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Plbd2Q3TCN2 594 aa9.88□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Esco1Q69Z69 843 aa9.88□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Plcd1Q8R3B1 756 aa9.88□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Zbtb22Q9Z0G7 638 aa9.88□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Nfat5Q9WV30 1534 aa9.88□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 NcapgE9PWG6 1004 aa9.88□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Elmsan1E9Q2I4 1089 aaKnown RBP9.88□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Ampd3O08739 766 aa9.88□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 PrkcshO08795 521 aa9.88□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Nap1l2P51860 460 aa9.88□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Ccp110Q7TSH4 1004 aa9.87□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Dcaf5Q80T85 946 aa9.87□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Ift57Q8BXG3 429 aa9.87□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Rbm17Q8JZX4 405 aaKnown RBP9.87□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Cdca7lQ922M5 438 aa9.87□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Hand2Q61039 217 aa9.87□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 StrbpQ91WM1 672 aaKnown RBP9.87□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Trim11Q99PQ2 467 aa9.87□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 ParvgQ9ERD8 331 aa9.87□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Ubr1O70481 1757 aa9.87□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Adgrb1Q3UHD1 1582 aa9.87□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Ugt1a5B2RT14 529 aa9.87□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Igflr1Q3U4N7 345 aa9.87□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 SetQ9EQU5 289 aaKnown RBP9.87□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Prl3d1P18121 224 aa9.87□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Ubxn10Q8BG34 277 aa9.87□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Ankrd1Q9CR42 319 aa9.87□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Bicdl1A0JNT9 577 aa9.87□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 AK157302I3ITR1 129 aa9.87□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Abtb2Q7TQI7 1024 aa9.87□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 U2af1l4Q8BGJ9 220 aa9.87□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Atad2Q8CDM1 1040 aa9.87□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Pdia6Q922R8 440 aaKnown RBP9.87□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Isca1Q9D924 129 aa9.87□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Lmbr1Q9JIT0 490 aa9.87□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Mast3Q3U214 1321 aa9.86□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 TbcaP48428 108 aaKnown RBP9.86□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Prl7a2O54831 253 aa9.86□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Prpf4bQ61136 1007 aaKnown RBP9.86□□□□□ -0.83
Sf3b1-201ENSMUST00000027127 Nlrp9aQ66X03 949 aa9.86□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 25.3 ms