RNA–Protein interactions for RNA: ENSMUST00000026072.3

Trub1-201, Transcript of Probable tRNA pseudouridine synthase 1, mousemouse

TSL 1 (best) BASIC

Gene Trub1, Length 4,300 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1-201ENSMUST00000026072 Dennd4bQ3U1Y4 1499 aa9.39□□□□□ -0.91
Trub1-201ENSMUST00000026072 Naip7Q9JIB3 1402 aa9.39□□□□□ -0.91
Trub1-201ENSMUST00000026072 Ier5O89113 308 aa9.39□□□□□ -0.91
Trub1-201ENSMUST00000026072 Casp1P29452 402 aa9.39□□□□□ -0.91
Trub1-201ENSMUST00000026072 Vps54Q5SPW0 977 aa9.39□□□□□ -0.91
Trub1-201ENSMUST00000026072 Pdzrn3Q69ZS0 1063 aa9.39□□□□□ -0.91
Trub1-201ENSMUST00000026072 Skor1Q8BX46 964 aa9.39□□□□□ -0.91
Trub1-201ENSMUST00000026072 Frat2Q8K025 231 aa9.39□□□□□ -0.91
Trub1-201ENSMUST00000026072 Ttc5Q99LG4 440 aa9.39□□□□□ -0.91
Trub1-201ENSMUST00000026072 Amotl1Q9D4H4 968 aa9.39□□□□□ -0.91
Trub1-201ENSMUST00000026072 Taf7Q9R1C0 341 aa9.39□□□□□ -0.91
Trub1-201ENSMUST00000026072 Prkab2Q6PAM0 271 aa9.38□□□□□ -0.91
Trub1-201ENSMUST00000026072 Ankrd13dQ6PD24 605 aa9.38□□□□□ -0.91
Trub1-201ENSMUST00000026072 Ppp1r10Q80W00 888 aaKnown RBP9.38□□□□□ -0.91
Trub1-201ENSMUST00000026072 Uba5Q8VE47 403 aa9.38□□□□□ -0.91
Trub1-201ENSMUST00000026072 Smco2Q9DA21 347 aa9.38□□□□□ -0.91
Trub1-201ENSMUST00000026072 Ak2Q9WTP6 239 aa9.38□□□□□ -0.91
Trub1-201ENSMUST00000026072 Ncf1Q09014 390 aa9.38□□□□□ -0.91
Trub1-201ENSMUST00000026072 Ifit2Q64112 472 aa9.38□□□□□ -0.91
Trub1-201ENSMUST00000026072 Pkd2l2Q9JLG4 621 aa9.38□□□□□ -0.91
Trub1-201ENSMUST00000026072 Uchl5Q9WUP7 329 aa9.38□□□□□ -0.91
Trub1-201ENSMUST00000026072 Psmb7P70195 277 aa9.38□□□□□ -0.91
Trub1-201ENSMUST00000026072 MycbpapQ5SUV2 932 aa9.38□□□□□ -0.91
Trub1-201ENSMUST00000026072 Asic1Q6NXK8 526 aa9.38□□□□□ -0.91
Trub1-201ENSMUST00000026072 Naa15Q80UM3 865 aaKnown RBP9.38□□□□□ -0.91
Trub1-201ENSMUST00000026072 Acnat2Q8BGG9 420 aa9.38□□□□□ -0.91
Trub1-201ENSMUST00000026072 Aldh8a1Q8BH00 487 aa9.38□□□□□ -0.91
Trub1-201ENSMUST00000026072 Capn12Q9ER56 720 aa9.38□□□□□ -0.91
Trub1-201ENSMUST00000026072 Myo1bP46735 1107 aa9.37□□□□□ -0.91
Trub1-201ENSMUST00000026072 Cfap157Q0VFX2 523 aa9.37□□□□□ -0.91
Trub1-201ENSMUST00000026072 Nsrp1Q5NCR9 542 aa9.37□□□□□ -0.91
Trub1-201ENSMUST00000026072 Cdca8Q8BHX3 289 aa9.37□□□□□ -0.91
Trub1-201ENSMUST00000026072 Iffo1Q8BXL9 562 aa9.37□□□□□ -0.91
Trub1-201ENSMUST00000026072 Myl6bQ8CI43 207 aa9.37□□□□□ -0.91
Trub1-201ENSMUST00000026072 Erlin1Q91X78 346 aa9.37□□□□□ -0.91
Trub1-201ENSMUST00000026072 Fam213aQ9CYH2 218 aa9.37□□□□□ -0.91
Trub1-201ENSMUST00000026072 Acot9Q9R0X4 439 aaKnown RBP9.37□□□□□ -0.91
Trub1-201ENSMUST00000026072 Akap2O54931 893 aa9.37□□□□□ -0.91
Trub1-201ENSMUST00000026072 Hoxb7P09024 217 aa9.37□□□□□ -0.91
Trub1-201ENSMUST00000026072 IntuQ059U7 942 aa9.37□□□□□ -0.91
Trub1-201ENSMUST00000026072 Ift88Q61371 824 aa9.37□□□□□ -0.91
Trub1-201ENSMUST00000026072 Rbm17Q8JZX4 405 aaKnown RBP9.37□□□□□ -0.91
Trub1-201ENSMUST00000026072 Exoc1Q8R3S6 894 aa9.37□□□□□ -0.91
Trub1-201ENSMUST00000026072 Cnpy2Q9QXT0 182 aa9.37□□□□□ -0.91
Trub1-201ENSMUST00000026072 NpcdF8VQB8 469 aa9.37□□□□□ -0.91
Trub1-201ENSMUST00000026072 Tekt3Q6X6Z7 490 aa9.37□□□□□ -0.91
Trub1-201ENSMUST00000026072 MthfsQ9D110 203 aa9.37□□□□□ -0.91
Trub1-201ENSMUST00000026072 Cfap53Q9D439 514 aa9.37□□□□□ -0.91
Trub1-201ENSMUST00000026072 Il4rP16382 810 aa9.37□□□□□ -0.91
Trub1-201ENSMUST00000026072 Zkscan4Q5SZT6 480 aa9.37□□□□□ -0.91
Trub1-201ENSMUST00000026072 Tbc1d5Q80XQ2 815 aa9.37□□□□□ -0.91
Trub1-201ENSMUST00000026072 Lrrc2Q8VDB8 371 aa9.37□□□□□ -0.91
Trub1-201ENSMUST00000026072 Zkscan16A2ALW2 728 aa9.36□□□□□ -0.91
Trub1-201ENSMUST00000026072 Ppfibp1Q8C8U0 969 aaKnown RBP9.36□□□□□ -0.91
Trub1-201ENSMUST00000026072 Edc3Q8K2D3 508 aaKnown RBP9.36□□□□□ -0.91
Trub1-201ENSMUST00000026072 Mlh1Q9JK91 760 aa9.36□□□□□ -0.91
Trub1-201ENSMUST00000026072 Map3k19E9Q3S4 1311 aa9.36□□□□□ -0.91
Trub1-201ENSMUST00000026072 Rusc2Q80U22 1514 aa9.36□□□□□ -0.91
Trub1-201ENSMUST00000026072 IqcgQ80W32 419 aa9.36□□□□□ -0.91
Trub1-201ENSMUST00000026072 Smc1aQ9CU62 1233 aaKnown RBP9.36□□□□□ -0.91
Trub1-201ENSMUST00000026072 Gm16486A0A1D5RMD1 1434 aa9.36□□□□□ -0.91
Trub1-201ENSMUST00000026072 Fam186bD3Z420 943 aa9.36□□□□□ -0.91
Trub1-201ENSMUST00000026072 Eme2Q56A04 373 aa9.36□□□□□ -0.91
Trub1-201ENSMUST00000026072 Cavin2Q63918 418 aaKnown RBP9.36□□□□□ -0.91
Trub1-201ENSMUST00000026072 Nek11Q8C0Q4 628 aa9.36□□□□□ -0.91
Trub1-201ENSMUST00000026072 Calml4Q91WQ9 153 aa9.36□□□□□ -0.91
Trub1-201ENSMUST00000026072 Lonrf3Q9D4H7 753 aa9.36□□□□□ -0.91
Trub1-201ENSMUST00000026072 Hs6st3Q9QYK4 470 aa9.36□□□□□ -0.91
Trub1-201ENSMUST00000026072 Supt6hQ62383 1726 aaKnown RBP9.35□□□□□ -0.91
Trub1-201ENSMUST00000026072 Myl10Q62082 202 aa9.35□□□□□ -0.91
Trub1-201ENSMUST00000026072 Pdcl2Q78Y63 240 aa9.35□□□□□ -0.91
Trub1-201ENSMUST00000026072 GlmnQ8BZM1 596 aa9.35□□□□□ -0.91
Trub1-201ENSMUST00000026072 Rufy3Q9D394 469 aa9.35□□□□□ -0.91
Trub1-201ENSMUST00000026072 Krt15Q61414 452 aa9.35□□□□□ -0.91
Trub1-201ENSMUST00000026072 Ccdc148Q6P5U8 527 aa9.35□□□□□ -0.91
Trub1-201ENSMUST00000026072 PicalmQ7M6Y3 660 aaKnown RBP9.35□□□□□ -0.91
Trub1-201ENSMUST00000026072 ClasrpQ8CFC7 668 aa9.35□□□□□ -0.91
Trub1-201ENSMUST00000026072 Krt79Q8VED5 531 aa9.35□□□□□ -0.91
Trub1-201ENSMUST00000026072 CpvlQ9D3S9 478 aa9.35□□□□□ -0.91
Trub1-201ENSMUST00000026072 Kdm3aQ6PCM1 1323 aa9.35□□□□□ -0.91
Trub1-201ENSMUST00000026072 Ankrd50F7BE84 1390 aa9.35□□□□□ -0.91
Trub1-201ENSMUST00000026072 Gli2Q0VGT2 1544 aa9.35□□□□□ -0.91
Trub1-201ENSMUST00000026072 Gcc2Q8CHG3 1679 aa9.35□□□□□ -0.91
Trub1-201ENSMUST00000026072 Tpx2A2APB8 745 aaKnown RBP9.35□□□□□ -0.91
Trub1-201ENSMUST00000026072 Wdr70Q3TWF6 657 aa9.35□□□□□ -0.91
Trub1-201ENSMUST00000026072 Prdm1Q60636 856 aa9.35□□□□□ -0.91
Trub1-201ENSMUST00000026072 CtcfQ61164 736 aaKnown RBP9.35□□□□□ -0.91
Trub1-201ENSMUST00000026072 Hsf2bpQ9D4G2 338 aa9.35□□□□□ -0.91
Trub1-201ENSMUST00000026072 Atp12aQ9Z1W8 1035 aa9.35□□□□□ -0.91
Trub1-201ENSMUST00000026072 Cfap74Q3UY96 1578 aa9.35□□□□□ -0.91
Trub1-201ENSMUST00000026072 PalldQ9ET54 1408 aa9.35□□□□□ -0.91
Trub1-201ENSMUST00000026072 Gm30191A0A0U1RNT7 187 aa9.35□□□□□ -0.91
Trub1-201ENSMUST00000026072 Pex1Q5BL07 1284 aa9.35□□□□□ -0.91
Trub1-201ENSMUST00000026072 9230110C19RikQ8CC70 267 aa9.35□□□□□ -0.91
Trub1-201ENSMUST00000026072 4921504E06RikQ8CET2 560 aa9.35□□□□□ -0.91
Trub1-201ENSMUST00000026072 Rtn1Q8K0T0 780 aa9.35□□□□□ -0.91
Trub1-201ENSMUST00000026072 Brd3Q8K2F0 726 aaKnown RBP9.35□□□□□ -0.91
Trub1-201ENSMUST00000026072 Rapgef3Q8VCC8 918 aa9.35□□□□□ -0.91
Trub1-201ENSMUST00000026072 Fam76aQ922G2 307 aa9.35□□□□□ -0.91
Trub1-201ENSMUST00000026072 Rdm1Q9CQK3 281 aa9.35□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 25.1 ms