RNA–Protein interactions for RNA: ENST00000638883.1

NECAP1-213, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,940 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-213ENST00000638883 C16orf54Q6UWD8 224 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 UBE2R2Q712K3 238 aaPredicted RBP6.5□□□□□ -1.37
NECAP1-213ENST00000638883 UBE3DQ7Z6J8 389 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 TSEN54Q7Z6J9 526 aaKnown RBP6.5□□□□□ -1.37
NECAP1-213ENST00000638883 DEFB123Q8N688 67 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 TEX26Q8N6G2 289 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 HSD17B11Q8NBQ5 300 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 DNAJA3Q96EY1 480 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 SNX22Q96L94 193 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 MRGPRX4Q96LA9 322 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 SNHG12Q9BXW3 62 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 EPHX3Q9H6B9 360 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 ASB8Q9H765 288 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 SERINC1Q9NRX5 453 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 FBXO4Q9UKT5 387 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 SMIM35A0A1B0GVV1 85 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 K7EPK0 472 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 PEX12O00623 359 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 BHLHE40O14503 412 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 CLDN11O75508 207 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 PAPLNO95428 1278 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 CYB5R3P00387 301 aaPredicted RBP6.5□□□□□ -1.37
NECAP1-213ENST00000638883 RAB40ALP0C0E4 278 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 ALPPL2P10696 532 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 AKR1C4P17516 323 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 CDK2P24941 298 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 OR1E1P30953 314 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 PRSS3P35030 304 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 MANFP55145 182 aaKnown RBP6.5□□□□□ -1.37
NECAP1-213ENST00000638883 EIF4EBP2Q13542 120 aaPredicted RBP6.5□□□□□ -1.37
NECAP1-213ENST00000638883 NKPD1Q17RQ9 610 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 FRRS1Q6ZNA5 592 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 LRP11Q86VZ4 500 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 TMPRSS12Q86WS5 348 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 FAM71E2Q8N5Q1 922 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 OR5T1Q8NG75 326 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 M1APQ8TC57 530 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 RAB40AQ8WXH6 277 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 MR1Q95460 341 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 RAB39BQ96DA2 213 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 FUBP3Q96I24 572 aaKnown RBP eCLIP6.5□□□□□ -1.37
NECAP1-213ENST00000638883 FAM46AQ96IP4 442 aaKnown RBP6.5□□□□□ -1.37
NECAP1-213ENST00000638883 WDR92Q96MX6 357 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 URM1Q9BTM9 101 aaKnown RBP6.5□□□□□ -1.37
NECAP1-213ENST00000638883 EGLN1Q9GZT9 426 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 CHST6Q9GZX3 395 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 SMG9Q9H0W8 520 aaKnown RBP6.5□□□□□ -1.37
NECAP1-213ENST00000638883 SGK2Q9HBY8 427 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 SPG21Q9NZD8 308 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 SUSD2Q9UGT4 822 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 ARID1BQ8NFD5 2236 aaPredicted RBP6.5□□□□□ -1.37
NECAP1-213ENST00000638883 CTDSPLO15194 276 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 ZIC2O95409 532 aaPredicted RBP6.5□□□□□ -1.37
NECAP1-213ENST00000638883 TRGC2P03986 189 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 IFNA6P05013 189 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 ASGR1P07306 291 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 GALP22466 123 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 FXYD6P3P58550 94 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 TCTN3Q6NUS6 607 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 FAM151BQ6UXP7 276 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 ZNF627Q7L945 461 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 GID4Q8IVV7 300 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 GALNT16Q8N428 558 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 ZBTB2Q8N680 514 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 TOP6BLQ8N6T0 577 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 SLC30A7Q8NEW0 376 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 OR13C2Q8NGS9 318 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 OR5K2Q8NHB8 316 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 ROBO4Q8WZ75 1007 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 THRSPQ92748 146 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 SAT2Q96F10 170 aaPredicted RBP6.5□□□□□ -1.37
NECAP1-213ENST00000638883 PIK3IP1Q96FE7 263 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 TAAR9Q96RI9 348 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 DPEP2Q9H4A9 486 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 TAF9BQ9HBM6 251 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 OSER1Q9NX31 292 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 AMDHD2Q9Y303 409 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 STARD10Q9Y365 291 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 OARD1Q9Y530 152 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 RBM7Q9Y580 266 aaKnown RBP6.5□□□□□ -1.37
NECAP1-213ENST00000638883 SPTA1P02549 2419 aa6.5□□□□□ -1.37
NECAP1-213ENST00000638883 TCRBV21S2A2A0A5A6 115 aa6.49□□□□□ -1.37
NECAP1-213ENST00000638883 ANKUB1A6NFN9 424 aa6.49□□□□□ -1.37
NECAP1-213ENST00000638883 ZNF821O75541 412 aaPredicted RBP6.49□□□□□ -1.37
NECAP1-213ENST00000638883 CYB5AP00167 134 aa6.49□□□□□ -1.37
NECAP1-213ENST00000638883 ELFN1P0C7U0 828 aa6.49□□□□□ -1.37
NECAP1-213ENST00000638883 PSMB6P28072 239 aa6.49□□□□□ -1.37
NECAP1-213ENST00000638883 THBS4P35443 961 aa6.49□□□□□ -1.37
NECAP1-213ENST00000638883 SOX2P48431 317 aa6.49□□□□□ -1.37
NECAP1-213ENST00000638883 EOGTQ5NDL2 527 aa6.49□□□□□ -1.37
NECAP1-213ENST00000638883 C1orf185Q5T7R7 199 aa6.49□□□□□ -1.37
NECAP1-213ENST00000638883 RIPPLY2Q5TAB7 128 aa6.49□□□□□ -1.37
NECAP1-213ENST00000638883 STEAP1BQ6NZ63 245 aa6.49□□□□□ -1.37
NECAP1-213ENST00000638883 SBSNQ6UWP8 590 aa6.49□□□□□ -1.37
NECAP1-213ENST00000638883 ZNF664Q8N3J9 261 aa6.49□□□□□ -1.37
NECAP1-213ENST00000638883 BBS1Q8NFJ9 593 aa6.49□□□□□ -1.37
NECAP1-213ENST00000638883 OR2T33Q8NG76 320 aa6.49□□□□□ -1.37
NECAP1-213ENST00000638883 MITD1Q8WV92 249 aa6.49□□□□□ -1.37
NECAP1-213ENST00000638883 P2RY12Q9H244 342 aa6.49□□□□□ -1.37
NECAP1-213ENST00000638883 ELOVL2Q9NXB9 296 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms