RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 SLC22A24Q8N4F4 322 aa12.24□□□□□ -0.45
RPAIN-217ENST00000575711 WDR31Q8NA23 367 aa12.24□□□□□ -0.45
RPAIN-217ENST00000575711 CYB561A3Q8NBI2 242 aa12.24□□□□□ -0.45
RPAIN-217ENST00000575711 OR2T4Q8NH00 348 aa12.24□□□□□ -0.45
RPAIN-217ENST00000575711 TSSK2Q96PF2 358 aa12.24□□□□□ -0.45
RPAIN-217ENST00000575711 DDOQ99489 341 aa12.24□□□□□ -0.45
RPAIN-217ENST00000575711 COL12A1Q99715 3063 aa12.24□□□□□ -0.45
RPAIN-217ENST00000575711 FN3KQ9H479 309 aa12.24□□□□□ -0.45
RPAIN-217ENST00000575711 SRA1Q9HD15 236 aaKnown RBP12.24□□□□□ -0.45
RPAIN-217ENST00000575711 NGBQ9NPG2 151 aa12.24□□□□□ -0.45
RPAIN-217ENST00000575711 TVP23BQ9NYZ1 205 aa12.24□□□□□ -0.45
RPAIN-217ENST00000575711 RRP15Q9Y3B9 282 aaKnown RBP12.24□□□□□ -0.45
RPAIN-217ENST00000575711 SLC25A15Q9Y619 301 aa12.24□□□□□ -0.45
RPAIN-217ENST00000575711 FKBP7Q9Y680 259 aa12.24□□□□□ -0.45
RPAIN-217ENST00000575711 CASQ2O14958 399 aaPredicted RBP12.23□□□□□ -0.45
RPAIN-217ENST00000575711 CRYGSP22914 178 aa12.23□□□□□ -0.45
RPAIN-217ENST00000575711 LAP3P28838 519 aa12.23□□□□□ -0.45
RPAIN-217ENST00000575711 EPHA2P29317 976 aa12.23□□□□□ -0.45
RPAIN-217ENST00000575711 POLR2IP36954 125 aaKnown RBP12.23□□□□□ -0.45
RPAIN-217ENST00000575711 CENPAP49450 140 aa12.23□□□□□ -0.45
RPAIN-217ENST00000575711 SLC25A1P53007 311 aa12.23□□□□□ -0.45
RPAIN-217ENST00000575711 SGCAQ16586 387 aa12.23□□□□□ -0.45
RPAIN-217ENST00000575711 ZIK1Q3SY52 487 aaPredicted RBP12.23□□□□□ -0.45
RPAIN-217ENST00000575711 SLX4IPQ5VYV7 408 aa12.23□□□□□ -0.45
RPAIN-217ENST00000575711 FOXL2NBQ6ZUU3 175 aa12.23□□□□□ -0.45
RPAIN-217ENST00000575711 ZBTB46Q86UZ6 589 aa12.23□□□□□ -0.45
RPAIN-217ENST00000575711 GLB1L2Q8IW92 636 aa12.23□□□□□ -0.45
RPAIN-217ENST00000575711 GALNT4Q8N4A0 578 aa12.23□□□□□ -0.45
RPAIN-217ENST00000575711 PACRGLQ8N7B6 248 aa12.23□□□□□ -0.45
RPAIN-217ENST00000575711 OTULINQ96BN8 352 aa12.23□□□□□ -0.45
RPAIN-217ENST00000575711 RACGAP1Q9H0H5 632 aa12.23□□□□□ -0.45
RPAIN-217ENST00000575711 KCNN2Q9H2S1 579 aa12.23□□□□□ -0.45
RPAIN-217ENST00000575711 SIAEQ9HAT2 523 aa12.23□□□□□ -0.45
RPAIN-217ENST00000575711 MOV10Q9HCE1 1003 aaKnown RBP12.23□□□□□ -0.45
RPAIN-217ENST00000575711 NKX1-2Q9UD57 310 aaPredicted RBP12.23□□□□□ -0.45
RPAIN-217ENST00000575711 B9D1Q9UPM9 204 aa12.23□□□□□ -0.45
RPAIN-217ENST00000575711 COA3Q9Y2R0 106 aaPredicted RBP12.23□□□□□ -0.45
RPAIN-217ENST00000575711 ADGRG4Q8IZF6 3080 aa12.22□□□□□ -0.45
RPAIN-217ENST00000575711 IGLV1-36A0A0B4J1U3 117 aa12.22□□□□□ -0.45
RPAIN-217ENST00000575711 PRR23D1E9PI22 279 aaPredicted RBP12.22□□□□□ -0.45
RPAIN-217ENST00000575711 DCTN6O00399 190 aa12.22□□□□□ -0.45
RPAIN-217ENST00000575711 UBL3O95164 117 aa12.22□□□□□ -0.45
RPAIN-217ENST00000575711 PRR23D2P0DMB1 279 aaPredicted RBP12.22□□□□□ -0.45
RPAIN-217ENST00000575711 CD79AP11912 226 aa12.22□□□□□ -0.45
RPAIN-217ENST00000575711 MSR1P21757 451 aa12.22□□□□□ -0.45
RPAIN-217ENST00000575711 TUBA1BP68363 451 aa12.22□□□□□ -0.45
RPAIN-217ENST00000575711 TUBA4AP68366 448 aa12.22□□□□□ -0.45
RPAIN-217ENST00000575711 GLO1Q04760 184 aa12.22□□□□□ -0.45
RPAIN-217ENST00000575711 RIPK1Q13546 671 aa12.22□□□□□ -0.45
RPAIN-217ENST00000575711 OGFRL1Q5TC84 451 aaPredicted RBP12.22□□□□□ -0.45
RPAIN-217ENST00000575711 C12orf73Q69YU5 71 aa12.22□□□□□ -0.45
RPAIN-217ENST00000575711 TUBA1AQ71U36 451 aa12.22□□□□□ -0.45
RPAIN-217ENST00000575711 SLC16A14Q7RTX9 510 aa12.22□□□□□ -0.45
RPAIN-217ENST00000575711 DPPA2Q7Z7J5 298 aa12.22□□□□□ -0.45
RPAIN-217ENST00000575711 SKA3Q8IX90 412 aa12.22□□□□□ -0.45
RPAIN-217ENST00000575711 LRRC18Q8N456 261 aa12.22□□□□□ -0.45
RPAIN-217ENST00000575711 PROKR2Q8NFJ6 384 aa12.22□□□□□ -0.45
RPAIN-217ENST00000575711 OR9Q1Q8NGQ5 310 aa12.22□□□□□ -0.45
RPAIN-217ENST00000575711 HTRA1Q92743 480 aa12.22□□□□□ -0.45
RPAIN-217ENST00000575711 NABP1Q96AH0 204 aa12.22□□□□□ -0.45
RPAIN-217ENST00000575711 RDH12Q96NR8 316 aa12.22□□□□□ -0.45
RPAIN-217ENST00000575711 FOXN4Q96NZ1 517 aa12.22□□□□□ -0.45
RPAIN-217ENST00000575711 SH3GL3Q99963 347 aa12.22□□□□□ -0.45
RPAIN-217ENST00000575711 VCXQ9H320 206 aa12.22□□□□□ -0.45
RPAIN-217ENST00000575711 TOR3AQ9H497 397 aa12.22□□□□□ -0.45
RPAIN-217ENST00000575711 POLE4Q9NR33 117 aa12.22□□□□□ -0.45
RPAIN-217ENST00000575711 SMPD3Q9NY59 655 aaPredicted RBP12.22□□□□□ -0.45
RPAIN-217ENST00000575711 ALPK2Q86TB3 2170 aa12.22□□□□□ -0.45
RPAIN-217ENST00000575711 DOPEY2Q9Y3R5 2298 aa12.21□□□□□ -0.45
RPAIN-217ENST00000575711 FAM183AA6NL82 134 aa12.21□□□□□ -0.45
RPAIN-217ENST00000575711 FAM171A2A8MVW0 826 aa12.21□□□□□ -0.45
RPAIN-217ENST00000575711 GOSR1O95249 250 aa12.21□□□□□ -0.45
RPAIN-217ENST00000575711 SNAP29O95721 258 aa12.21□□□□□ -0.45
RPAIN-217ENST00000575711 HLA-HP01893 362 aa12.21□□□□□ -0.45
RPAIN-217ENST00000575711 HLA-DQA2P01906 255 aa12.21□□□□□ -0.45
RPAIN-217ENST00000575711 SPI1P17947 270 aa12.21□□□□□ -0.45
RPAIN-217ENST00000575711 PYCR1P32322 319 aa12.21□□□□□ -0.45
RPAIN-217ENST00000575711 CDC42P60953 191 aa12.21□□□□□ -0.45
RPAIN-217ENST00000575711 DAZAP2Q15038 168 aaPredicted RBP12.21□□□□□ -0.45
RPAIN-217ENST00000575711 GSG1Q2KHT4 349 aa12.21□□□□□ -0.45
RPAIN-217ENST00000575711 SLC36A2Q495M3 483 aa12.21□□□□□ -0.45
RPAIN-217ENST00000575711 BEX5Q5H9J7 111 aa12.21□□□□□ -0.45
RPAIN-217ENST00000575711 FAM27BQ5VT28 67 aa12.21□□□□□ -0.45
RPAIN-217ENST00000575711 HIST2H2BCQ6DN03 193 aa12.21□□□□□ -0.45
RPAIN-217ENST00000575711 PLBD1Q6P4A8 553 aa12.21□□□□□ -0.45
RPAIN-217ENST00000575711 MBOAT4Q96T53 435 aa12.21□□□□□ -0.45
RPAIN-217ENST00000575711 C1QTNF6Q9BXI9 259 aa12.21□□□□□ -0.45
RPAIN-217ENST00000575711 NMNAT2Q9BZQ4 307 aa12.21□□□□□ -0.45
RPAIN-217ENST00000575711 GRIP2Q9C0E4 1043 aa12.21□□□□□ -0.45
RPAIN-217ENST00000575711 RNF121Q9H920 327 aa12.21□□□□□ -0.45
RPAIN-217ENST00000575711 ICE1Q9Y2F5 2266 aa12.2□□□□□ -0.46
RPAIN-217ENST00000575711 A6NNC1 897 aa12.2□□□□□ -0.46
RPAIN-217ENST00000575711 M0R1B8 84 aa12.2□□□□□ -0.46
RPAIN-217ENST00000575711 PRKYO43930 277 aa12.2□□□□□ -0.46
RPAIN-217ENST00000575711 ATP6V1G2O95670 118 aa12.2□□□□□ -0.46
RPAIN-217ENST00000575711 RAB36O95755 333 aa12.2□□□□□ -0.46
RPAIN-217ENST00000575711 GYPBP06028 91 aa12.2□□□□□ -0.46
RPAIN-217ENST00000575711 CST2P09228 141 aa12.2□□□□□ -0.46
RPAIN-217ENST00000575711 GAAP10253 952 aa12.2□□□□□ -0.46
RPAIN-217ENST00000575711 CLUP10909 449 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms