RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 SNX18Q96RF0 628 aa16.02■□□□□ 0.16
CPSF2-202ENST00000553427 SH3GL3Q99963 347 aa16.02■□□□□ 0.16
CPSF2-202ENST00000553427 DGCR6LQ9BY27 220 aa16.02■□□□□ 0.16
CPSF2-202ENST00000553427 SEC61A2Q9H9S3 476 aa16.02■□□□□ 0.16
CPSF2-202ENST00000553427 LAMP3Q9UQV4 416 aa16.02■□□□□ 0.16
CPSF2-202ENST00000553427 ATP23Q9Y6H3 246 aa16.02■□□□□ 0.16
CPSF2-202ENST00000553427 VPS13CQ709C8 3753 aa16.02■□□□□ 0.15
CPSF2-202ENST00000553427 IDH3BO43837 385 aa16.01■□□□□ 0.15
CPSF2-202ENST00000553427 CST1P01037 141 aa16.01■□□□□ 0.15
CPSF2-202ENST00000553427 MMP7P09237 267 aaPredicted RBP16.01■□□□□ 0.15
CPSF2-202ENST00000553427 CALCRP30988 508 aa16.01■□□□□ 0.15
CPSF2-202ENST00000553427 GIPRP48546 466 aa16.01■□□□□ 0.15
CPSF2-202ENST00000553427 PTDSS1P48651 473 aaKnown RBP16.01■□□□□ 0.15
CPSF2-202ENST00000553427 NPRL3Q12980 569 aa16.01■□□□□ 0.15
CPSF2-202ENST00000553427 FAM27BQ5VT28 67 aa16.01■□□□□ 0.15
CPSF2-202ENST00000553427 AGAP6Q5VW22 663 aa16.01■□□□□ 0.15
CPSF2-202ENST00000553427 TMEM53Q6P2H8 277 aa16.01■□□□□ 0.15
CPSF2-202ENST00000553427 RASSF6Q6ZTQ3 369 aa16.01■□□□□ 0.15
CPSF2-202ENST00000553427 SLC16A14Q7RTX9 510 aa16.01■□□□□ 0.15
CPSF2-202ENST00000553427 AQP11Q8NBQ7 271 aa16.01■□□□□ 0.15
CPSF2-202ENST00000553427 FGFBP3Q8TAT2 258 aa16.01■□□□□ 0.15
CPSF2-202ENST00000553427 NSMAFQ92636 917 aa16.01■□□□□ 0.15
CPSF2-202ENST00000553427 C1orf198Q9H425 327 aa16.01■□□□□ 0.15
CPSF2-202ENST00000553427 IL20Q9NYY1 176 aa16.01■□□□□ 0.15
CPSF2-202ENST00000553427 IL20RAQ9UHF4 553 aa16.01■□□□□ 0.15
CPSF2-202ENST00000553427 IER3IP1Q9Y5U9 82 aa16.01■□□□□ 0.15
CPSF2-202ENST00000553427 F8P00451 2351 aa16■□□□□ 0.15
CPSF2-202ENST00000553427 ARID1AO14497 2285 aa16■□□□□ 0.15
CPSF2-202ENST00000553427 H7C1C5 153 aa16■□□□□ 0.15
CPSF2-202ENST00000553427 FKBP6O75344 327 aa16■□□□□ 0.15
CPSF2-202ENST00000553427 PPP1R3DO95685 299 aa16■□□□□ 0.15
CPSF2-202ENST00000553427 GASTP01350 101 aa16■□□□□ 0.15
CPSF2-202ENST00000553427 CD8AP01732 235 aa16■□□□□ 0.15
CPSF2-202ENST00000553427 SERPINA5P05154 406 aa16■□□□□ 0.15
CPSF2-202ENST00000553427 GSTM3P21266 225 aa16■□□□□ 0.15
CPSF2-202ENST00000553427 APOBEC3AP31941 199 aaPredicted RBP16■□□□□ 0.15
CPSF2-202ENST00000553427 PTH2RP49190 550 aa16■□□□□ 0.15
CPSF2-202ENST00000553427 LCN6P62502 163 aa16■□□□□ 0.15
CPSF2-202ENST00000553427 PIGFQ07326 219 aa16■□□□□ 0.15
CPSF2-202ENST00000553427 SHEQ5VZ18 495 aa16■□□□□ 0.15
CPSF2-202ENST00000553427 C11orf71Q6IPW1 123 aa16■□□□□ 0.15
CPSF2-202ENST00000553427 PRSS57Q6UWY2 283 aa16■□□□□ 0.15
CPSF2-202ENST00000553427 CD300LDQ6UXZ3 194 aa16■□□□□ 0.15
CPSF2-202ENST00000553427 ASRGL1Q7L266 308 aa16■□□□□ 0.15
CPSF2-202ENST00000553427 KRTAP1-3Q8IUG1 177 aa16■□□□□ 0.15
CPSF2-202ENST00000553427 FBXL14Q8N1E6 418 aa16■□□□□ 0.15
CPSF2-202ENST00000553427 SAMD8Q96LT4 415 aa16■□□□□ 0.15
CPSF2-202ENST00000553427 WACQ9BTA9 647 aa16■□□□□ 0.15
CPSF2-202ENST00000553427 ZNF442Q9H7R0 627 aa16■□□□□ 0.15
CPSF2-202ENST00000553427 CA10Q9NS85 328 aa16■□□□□ 0.15
CPSF2-202ENST00000553427 CBLN4Q9NTU7 201 aa16■□□□□ 0.15
CPSF2-202ENST00000553427 U3KQV3 271 aa16■□□□□ 0.15
CPSF2-202ENST00000553427 HEATR1Q9H583 2144 aaKnown RBP16■□□□□ 0.15
CPSF2-202ENST00000553427 SOCS2O14508 198 aa15.99■□□□□ 0.15
CPSF2-202ENST00000553427 CST2P09228 141 aa15.99■□□□□ 0.15
CPSF2-202ENST00000553427 PATE4P0C8F1 98 aa15.99■□□□□ 0.15
CPSF2-202ENST00000553427 ZNF35P13682 527 aa15.99■□□□□ 0.15
CPSF2-202ENST00000553427 CDAP32320 146 aa15.99■□□□□ 0.15
CPSF2-202ENST00000553427 GUCA1AP43080 201 aaPredicted RBP15.99■□□□□ 0.15
CPSF2-202ENST00000553427 FABP6P51161 128 aa15.99■□□□□ 0.15
CPSF2-202ENST00000553427 NKX6-1P78426 367 aaPredicted RBP15.99■□□□□ 0.15
CPSF2-202ENST00000553427 CBX1P83916 185 aa15.99■□□□□ 0.15
CPSF2-202ENST00000553427 HGFACQ04756 655 aa15.99■□□□□ 0.15
CPSF2-202ENST00000553427 PTCHD4Q6ZW05 846 aa15.99■□□□□ 0.15
CPSF2-202ENST00000553427 ZNF584Q8IVC4 421 aa15.99■□□□□ 0.15
CPSF2-202ENST00000553427 MUC15Q8N387 334 aa15.99■□□□□ 0.15
CPSF2-202ENST00000553427 OR10G2Q8NGC3 310 aa15.99■□□□□ 0.15
CPSF2-202ENST00000553427 OR52L1Q8NGH7 329 aa15.99■□□□□ 0.15
CPSF2-202ENST00000553427 HTRA1Q92743 480 aa15.99■□□□□ 0.15
CPSF2-202ENST00000553427 SLCO4A1Q96BD0 722 aa15.99■□□□□ 0.15
CPSF2-202ENST00000553427 MS4A3Q96HJ5 214 aa15.99■□□□□ 0.15
CPSF2-202ENST00000553427 ERMAPQ96PL5 475 aaPredicted RBP15.99■□□□□ 0.15
CPSF2-202ENST00000553427 IFT27Q9BW83 186 aa15.99■□□□□ 0.15
CPSF2-202ENST00000553427 SYT4Q9H2B2 425 aa15.99■□□□□ 0.15
CPSF2-202ENST00000553427 KCNN2Q9H2S1 579 aa15.99■□□□□ 0.15
CPSF2-202ENST00000553427 DNAJB9Q9UBS3 223 aa15.99■□□□□ 0.15
CPSF2-202ENST00000553427 USF3Q68DE3 2245 aa15.98■□□□□ 0.15
CPSF2-202ENST00000553427 PTHP01270 115 aa15.98■□□□□ 0.15
CPSF2-202ENST00000553427 CTLA4P16410 223 aa15.98■□□□□ 0.15
CPSF2-202ENST00000553427 MSR1P21757 451 aa15.98■□□□□ 0.15
CPSF2-202ENST00000553427 CDKN2AP42771 156 aaKnown RBP15.98■□□□□ 0.15
CPSF2-202ENST00000553427 COX10Q12887 443 aa15.98■□□□□ 0.15
CPSF2-202ENST00000553427 PPP1R8Q12972 351 aaKnown RBP15.98■□□□□ 0.15
CPSF2-202ENST00000553427 RAB39AQ14964 217 aa15.98■□□□□ 0.15
CPSF2-202ENST00000553427 CCDC121Q6ZUS5 278 aa15.98■□□□□ 0.15
CPSF2-202ENST00000553427 SYT9Q86SS6 491 aa15.98■□□□□ 0.15
CPSF2-202ENST00000553427 GIPC3Q8TF64 312 aa15.98■□□□□ 0.15
CPSF2-202ENST00000553427 POLE4Q9NR33 117 aa15.98■□□□□ 0.15
CPSF2-202ENST00000553427 BHLHE40O14503 412 aa15.97■□□□□ 0.15
CPSF2-202ENST00000553427 KHDRBS3O75525 346 aaKnown RBP15.97■□□□□ 0.15
CPSF2-202ENST00000553427 SNAP29O95721 258 aa15.97■□□□□ 0.15
CPSF2-202ENST00000553427 CRABP1P29762 137 aa15.97■□□□□ 0.15
CPSF2-202ENST00000553427 PCBD1P61457 104 aa15.97■□□□□ 0.15
CPSF2-202ENST00000553427 ADAM8P78325 824 aa15.97■□□□□ 0.15
CPSF2-202ENST00000553427 EFNB3Q15768 340 aa15.97■□□□□ 0.15
CPSF2-202ENST00000553427 SGCAQ16586 387 aa15.97■□□□□ 0.15
CPSF2-202ENST00000553427 C1orf146Q5VVC0 180 aa15.97■□□□□ 0.15
CPSF2-202ENST00000553427 DNM1P34Q6PK57 102 aa15.97■□□□□ 0.15
CPSF2-202ENST00000553427 TGIF2LYQ8IUE0 185 aa15.97■□□□□ 0.15
CPSF2-202ENST00000553427 LRRC18Q8N456 261 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms