RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 ZAR1Q86SH2 424 aa11.01□□□□□ -0.65
VDR-208ENST00000550325 PPP1R14AQ96A00 147 aa11.01□□□□□ -0.65
VDR-208ENST00000550325 CST11Q9H112 138 aa11.01□□□□□ -0.65
VDR-208ENST00000550325 MKKSQ9NPJ1 570 aaPredicted RBP11.01□□□□□ -0.65
VDR-208ENST00000550325 HAO2Q9NYQ3 351 aa11.01□□□□□ -0.65
VDR-208ENST00000550325 APOBEC3BQ9UH17 382 aaKnown RBP11.01□□□□□ -0.65
VDR-208ENST00000550325 KCNE5Q9UJ90 142 aa11.01□□□□□ -0.65
VDR-208ENST00000550325 IGKV1-8A0A0C4DH67 115 aa11.01□□□□□ -0.65
VDR-208ENST00000550325 ITGA5P08648 1049 aa11.01□□□□□ -0.65
VDR-208ENST00000550325 ZNF888P0CJ79 500 aaPredicted RBP11.01□□□□□ -0.65
VDR-208ENST00000550325 SERPINF1P36955 418 aa11.01□□□□□ -0.65
VDR-208ENST00000550325 ECH1Q13011 328 aa11.01□□□□□ -0.65
VDR-208ENST00000550325 PDZD11Q5EBL8 140 aa11.01□□□□□ -0.65
VDR-208ENST00000550325 ABHD13Q7L211 337 aa11.01□□□□□ -0.65
VDR-208ENST00000550325 SKA3Q8IX90 412 aa11.01□□□□□ -0.65
VDR-208ENST00000550325 FAM24BQ8N5W8 94 aa11.01□□□□□ -0.65
VDR-208ENST00000550325 IGSF21Q96ID5 467 aa11.01□□□□□ -0.65
VDR-208ENST00000550325 SMIM3Q9BZL3 60 aa11.01□□□□□ -0.65
VDR-208ENST00000550325 TGIF2Q9GZN2 237 aa11.01□□□□□ -0.65
VDR-208ENST00000550325 FN3KRPQ9HA64 309 aa11.01□□□□□ -0.65
VDR-208ENST00000550325 ACKR4Q9NPB9 350 aa11.01□□□□□ -0.65
VDR-208ENST00000550325 HCFC1R1Q9NWW0 138 aa11.01□□□□□ -0.65
VDR-208ENST00000550325 TMED7Q9Y3B3 224 aa11.01□□□□□ -0.65
VDR-208ENST00000550325 PCDHGA1Q9Y5H4 931 aa11.01□□□□□ -0.65
VDR-208ENST00000550325 A0A1W2PPV9 198 aa11.01□□□□□ -0.65
VDR-208ENST00000550325 ADRB3P13945 408 aa11.01□□□□□ -0.65
VDR-208ENST00000550325 SLC9A3R2Q15599 337 aa11.01□□□□□ -0.65
VDR-208ENST00000550325 TMEM35AQ53FP2 167 aa11.01□□□□□ -0.65
VDR-208ENST00000550325 SHISA5Q8N114 240 aa11.01□□□□□ -0.65
VDR-208ENST00000550325 LILRB2Q8N423 598 aa11.01□□□□□ -0.65
VDR-208ENST00000550325 CLEC1AQ8NC01 280 aa11.01□□□□□ -0.65
VDR-208ENST00000550325 SECTM1Q8WVN6 248 aa11.01□□□□□ -0.65
VDR-208ENST00000550325 RGCCQ9H4X1 137 aa11.01□□□□□ -0.65
VDR-208ENST00000550325 MMP26Q9NRE1 261 aa11.01□□□□□ -0.65
VDR-208ENST00000550325 ATXN7L1Q9ULK2 861 aaPredicted RBP11.01□□□□□ -0.65
VDR-208ENST00000550325 CNTRLQ7Z7A1 2325 aa11.01□□□□□ -0.65
VDR-208ENST00000550325 SDK1Q7Z5N4 2213 aa11□□□□□ -0.65
VDR-208ENST00000550325 A0A1B0GV90 55 aa11□□□□□ -0.65
VDR-208ENST00000550325 ABLIM3O94929 683 aa11□□□□□ -0.65
VDR-208ENST00000550325 CPMP14384 443 aa11□□□□□ -0.65
VDR-208ENST00000550325 DUSP8Q13202 625 aa11□□□□□ -0.65
VDR-208ENST00000550325 ZNF417Q8TAU3 575 aa11□□□□□ -0.65
VDR-208ENST00000550325 SP7Q8TDD2 431 aaPredicted RBP11□□□□□ -0.65
VDR-208ENST00000550325 GPR148Q8TDV2 347 aa11□□□□□ -0.65
VDR-208ENST00000550325 IRF7Q92985 503 aa11□□□□□ -0.65
VDR-208ENST00000550325 PIK3IP1Q96FE7 263 aa11□□□□□ -0.65
VDR-208ENST00000550325 TCEAL7Q9BRU2 100 aa11□□□□□ -0.65
VDR-208ENST00000550325 FLRT3Q9NZU0 649 aa11□□□□□ -0.65
VDR-208ENST00000550325 MRPS33Q9Y291 106 aaKnown RBP11□□□□□ -0.65
VDR-208ENST00000550325 SCN10AQ9Y5Y9 1956 aa11□□□□□ -0.65
VDR-208ENST00000550325 LRP3O75074 770 aa11□□□□□ -0.65
VDR-208ENST00000550325 ITGB2P05107 769 aa11□□□□□ -0.65
VDR-208ENST00000550325 MECP2P51608 486 aaKnown RBP11□□□□□ -0.65
VDR-208ENST00000550325 ARHGAP11BQ3KRB8 267 aa11□□□□□ -0.65
VDR-208ENST00000550325 RNF212Q495C1 297 aa11□□□□□ -0.65
VDR-208ENST00000550325 GLYATL3Q5SZD4 288 aa11□□□□□ -0.65
VDR-208ENST00000550325 ZNF425Q6IV72 752 aa11□□□□□ -0.65
VDR-208ENST00000550325 CXorf40AQ8TE69 158 aa11□□□□□ -0.65
VDR-208ENST00000550325 PHYHIPQ92561 330 aa11□□□□□ -0.65
VDR-208ENST00000550325 HIST1H2BAQ96A08 127 aa11□□□□□ -0.65
VDR-208ENST00000550325 CCDC74AQ96AQ1 378 aa11□□□□□ -0.65
VDR-208ENST00000550325 ELF4Q99607 663 aaPredicted RBP11□□□□□ -0.65
VDR-208ENST00000550325 SLC25A21Q9BQT8 299 aaPredicted RBP11□□□□□ -0.65
VDR-208ENST00000550325 MRI1Q9BV20 369 aa11□□□□□ -0.65
VDR-208ENST00000550325 C5orf52A6NGY3 159 aa11□□□□□ -0.65
VDR-208ENST00000550325 DNAJB6O75190 326 aa11□□□□□ -0.65
VDR-208ENST00000550325 YIF1AO95070 293 aa11□□□□□ -0.65
VDR-208ENST00000550325 ERCC1P07992 297 aaPredicted RBP11□□□□□ -0.65
VDR-208ENST00000550325 PI3P19957 117 aa11□□□□□ -0.65
VDR-208ENST00000550325 PSMB6P28072 239 aa11□□□□□ -0.65
VDR-208ENST00000550325 SPOCK1Q08629 439 aa11□□□□□ -0.65
VDR-208ENST00000550325 ZNF345Q14585 488 aa11□□□□□ -0.65
VDR-208ENST00000550325 SSX9Q7RTT3 188 aa11□□□□□ -0.65
VDR-208ENST00000550325 PARGQ86W56 976 aa11□□□□□ -0.65
VDR-208ENST00000550325 ZNF561Q8N587 486 aa11□□□□□ -0.65
VDR-208ENST00000550325 GVQW1Q8N7I0 195 aa11□□□□□ -0.65
VDR-208ENST00000550325 SEMA6DQ8NFY4 1073 aa11□□□□□ -0.65
VDR-208ENST00000550325 IER2Q9BTL4 223 aa11□□□□□ -0.65
VDR-208ENST00000550325 RCC2Q9P258 522 aaKnown RBP11□□□□□ -0.65
VDR-208ENST00000550325 EPHA6Q9UF33 1036 aa11□□□□□ -0.65
VDR-208ENST00000550325 MRM2Q9UI43 246 aaKnown RBP11□□□□□ -0.65
VDR-208ENST00000550325 SLC22A13Q9Y226 551 aa11□□□□□ -0.65
VDR-208ENST00000550325 VSIG4Q9Y279 399 aa11□□□□□ -0.65
VDR-208ENST00000550325 CARHSP1Q9Y2V2 147 aaKnown RBP11□□□□□ -0.65
VDR-208ENST00000550325 TCF20Q9UGU0 1960 aaKnown RBP11□□□□□ -0.65
VDR-208ENST00000550325 AGR2O95994 175 aa10.99□□□□□ -0.65
VDR-208ENST00000550325 EMDP50402 254 aa10.99□□□□□ -0.65
VDR-208ENST00000550325 IRF5Q13568 498 aa10.99□□□□□ -0.65
VDR-208ENST00000550325 SLC39A5Q6ZMH5 540 aa10.99□□□□□ -0.65
VDR-208ENST00000550325 FRMD1Q8N878 549 aa10.99□□□□□ -0.65
VDR-208ENST00000550325 OR2A1Q8NGT9 310 aa10.99□□□□□ -0.65
VDR-208ENST00000550325 CMBLQ96DG6 245 aa10.99□□□□□ -0.65
VDR-208ENST00000550325 INSM2Q96T92 566 aaPredicted RBP10.99□□□□□ -0.65
VDR-208ENST00000550325 EIF5A2Q9GZV4 153 aaKnown RBP10.99□□□□□ -0.65
VDR-208ENST00000550325 METTL8Q9H825 291 aaKnown RBP10.99□□□□□ -0.65
VDR-208ENST00000550325 CD1CP29017 333 aa10.99□□□□□ -0.65
VDR-208ENST00000550325 SLC22A6Q4U2R8 563 aa10.99□□□□□ -0.65
VDR-208ENST00000550325 VWA2Q5GFL6 755 aa10.99□□□□□ -0.65
VDR-208ENST00000550325 C17orf99Q6UX52 265 aa10.99□□□□□ -0.65
VDR-208ENST00000550325 GALNTL5Q7Z4T8 443 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms