RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 CCNB1IP1Q9NPC3 277 aa13.61□□□□□ -0.23
CCDC78-216ENST00000544996 TAS2R1Q9NYW7 299 aa13.61□□□□□ -0.23
CCDC78-216ENST00000544996 UGT2A1Q9Y4X1 527 aa13.61□□□□□ -0.23
CCDC78-216ENST00000544996 TEP1Q99973 2627 aaKnown RBP13.61□□□□□ -0.23
CCDC78-216ENST00000544996 ARID1AO14497 2285 aa13.61□□□□□ -0.23
CCDC78-216ENST00000544996 ALPK2Q86TB3 2170 aa13.61□□□□□ -0.23
CCDC78-216ENST00000544996 SMAD7O15105 426 aaKnown RBP13.6□□□□□ -0.23
CCDC78-216ENST00000544996 ZNF26P17031 533 aaPredicted RBP13.6□□□□□ -0.23
CCDC78-216ENST00000544996 CDAP32320 146 aa13.6□□□□□ -0.23
CCDC78-216ENST00000544996 RPS6KA3P51812 740 aa13.6□□□□□ -0.23
CCDC78-216ENST00000544996 DSCR9P59020 149 aa13.6□□□□□ -0.23
CCDC78-216ENST00000544996 RPS23P62266 143 aaKnown RBP13.6□□□□□ -0.23
CCDC78-216ENST00000544996 HSF2Q03933 536 aa13.6□□□□□ -0.23
CCDC78-216ENST00000544996 TNK1Q13470 666 aa13.6□□□□□ -0.23
CCDC78-216ENST00000544996 FAM98BQ52LJ0 330 aaKnown RBP13.6□□□□□ -0.23
CCDC78-216ENST00000544996 FAM27BQ5VT28 67 aa13.6□□□□□ -0.23
CCDC78-216ENST00000544996 SMARCD3Q6STE5 483 aa13.6□□□□□ -0.23
CCDC78-216ENST00000544996 DPY19L2P2Q6ZN68 376 aa13.6□□□□□ -0.23
CCDC78-216ENST00000544996 ZER1Q7Z7L7 766 aa13.6□□□□□ -0.23
CCDC78-216ENST00000544996 ZNF584Q8IVC4 421 aa13.6□□□□□ -0.23
CCDC78-216ENST00000544996 CIARTQ8N365 385 aaPredicted RBP13.6□□□□□ -0.23
CCDC78-216ENST00000544996 CLDN22Q8N7P3 220 aa13.6□□□□□ -0.23
CCDC78-216ENST00000544996 SLC30A7Q8NEW0 376 aa13.6□□□□□ -0.23
CCDC78-216ENST00000544996 OR1J2Q8NGS2 313 aa13.6□□□□□ -0.23
CCDC78-216ENST00000544996 CCDC124Q96CT7 223 aaKnown RBP13.6□□□□□ -0.23
CCDC78-216ENST00000544996 ASB9Q96DX5 294 aa13.6□□□□□ -0.23
CCDC78-216ENST00000544996 Q96M85 177 aa13.6□□□□□ -0.23
CCDC78-216ENST00000544996 GPX7Q96SL4 187 aaPredicted RBP13.6□□□□□ -0.23
CCDC78-216ENST00000544996 THTPAQ9BU02 230 aa13.6□□□□□ -0.23
CCDC78-216ENST00000544996 PLK3Q9H4B4 646 aa13.6□□□□□ -0.23
CCDC78-216ENST00000544996 MAGIXQ9H6Y5 334 aa13.6□□□□□ -0.23
CCDC78-216ENST00000544996 NRIP3Q9NQ35 241 aa13.6□□□□□ -0.23
CCDC78-216ENST00000544996 CMAHPQ9Y471 501 aa13.6□□□□□ -0.23
CCDC78-216ENST00000544996 USF3Q68DE3 2245 aa13.6□□□□□ -0.23
CCDC78-216ENST00000544996 MED13LQ71F56 2210 aa13.6□□□□□ -0.23
CCDC78-216ENST00000544996 IGKV1D-43A0A0B4J1Z2 117 aa13.59□□□□□ -0.23
CCDC78-216ENST00000544996 A0A1W2PPL8 197 aa13.59□□□□□ -0.23
CCDC78-216ENST00000544996 PRSS37A4D1T9 235 aa13.59□□□□□ -0.23
CCDC78-216ENST00000544996 GYG2O15488 501 aa13.59□□□□□ -0.23
CCDC78-216ENST00000544996 FPR3P25089 353 aa13.59□□□□□ -0.23
CCDC78-216ENST00000544996 SDHAP31040 664 aa13.59□□□□□ -0.23
CCDC78-216ENST00000544996 EFNA4P52798 201 aa13.59□□□□□ -0.23
CCDC78-216ENST00000544996 PCBD1P61457 104 aa13.59□□□□□ -0.23
CCDC78-216ENST00000544996 MS4A2Q01362 244 aa13.59□□□□□ -0.23
CCDC78-216ENST00000544996 KRR1Q13601 381 aaKnown RBP13.59□□□□□ -0.23
CCDC78-216ENST00000544996 TBC1D28Q2M2D7 210 aa13.59□□□□□ -0.23
CCDC78-216ENST00000544996 DNAL1Q4LDG9 190 aa13.59□□□□□ -0.23
CCDC78-216ENST00000544996 CLEC2AQ6UVW9 174 aa13.59□□□□□ -0.23
CCDC78-216ENST00000544996 CLEC9AQ6UXN8 241 aa13.59□□□□□ -0.23
CCDC78-216ENST00000544996 FAM122BQ7Z309 247 aa13.59□□□□□ -0.23
CCDC78-216ENST00000544996 LINC00471Q8N535 108 aa13.59□□□□□ -0.23
CCDC78-216ENST00000544996 VRK1Q99986 396 aaPredicted RBP13.59□□□□□ -0.23
CCDC78-216ENST00000544996 RHNO1Q9BSD3 238 aa13.59□□□□□ -0.23
CCDC78-216ENST00000544996 TRIM15Q9C019 465 aa13.59□□□□□ -0.23
CCDC78-216ENST00000544996 GSX1Q9H4S2 264 aaPredicted RBP13.59□□□□□ -0.23
CCDC78-216ENST00000544996 CDH20Q9HBT6 801 aa13.59□□□□□ -0.23
CCDC78-216ENST00000544996 IL20RAQ9UHF4 553 aa13.59□□□□□ -0.23
CCDC78-216ENST00000544996 SLC7A8Q9UHI5 535 aa13.59□□□□□ -0.23
CCDC78-216ENST00000544996 FKBP7Q9Y680 259 aa13.59□□□□□ -0.23
CCDC78-216ENST00000544996 TEX13CA0A0J9YWL9 993 aa13.58□□□□□ -0.24
CCDC78-216ENST00000544996 TCRBV5S2A0A599 114 aa13.58□□□□□ -0.24
CCDC78-216ENST00000544996 SLC22A23A1A5C7 686 aa13.58□□□□□ -0.24
CCDC78-216ENST00000544996 H7C1C5 153 aa13.58□□□□□ -0.24
CCDC78-216ENST00000544996 TNFRSF11BO00300 401 aa13.58□□□□□ -0.24
CCDC78-216ENST00000544996 UBOX5O94941 541 aa13.58□□□□□ -0.24
CCDC78-216ENST00000544996 F12P00748 615 aaPredicted RBP13.58□□□□□ -0.24
CCDC78-216ENST00000544996 ERCC1P07992 297 aaPredicted RBP13.58□□□□□ -0.24
CCDC78-216ENST00000544996 LAP3P28838 519 aa13.58□□□□□ -0.24
CCDC78-216ENST00000544996 SLC6A6P31641 620 aa13.58□□□□□ -0.24
CCDC78-216ENST00000544996 APLNRP35414 380 aa13.58□□□□□ -0.24
CCDC78-216ENST00000544996 GLRXP35754 106 aa13.58□□□□□ -0.24
CCDC78-216ENST00000544996 MAGEA2P43356 314 aa13.58□□□□□ -0.24
CCDC78-216ENST00000544996 HMGA2P52926 109 aa13.58□□□□□ -0.24
CCDC78-216ENST00000544996 RIPPLY3P57055 190 aa13.58□□□□□ -0.24
CCDC78-216ENST00000544996 LCN6P62502 163 aa13.58□□□□□ -0.24
CCDC78-216ENST00000544996 TRAP1Q12931 704 aaKnown RBP13.58□□□□□ -0.24
CCDC78-216ENST00000544996 RFX4Q33E94 735 aa13.58□□□□□ -0.24
CCDC78-216ENST00000544996 MESTQ5EB52 335 aa13.58□□□□□ -0.24
CCDC78-216ENST00000544996 THSD4Q6ZMP0 1018 aa13.58□□□□□ -0.24
CCDC78-216ENST00000544996 ADCK1Q86TW2 530 aa13.58□□□□□ -0.24
CCDC78-216ENST00000544996 ALDH16A1Q8IZ83 802 aa13.58□□□□□ -0.24
CCDC78-216ENST00000544996 FANK1Q8TC84 345 aa13.58□□□□□ -0.24
CCDC78-216ENST00000544996 GNPDA2Q8TDQ7 276 aa13.58□□□□□ -0.24
CCDC78-216ENST00000544996 NABP1Q96AH0 204 aa13.58□□□□□ -0.24
CCDC78-216ENST00000544996 CLPTM1LQ96KA5 538 aa13.58□□□□□ -0.24
CCDC78-216ENST00000544996 GPA33Q99795 319 aa13.58□□□□□ -0.24
CCDC78-216ENST00000544996 SMR3AQ99954 134 aa13.58□□□□□ -0.24
CCDC78-216ENST00000544996 RAB1BQ9H0U4 201 aa13.58□□□□□ -0.24
CCDC78-216ENST00000544996 IER3IP1Q9Y5U9 82 aa13.58□□□□□ -0.24
CCDC78-216ENST00000544996 HEATR1Q9H583 2144 aaKnown RBP13.57□□□□□ -0.24
CCDC78-216ENST00000544996 RNF223E7ERA6 249 aa13.57□□□□□ -0.24
CCDC78-216ENST00000544996 SOCS2O14508 198 aa13.57□□□□□ -0.24
CCDC78-216ENST00000544996 SNAP29O95721 258 aa13.57□□□□□ -0.24
CCDC78-216ENST00000544996 CST2P09228 141 aa13.57□□□□□ -0.24
CCDC78-216ENST00000544996 MMP7P09237 267 aaPredicted RBP13.57□□□□□ -0.24
CCDC78-216ENST00000544996 CSF3P09919 207 aa13.57□□□□□ -0.24
CCDC78-216ENST00000544996 APEHP13798 732 aaKnown RBP13.57□□□□□ -0.24
CCDC78-216ENST00000544996 ZNF32P17041 273 aa13.57□□□□□ -0.24
CCDC78-216ENST00000544996 MSR1P21757 451 aa13.57□□□□□ -0.24
CCDC78-216ENST00000544996 PPOXP50336 477 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms