RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 DDOQ99489 341 aa8.39□□□□□ -1.07
RNF4-221ENST00000513643 DOK1Q99704 481 aa8.39□□□□□ -1.07
RNF4-221ENST00000513643 SH3GL3Q99963 347 aa8.39□□□□□ -1.07
RNF4-221ENST00000513643 VSX1Q9NZR4 365 aaPredicted RBP8.39□□□□□ -1.07
RNF4-221ENST00000513643 POU2F3Q9UKI9 436 aa8.39□□□□□ -1.07
RNF4-221ENST00000513643 ADAM18Q9Y3Q7 739 aa8.39□□□□□ -1.07
RNF4-221ENST00000513643 V9GYQ6 96 aa8.39□□□□□ -1.07
RNF4-221ENST00000513643 ABCA1O95477 2261 aa8.38□□□□□ -1.07
RNF4-221ENST00000513643 A0A096LNT2 108 aa8.38□□□□□ -1.07
RNF4-221ENST00000513643 PRSS37A4D1T9 235 aa8.38□□□□□ -1.07
RNF4-221ENST00000513643 TRIM64A6NGJ6 449 aa8.38□□□□□ -1.07
RNF4-221ENST00000513643 TRIM64BA6NI03 449 aa8.38□□□□□ -1.07
RNF4-221ENST00000513643 UNC119BA6NIH7 251 aa8.38□□□□□ -1.07
RNF4-221ENST00000513643 AQP12BA6NM10 295 aa8.38□□□□□ -1.07
RNF4-221ENST00000513643 B9A039 149 aa8.38□□□□□ -1.07
RNF4-221ENST00000513643 IMPA2O14732 288 aa8.38□□□□□ -1.07
RNF4-221ENST00000513643 ICMTO60725 284 aa8.38□□□□□ -1.07
RNF4-221ENST00000513643 SNAP29O95721 258 aa8.38□□□□□ -1.07
RNF4-221ENST00000513643 OR4A8P0C604 315 aa8.38□□□□□ -1.07
RNF4-221ENST00000513643 CD79AP11912 226 aa8.38□□□□□ -1.07
RNF4-221ENST00000513643 NR2C1P13056 603 aa8.38□□□□□ -1.07
RNF4-221ENST00000513643 SDHAP31040 664 aa8.38□□□□□ -1.07
RNF4-221ENST00000513643 CDAP32320 146 aa8.38□□□□□ -1.07
RNF4-221ENST00000513643 THBS4P35443 961 aa8.38□□□□□ -1.07
RNF4-221ENST00000513643 GLRXP35754 106 aa8.38□□□□□ -1.07
RNF4-221ENST00000513643 EVX1P49640 407 aa8.38□□□□□ -1.07
RNF4-221ENST00000513643 TSPAN31Q12999 210 aa8.38□□□□□ -1.07
RNF4-221ENST00000513643 RAB39AQ14964 217 aa8.38□□□□□ -1.07
RNF4-221ENST00000513643 RFX4Q33E94 735 aa8.38□□□□□ -1.07
RNF4-221ENST00000513643 FGD3Q5JSP0 725 aa8.38□□□□□ -1.07
RNF4-221ENST00000513643 ZNF362Q5T0B9 420 aaPredicted RBP8.38□□□□□ -1.07
RNF4-221ENST00000513643 GPR139Q6DWJ6 353 aa8.38□□□□□ -1.07
RNF4-221ENST00000513643 PGBD2Q6P3X8 592 aa8.38□□□□□ -1.07
RNF4-221ENST00000513643 SMARCD3Q6STE5 483 aa8.38□□□□□ -1.07
RNF4-221ENST00000513643 AQP12AQ8IXF9 295 aa8.38□□□□□ -1.07
RNF4-221ENST00000513643 ADGRG5Q8IZF4 528 aa8.38□□□□□ -1.07
RNF4-221ENST00000513643 CPEB3Q8NE35 698 aaKnown RBP8.38□□□□□ -1.07
RNF4-221ENST00000513643 NANOS1Q8WY41 292 aaKnown RBP8.38□□□□□ -1.07
RNF4-221ENST00000513643 HTRA1Q92743 480 aa8.38□□□□□ -1.07
RNF4-221ENST00000513643 FBXO17Q96EF6 278 aa8.38□□□□□ -1.07
RNF4-221ENST00000513643 BDH2Q9BUT1 245 aa8.38□□□□□ -1.07
RNF4-221ENST00000513643 CACNG6Q9BXT2 260 aa8.38□□□□□ -1.07
RNF4-221ENST00000513643 VNN3Q9NY84 501 aa8.38□□□□□ -1.07
RNF4-221ENST00000513643 GDF2Q9UK05 429 aaPredicted RBP8.38□□□□□ -1.07
RNF4-221ENST00000513643 SONP18583 2426 aaKnown RBP8.38□□□□□ -1.07
RNF4-221ENST00000513643 HIVEP2P31629 2446 aa8.38□□□□□ -1.07
RNF4-221ENST00000513643 SVEP1Q4LDE5 3571 aa8.37□□□□□ -1.07
RNF4-221ENST00000513643 FARS2O95363 451 aaKnown RBP8.37□□□□□ -1.07
RNF4-221ENST00000513643 F12P00748 615 aaPredicted RBP8.37□□□□□ -1.07
RNF4-221ENST00000513643 CST2P09228 141 aa8.37□□□□□ -1.07
RNF4-221ENST00000513643 INHBBP09529 407 aa8.37□□□□□ -1.07
RNF4-221ENST00000513643 CTLA4P16410 223 aa8.37□□□□□ -1.07
RNF4-221ENST00000513643 PCSK6P29122 969 aa8.37□□□□□ -1.07
RNF4-221ENST00000513643 CDKN2AP42771 156 aaKnown RBP8.37□□□□□ -1.07
RNF4-221ENST00000513643 PTDSS1P48651 473 aaKnown RBP8.37□□□□□ -1.07
RNF4-221ENST00000513643 ZNF84P51523 738 aa8.37□□□□□ -1.07
RNF4-221ENST00000513643 PSG4Q00888 419 aa8.37□□□□□ -1.07
RNF4-221ENST00000513643 SPIBQ01892 262 aa8.37□□□□□ -1.07
RNF4-221ENST00000513643 CHRNB3Q05901 458 aa8.37□□□□□ -1.07
RNF4-221ENST00000513643 NPRL3Q12980 569 aa8.37□□□□□ -1.07
RNF4-221ENST00000513643 TNK1Q13470 666 aa8.37□□□□□ -1.07
RNF4-221ENST00000513643 TOP3AQ13472 1001 aaPredicted RBP8.37□□□□□ -1.07
RNF4-221ENST00000513643 ENDOGQ14249 297 aaKnown RBP8.37□□□□□ -1.07
RNF4-221ENST00000513643 GK3PQ14409 553 aa8.37□□□□□ -1.07
RNF4-221ENST00000513643 KCNMB1Q16558 191 aa8.37□□□□□ -1.07
RNF4-221ENST00000513643 CLEC12BQ2HXU8 276 aa8.37□□□□□ -1.07
RNF4-221ENST00000513643 SLC36A2Q495M3 483 aa8.37□□□□□ -1.07
RNF4-221ENST00000513643 CD300LDQ6UXZ3 194 aa8.37□□□□□ -1.07
RNF4-221ENST00000513643 PTCHD4Q6ZW05 846 aa8.37□□□□□ -1.07
RNF4-221ENST00000513643 SLC16A14Q7RTX9 510 aa8.37□□□□□ -1.07
RNF4-221ENST00000513643 SYT9Q86SS6 491 aa8.37□□□□□ -1.07
RNF4-221ENST00000513643 ADCK1Q86TW2 530 aa8.37□□□□□ -1.07
RNF4-221ENST00000513643 BIVMQ86UB2 503 aa8.37□□□□□ -1.07
RNF4-221ENST00000513643 PAQR4Q8N4S7 273 aaPredicted RBP8.37□□□□□ -1.07
RNF4-221ENST00000513643 LINC00471Q8N535 108 aa8.37□□□□□ -1.07
RNF4-221ENST00000513643 PAPD5Q8NDF8 572 aaKnown RBP8.37□□□□□ -1.07
RNF4-221ENST00000513643 POM121L2Q96KW2 1035 aa8.37□□□□□ -1.07
RNF4-221ENST00000513643 SNX18Q96RF0 628 aa8.37□□□□□ -1.07
RNF4-221ENST00000513643 BTBD10Q9BSF8 475 aa8.37□□□□□ -1.07
RNF4-221ENST00000513643 WACQ9BTA9 647 aa8.37□□□□□ -1.07
RNF4-221ENST00000513643 THTPAQ9BU02 230 aa8.37□□□□□ -1.07
RNF4-221ENST00000513643 C1orf198Q9H425 327 aa8.37□□□□□ -1.07
RNF4-221ENST00000513643 GSX1Q9H4S2 264 aaPredicted RBP8.37□□□□□ -1.07
RNF4-221ENST00000513643 BARX1Q9HBU1 254 aaPredicted RBP8.37□□□□□ -1.07
RNF4-221ENST00000513643 POLE4Q9NR33 117 aa8.37□□□□□ -1.07
RNF4-221ENST00000513643 IL20Q9NYY1 176 aa8.37□□□□□ -1.07
RNF4-221ENST00000513643 GRHPRQ9UBQ7 328 aa8.37□□□□□ -1.07
RNF4-221ENST00000513643 IER3IP1Q9Y5U9 82 aa8.37□□□□□ -1.07
RNF4-221ENST00000513643 JMJD1CQ15652 2540 aa8.37□□□□□ -1.07
RNF4-221ENST00000513643 IGLV3-9A0A075B6K5 115 aa8.36□□□□□ -1.07
RNF4-221ENST00000513643 LOC100509620A0A075B734 347 aa8.36□□□□□ -1.07
RNF4-221ENST00000513643 TEX13CA0A0J9YWL9 993 aa8.36□□□□□ -1.07
RNF4-221ENST00000513643 TCRBV3S1A0A5B6 114 aa8.36□□□□□ -1.07
RNF4-221ENST00000513643 H7C1Q1 480 aa8.36□□□□□ -1.07
RNF4-221ENST00000513643 TNFRSF11BO00300 401 aa8.36□□□□□ -1.07
RNF4-221ENST00000513643 GSC2O15499 205 aa8.36□□□□□ -1.07
RNF4-221ENST00000513643 IDH3BO43837 385 aa8.36□□□□□ -1.07
RNF4-221ENST00000513643 RAB36O95755 333 aa8.36□□□□□ -1.07
RNF4-221ENST00000513643 GASTP01350 101 aa8.36□□□□□ -1.07
RNF4-221ENST00000513643 TP53P04637 393 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms