RNA–Protein interactions for RNA: ENST00000509436.1

NDFIP1-204, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 5

Gene NDFIP1, Length 584 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-204ENST00000509436 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.26□□□□□ -0.13
NDFIP1-204ENST00000509436 SLC22A23A1A5C7 686 aa14.25□□□□□ -0.13
NDFIP1-204ENST00000509436 NKX2-6A6NCS4 301 aa14.25□□□□□ -0.13
NDFIP1-204ENST00000509436 MBD3L4A6NDZ8 208 aaPredicted RBP14.25□□□□□ -0.13
NDFIP1-204ENST00000509436 MBD3L3A6NE82 208 aaPredicted RBP14.25□□□□□ -0.13
NDFIP1-204ENST00000509436 MBD3L5A6NJ08 208 aaPredicted RBP14.25□□□□□ -0.13
NDFIP1-204ENST00000509436 OR6C65A6NJZ3 312 aa14.25□□□□□ -0.13
NDFIP1-204ENST00000509436 FAM20BO75063 409 aa14.25□□□□□ -0.13
NDFIP1-204ENST00000509436 MRPL33O75394 65 aaKnown RBP14.25□□□□□ -0.13
NDFIP1-204ENST00000509436 ZNF432O94892 652 aa14.25□□□□□ -0.13
NDFIP1-204ENST00000509436 PGA4P0DJD7 388 aa14.25□□□□□ -0.13
NDFIP1-204ENST00000509436 PGA3P0DJD8 388 aa14.25□□□□□ -0.13
NDFIP1-204ENST00000509436 PCSK6P29122 969 aa14.25□□□□□ -0.13
NDFIP1-204ENST00000509436 CRABP1P29762 137 aa14.25□□□□□ -0.13
NDFIP1-204ENST00000509436 HOXC12P31275 282 aa14.25□□□□□ -0.13
NDFIP1-204ENST00000509436 FMO3P31513 532 aa14.25□□□□□ -0.13
NDFIP1-204ENST00000509436 CDH11P55287 796 aa14.25□□□□□ -0.13
NDFIP1-204ENST00000509436 RPS7P62081 194 aaKnown RBP14.25□□□□□ -0.13
NDFIP1-204ENST00000509436 RUNX1T1Q06455 604 aa14.25□□□□□ -0.13
NDFIP1-204ENST00000509436 KLHL12Q53G59 568 aa14.25□□□□□ -0.13
NDFIP1-204ENST00000509436 RBM48Q5RL73 367 aaKnown RBP14.25□□□□□ -0.13
NDFIP1-204ENST00000509436 THEM4Q5T1C6 240 aa14.25□□□□□ -0.13
NDFIP1-204ENST00000509436 LCN1P1Q5VSP4 162 aa14.25□□□□□ -0.13
NDFIP1-204ENST00000509436 AADACL4Q5VUY2 407 aa14.25□□□□□ -0.13
NDFIP1-204ENST00000509436 B3GNT6Q6ZMB0 384 aa14.25□□□□□ -0.13
NDFIP1-204ENST00000509436 KRTAP1-3Q8IUG1 177 aa14.25□□□□□ -0.13
NDFIP1-204ENST00000509436 C9orf106Q8NAJ2 232 aa14.25□□□□□ -0.13
NDFIP1-204ENST00000509436 SYT14Q8NB59 555 aa14.25□□□□□ -0.13
NDFIP1-204ENST00000509436 OR6N1Q8NGY5 312 aa14.25□□□□□ -0.13
NDFIP1-204ENST00000509436 MBD3L2Q8NHZ7 208 aaPredicted RBP14.25□□□□□ -0.13
NDFIP1-204ENST00000509436 ZFP3Q96NJ6 502 aa14.25□□□□□ -0.13
NDFIP1-204ENST00000509436 NR1H4Q96RI1 486 aaPredicted RBP14.25□□□□□ -0.13
NDFIP1-204ENST00000509436 MRPL13Q9BYD1 178 aaKnown RBP14.25□□□□□ -0.13
NDFIP1-204ENST00000509436 YTHDF1Q9BYJ9 559 aaKnown RBP14.25□□□□□ -0.13
NDFIP1-204ENST00000509436 SYT4Q9H2B2 425 aa14.25□□□□□ -0.13
NDFIP1-204ENST00000509436 OR51V1Q9H2C8 321 aa14.25□□□□□ -0.13
NDFIP1-204ENST00000509436 MED20Q9H944 212 aa14.25□□□□□ -0.13
NDFIP1-204ENST00000509436 B3GAT2Q9NPZ5 323 aa14.25□□□□□ -0.13
NDFIP1-204ENST00000509436 ASB6Q9NWX5 421 aa14.25□□□□□ -0.13
NDFIP1-204ENST00000509436 SCN3BQ9NY72 215 aa14.25□□□□□ -0.13
NDFIP1-204ENST00000509436 CLEC4AQ9UMR7 237 aa14.25□□□□□ -0.13
NDFIP1-204ENST00000509436 EMC9Q9Y3B6 208 aa14.25□□□□□ -0.13
NDFIP1-204ENST00000509436 RPL36Q9Y3U8 105 aaKnown RBP14.25□□□□□ -0.13
NDFIP1-204ENST00000509436 FKBP7Q9Y680 259 aa14.25□□□□□ -0.13
NDFIP1-204ENST00000509436 SLC22A31A6NKX4 558 aa14.24□□□□□ -0.13
NDFIP1-204ENST00000509436 SS18L1O75177 396 aaPredicted RBP14.24□□□□□ -0.13
NDFIP1-204ENST00000509436 CCDC159P0C7I6 412 aa14.24□□□□□ -0.13
NDFIP1-204ENST00000509436 SPI1P17947 270 aa14.24□□□□□ -0.13
NDFIP1-204ENST00000509436 AGTR1P30556 359 aa14.24□□□□□ -0.13
NDFIP1-204ENST00000509436 SELENOPP49908 381 aa14.24□□□□□ -0.13
NDFIP1-204ENST00000509436 CHN2P52757 468 aa14.24□□□□□ -0.13
NDFIP1-204ENST00000509436 TMED1Q13445 227 aa14.24□□□□□ -0.13
NDFIP1-204ENST00000509436 SLC35D3Q5M8T2 416 aa14.24□□□□□ -0.13
NDFIP1-204ENST00000509436 MEPCEQ7L2J0 689 aaKnown RBP14.24□□□□□ -0.13
NDFIP1-204ENST00000509436 BCDIN3DQ7Z5W3 292 aaKnown RBP14.24□□□□□ -0.13
NDFIP1-204ENST00000509436 TMEM123Q8N131 208 aa14.24□□□□□ -0.13
NDFIP1-204ENST00000509436 PROKR2Q8NFJ6 384 aa14.24□□□□□ -0.13
NDFIP1-204ENST00000509436 BBS1Q8NFJ9 593 aa14.24□□□□□ -0.13
NDFIP1-204ENST00000509436 BPIFB6Q8NFQ5 453 aa14.24□□□□□ -0.13
NDFIP1-204ENST00000509436 OR9Q1Q8NGQ5 310 aa14.24□□□□□ -0.13
NDFIP1-204ENST00000509436 LILRB4Q8NHJ6 448 aa14.24□□□□□ -0.13
NDFIP1-204ENST00000509436 PTP4A1Q93096 173 aa14.24□□□□□ -0.13
NDFIP1-204ENST00000509436 NMNAT2Q9BZQ4 307 aa14.24□□□□□ -0.13
NDFIP1-204ENST00000509436 SRA1Q9HD15 236 aaKnown RBP14.24□□□□□ -0.13
NDFIP1-204ENST00000509436 GLTPQ9NZD2 209 aa14.24□□□□□ -0.13
NDFIP1-204ENST00000509436 WARS2Q9UGM6 360 aaKnown RBP14.24□□□□□ -0.13
NDFIP1-204ENST00000509436 MOKQ9UQ07 419 aa14.24□□□□□ -0.13
NDFIP1-204ENST00000509436 MYRFQ9Y2G1 1151 aa14.24□□□□□ -0.13
NDFIP1-204ENST00000509436 TPRKBQ9Y3C4 175 aa14.24□□□□□ -0.13
NDFIP1-204ENST00000509436 PCDHGB5Q9Y5G0 923 aa14.24□□□□□ -0.13
NDFIP1-204ENST00000509436 SLC1A7O00341 560 aa14.23□□□□□ -0.13
NDFIP1-204ENST00000509436 SLC16A7O60669 478 aa14.23□□□□□ -0.13
NDFIP1-204ENST00000509436 KHDRBS3O75525 346 aaKnown RBP14.23□□□□□ -0.13
NDFIP1-204ENST00000509436 IL2RAP01589 272 aa14.23□□□□□ -0.13
NDFIP1-204ENST00000509436 CRHP06850 196 aa14.23□□□□□ -0.13
NDFIP1-204ENST00000509436 HTR1FP30939 366 aa14.23□□□□□ -0.13
NDFIP1-204ENST00000509436 TIMP3P35625 211 aa14.23□□□□□ -0.13
NDFIP1-204ENST00000509436 CENPAP49450 140 aa14.23□□□□□ -0.13
NDFIP1-204ENST00000509436 BLVRAP53004 296 aa14.23□□□□□ -0.13
NDFIP1-204ENST00000509436 APOFQ13790 326 aa14.23□□□□□ -0.13
NDFIP1-204ENST00000509436 SMN1Q16637 294 aaKnown RBP14.23□□□□□ -0.13
NDFIP1-204ENST00000509436 RTL6Q6ICC9 239 aa14.23□□□□□ -0.13
NDFIP1-204ENST00000509436 UGT2A3Q6UWM9 527 aa14.23□□□□□ -0.13
NDFIP1-204ENST00000509436 C3P1Q6ZMU1 363 aa14.23□□□□□ -0.13
NDFIP1-204ENST00000509436 C20orf196Q8IYI0 205 aa14.23□□□□□ -0.13
NDFIP1-204ENST00000509436 ZNF100Q8IYN0 542 aa14.23□□□□□ -0.13
NDFIP1-204ENST00000509436 GPR137CQ8N3F9 429 aa14.23□□□□□ -0.13
NDFIP1-204ENST00000509436 TMEM54Q969K7 222 aa14.23□□□□□ -0.13
NDFIP1-204ENST00000509436 APH1AQ96BI3 265 aa14.23□□□□□ -0.13
NDFIP1-204ENST00000509436 HCAR1Q9BXC0 346 aa14.23□□□□□ -0.13
NDFIP1-204ENST00000509436 NUAK2Q9H093 628 aa14.23□□□□□ -0.13
NDFIP1-204ENST00000509436 RACGAP1Q9H0H5 632 aa14.23□□□□□ -0.13
NDFIP1-204ENST00000509436 RERGLQ9H628 205 aa14.23□□□□□ -0.13
NDFIP1-204ENST00000509436 PLCXD1Q9NUJ7 323 aa14.23□□□□□ -0.13
NDFIP1-204ENST00000509436 EDARQ9UNE0 448 aa14.23□□□□□ -0.13
NDFIP1-204ENST00000509436 B9D1Q9UPM9 204 aa14.23□□□□□ -0.13
NDFIP1-204ENST00000509436 FAM215AQ9Y5M1 114 aa14.23□□□□□ -0.13
NDFIP1-204ENST00000509436 HIVEP2P31629 2446 aa14.23□□□□□ -0.13
NDFIP1-204ENST00000509436 IRGMA1A4Y4 181 aa14.22□□□□□ -0.13
NDFIP1-204ENST00000509436 SMNDC1O75940 238 aaKnown RBP eCLIP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms