RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, human

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCM2-215	ENST00000482714	MEDAG	Q5VYS4	303 aa		13.47	□□□□□ -0.25
CCM2-215	ENST00000482714	SYT9	Q86SS6	491 aa		13.47	□□□□□ -0.25
CCM2-215	ENST00000482714	GLB1L2	Q8IW92	636 aa		13.47	□□□□□ -0.25
CCM2-215	ENST00000482714	TMEM163	Q8TC26	289 aa		13.47	□□□□□ -0.25
CCM2-215	ENST00000482714	ZNF837	Q96EG3	531 aa	Predicted RBP	13.47	□□□□□ -0.25
CCM2-215	ENST00000482714	RPRD1B	Q9NQG5	326 aa	Known RBP	13.47	□□□□□ -0.25
CCM2-215	ENST00000482714	TMEM38B	Q9NVV0	291 aa		13.47	□□□□□ -0.25
CCM2-215	ENST00000482714	PTPN13	Q12923	2485 aa		13.47	□□□□□ -0.25
CCM2-215	ENST00000482714	IGLV1-36	A0A0B4J1U3	117 aa		13.46	□□□□□ -0.25
CCM2-215	ENST00000482714	OR5H1	A6NKK0	313 aa		13.46	□□□□□ -0.25
CCM2-215	ENST00000482714	SNTN	A6NMZ2	147 aa		13.46	□□□□□ -0.25
CCM2-215	ENST00000482714	LYZL6	O75951	148 aa		13.46	□□□□□ -0.25
CCM2-215	ENST00000482714	SLC2A10	O95528	541 aa		13.46	□□□□□ -0.25
CCM2-215	ENST00000482714	FOXG1	P55316	489 aa	Predicted RBP	13.46	□□□□□ -0.25
CCM2-215	ENST00000482714	SNRPG	P62308	76 aa	Known RBP	13.46	□□□□□ -0.25
CCM2-215	ENST00000482714	LSM6	P62312	80 aa	Known RBP	13.46	□□□□□ -0.25
CCM2-215	ENST00000482714	ADARB1	P78563	741 aa	Known RBP	13.46	□□□□□ -0.25
CCM2-215	ENST00000482714	HSF2	Q03933	536 aa		13.46	□□□□□ -0.25
CCM2-215	ENST00000482714	TMED1	Q13445	227 aa		13.46	□□□□□ -0.25
CCM2-215	ENST00000482714	NXNL2	Q5VZ03	156 aa		13.46	□□□□□ -0.25
CCM2-215	ENST00000482714	ZNF813	Q6ZN06	617 aa		13.46	□□□□□ -0.25
CCM2-215	ENST00000482714	CPO	Q8IVL8	374 aa		13.46	□□□□□ -0.25
CCM2-215	ENST00000482714	SLC22A24	Q8N4F4	322 aa		13.46	□□□□□ -0.25
CCM2-215	ENST00000482714	FAM169B	Q8N8A8	192 aa		13.46	□□□□□ -0.25
CCM2-215	ENST00000482714	TCEANC	Q8N8B7	351 aa		13.46	□□□□□ -0.25
CCM2-215	ENST00000482714	SETD9	Q8NE22	299 aa		13.46	□□□□□ -0.25
CCM2-215	ENST00000482714	TFAP2C	Q92754	450 aa		13.46	□□□□□ -0.25
CCM2-215	ENST00000482714	MUCL1	Q96DR8	90 aa		13.46	□□□□□ -0.25
CCM2-215	ENST00000482714	ADI1	Q9BV57	179 aa		13.46	□□□□□ -0.25
CCM2-215	ENST00000482714	KCNN2	Q9H2S1	579 aa		13.46	□□□□□ -0.25
CCM2-215	ENST00000482714	NELFA	Q9H3P2	528 aa		13.46	□□□□□ -0.25
CCM2-215	ENST00000482714	IMPAD1	Q9NX62	359 aa		13.46	□□□□□ -0.25
CCM2-215	ENST00000482714	AMDHD2	Q9Y303	409 aa		13.46	□□□□□ -0.25
CCM2-215	ENST00000482714	UGT2A1	Q9Y4X1	527 aa		13.46	□□□□□ -0.25
CCM2-215	ENST00000482714	ARPC4-TTLL3	A0A0A6YYG9	625 aa		13.45	□□□□□ -0.26
CCM2-215	ENST00000482714	IGKV1D-43	A0A0B4J1Z2	117 aa		13.45	□□□□□ -0.26
CCM2-215	ENST00000482714		H7C1C5	153 aa		13.45	□□□□□ -0.26
CCM2-215	ENST00000482714	WNT11	O96014	354 aa		13.45	□□□□□ -0.26
CCM2-215	ENST00000482714	HOXC12	P31275	282 aa		13.45	□□□□□ -0.26
CCM2-215	ENST00000482714	LCN6	P62502	163 aa		13.45	□□□□□ -0.26
CCM2-215	ENST00000482714	FMOD	Q06828	376 aa		13.45	□□□□□ -0.26
CCM2-215	ENST00000482714	SNCB	Q16143	134 aa		13.45	□□□□□ -0.26
CCM2-215	ENST00000482714	FBXW10	Q5XX13	1052 aa		13.45	□□□□□ -0.26
CCM2-215	ENST00000482714	CXXC5	Q7LFL8	322 aa	Known RBP	13.45	□□□□□ -0.26
CCM2-215	ENST00000482714	CYB561A3	Q8NBI2	242 aa		13.45	□□□□□ -0.26
CCM2-215	ENST00000482714	ACBD4	Q8NC06	268 aa		13.45	□□□□□ -0.26
CCM2-215	ENST00000482714	RHOXF1	Q8NHV9	184 aa		13.45	□□□□□ -0.26
CCM2-215	ENST00000482714	NSMAF	Q92636	917 aa		13.45	□□□□□ -0.26
CCM2-215	ENST00000482714		Q96MT0	163 aa		13.45	□□□□□ -0.26
CCM2-215	ENST00000482714	DACH2	Q96NX9	599 aa		13.45	□□□□□ -0.26
CCM2-215	ENST00000482714	SPOCK3	Q9BQ16	436 aa		13.45	□□□□□ -0.26
CCM2-215	ENST00000482714	NGB	Q9NPG2	151 aa		13.45	□□□□□ -0.26
CCM2-215	ENST00000482714	SLC17A5	Q9NRA2	495 aa		13.45	□□□□□ -0.26
CCM2-215	ENST00000482714	KCNG2	Q9UJ96	466 aa		13.45	□□□□□ -0.26
CCM2-215	ENST00000482714	COA3	Q9Y2R0	106 aa	Predicted RBP	13.45	□□□□□ -0.26
CCM2-215	ENST00000482714	CACNA1C	Q13936	2221 aa		13.45	□□□□□ -0.26
CCM2-215	ENST00000482714	USP9Y	O00507	2555 aa	Predicted RBP	13.44	□□□□□ -0.26
CCM2-215	ENST00000482714	TUBAL3	A6NHL2	446 aa		13.44	□□□□□ -0.26
CCM2-215	ENST00000482714	DCTN6	O00399	190 aa		13.44	□□□□□ -0.26
CCM2-215	ENST00000482714	PRKY	O43930	277 aa		13.44	□□□□□ -0.26
CCM2-215	ENST00000482714	RAD51D	O75771	328 aa		13.44	□□□□□ -0.26
CCM2-215	ENST00000482714	GLCE	O94923	617 aa		13.44	□□□□□ -0.26
CCM2-215	ENST00000482714	SPI1	P17947	270 aa		13.44	□□□□□ -0.26
CCM2-215	ENST00000482714	IGFBP2	P18065	325 aa		13.44	□□□□□ -0.26
CCM2-215	ENST00000482714	MSR1	P21757	451 aa		13.44	□□□□□ -0.26
CCM2-215	ENST00000482714	FMO3	P31513	532 aa		13.44	□□□□□ -0.26
CCM2-215	ENST00000482714	CAPG	P40121	348 aa		13.44	□□□□□ -0.26
CCM2-215	ENST00000482714	UBE2N	P61088	152 aa	Known RBP	13.44	□□□□□ -0.26
CCM2-215	ENST00000482714	PCBD1	P61457	104 aa		13.44	□□□□□ -0.26
CCM2-215	ENST00000482714	ETFDH	Q16134	617 aa		13.44	□□□□□ -0.26
CCM2-215	ENST00000482714	OCLN	Q16625	522 aa		13.44	□□□□□ -0.26
CCM2-215	ENST00000482714	TBRG1	Q3YBR2	411 aa		13.44	□□□□□ -0.26
CCM2-215	ENST00000482714	AADACL4	Q5VUY2	407 aa		13.44	□□□□□ -0.26
CCM2-215	ENST00000482714	PLBD1	Q6P4A8	553 aa		13.44	□□□□□ -0.26
CCM2-215	ENST00000482714	GID4	Q8IVV7	300 aa		13.44	□□□□□ -0.26
CCM2-215	ENST00000482714	FAM81A	Q8TBF8	368 aa		13.44	□□□□□ -0.26
CCM2-215	ENST00000482714	NANOS1	Q8WY41	292 aa	Known RBP	13.44	□□□□□ -0.26
CCM2-215	ENST00000482714	RFK	Q969G6	155 aa		13.44	□□□□□ -0.26
CCM2-215	ENST00000482714	S100PBP	Q96BU1	408 aa		13.44	□□□□□ -0.26
CCM2-215	ENST00000482714	TSSK2	Q96PF2	358 aa		13.44	□□□□□ -0.26
CCM2-215	ENST00000482714	ACTR6	Q9GZN1	396 aa		13.44	□□□□□ -0.26
CCM2-215	ENST00000482714	SEC61A2	Q9H9S3	476 aa		13.44	□□□□□ -0.26
CCM2-215	ENST00000482714	HINT3	Q9NQE9	182 aa	Known RBP	13.44	□□□□□ -0.26
CCM2-215	ENST00000482714	POLE4	Q9NR33	117 aa		13.44	□□□□□ -0.26
CCM2-215	ENST00000482714	HAO2	Q9NYQ3	351 aa		13.44	□□□□□ -0.26
CCM2-215	ENST00000482714	FBXL3	Q9UKT7	428 aa		13.44	□□□□□ -0.26
CCM2-215	ENST00000482714	C12orf71	A8MTZ7	269 aa		13.43	□□□□□ -0.26
CCM2-215	ENST00000482714	TMCC2	O75069	709 aa		13.43	□□□□□ -0.26
CCM2-215	ENST00000482714	CST2	P09228	141 aa		13.43	□□□□□ -0.26
CCM2-215	ENST00000482714	RNF224	P0DH78	156 aa		13.43	□□□□□ -0.26
CCM2-215	ENST00000482714	SGCA	Q16586	387 aa		13.43	□□□□□ -0.26
CCM2-215	ENST00000482714	C3orf36	Q3SXR2	165 aa		13.43	□□□□□ -0.26
CCM2-215	ENST00000482714	SLC36A2	Q495M3	483 aa		13.43	□□□□□ -0.26
CCM2-215	ENST00000482714	TEX30	Q5JUR7	227 aa		13.43	□□□□□ -0.26
CCM2-215	ENST00000482714	LINC01590	Q5TEZ4	76 aa		13.43	□□□□□ -0.26
CCM2-215	ENST00000482714	C9orf135	Q5VTT2	229 aa		13.43	□□□□□ -0.26
CCM2-215	ENST00000482714	KLHL24	Q6TFL4	600 aa		13.43	□□□□□ -0.26
CCM2-215	ENST00000482714	DMRTC2	Q8IXT2	367 aa	Predicted RBP	13.43	□□□□□ -0.26
CCM2-215	ENST00000482714	PROKR2	Q8NFJ6	384 aa		13.43	□□□□□ -0.26
CCM2-215	ENST00000482714	CYGB	Q8WWM9	190 aa		13.43	□□□□□ -0.26

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