RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 SH2D2AQ9NP31 389 aa13.75□□□□□ -0.21
RPUSD3-215ENST00000475470 A0A0G2JMP0 313 aa13.75□□□□□ -0.21
RPUSD3-215ENST00000475470 A0A0X1KG70 313 aa13.75□□□□□ -0.21
RPUSD3-215ENST00000475470 FZD7O75084 574 aa13.75□□□□□ -0.21
RPUSD3-215ENST00000475470 HPP00738 406 aa13.75□□□□□ -0.21
RPUSD3-215ENST00000475470 SNRPBP14678 240 aaKnown RBP13.75□□□□□ -0.21
RPUSD3-215ENST00000475470 LIFP15018 202 aa13.75□□□□□ -0.21
RPUSD3-215ENST00000475470 RBMS1P29558 406 aaKnown RBP13.75□□□□□ -0.21
RPUSD3-215ENST00000475470 INPP1P49441 399 aa13.75□□□□□ -0.21
RPUSD3-215ENST00000475470 ROM1Q03395 351 aa13.75□□□□□ -0.21
RPUSD3-215ENST00000475470 CARTPTQ16568 116 aa13.75□□□□□ -0.21
RPUSD3-215ENST00000475470 ODF4Q2M2E3 257 aa13.75□□□□□ -0.21
RPUSD3-215ENST00000475470 ARMC10Q8N2F6 343 aa13.75□□□□□ -0.21
RPUSD3-215ENST00000475470 PRSS35Q8N3Z0 413 aa13.75□□□□□ -0.21
RPUSD3-215ENST00000475470 GTPBP8Q8N3Z3 284 aaPredicted RBP13.75□□□□□ -0.21
RPUSD3-215ENST00000475470 ZNF433Q8N7K0 673 aaPredicted RBP13.75□□□□□ -0.21
RPUSD3-215ENST00000475470 CELF2-AS1Q8N7Q2 184 aa13.75□□□□□ -0.21
RPUSD3-215ENST00000475470 DTX3Q8N9I9 347 aa13.75□□□□□ -0.21
RPUSD3-215ENST00000475470 SLC26A10Q8NG04 563 aa13.75□□□□□ -0.21
RPUSD3-215ENST00000475470 OR4M2Q8NGB6 313 aa13.75□□□□□ -0.21
RPUSD3-215ENST00000475470 RBP7Q96R05 134 aa13.75□□□□□ -0.21
RPUSD3-215ENST00000475470 PROK2Q9HC23 129 aa13.75□□□□□ -0.21
RPUSD3-215ENST00000475470 TCF7L1Q9HCS4 588 aa13.75□□□□□ -0.21
RPUSD3-215ENST00000475470 GPR179Q6PRD1 2367 aa13.75□□□□□ -0.21
RPUSD3-215ENST00000475470 SULT2B1O00204 365 aa13.74□□□□□ -0.21
RPUSD3-215ENST00000475470 ZNF806P0C7X5 589 aa13.74□□□□□ -0.21
RPUSD3-215ENST00000475470 PTGS2P35354 604 aa13.74□□□□□ -0.21
RPUSD3-215ENST00000475470 PITPNBP48739 271 aa13.74□□□□□ -0.21
RPUSD3-215ENST00000475470 DSCR4P56555 118 aaPredicted RBP13.74□□□□□ -0.21
RPUSD3-215ENST00000475470 TMEM164Q5U3C3 297 aa13.74□□□□□ -0.21
RPUSD3-215ENST00000475470 ZNF468Q5VIY5 522 aaPredicted RBP13.74□□□□□ -0.21
RPUSD3-215ENST00000475470 CDCP2Q5VXM1 449 aa13.74□□□□□ -0.21
RPUSD3-215ENST00000475470 OR5H6Q8NGV6 325 aa13.74□□□□□ -0.21
RPUSD3-215ENST00000475470 ZNF671Q8TAW3 534 aa13.74□□□□□ -0.21
RPUSD3-215ENST00000475470 SGCZQ96LD1 299 aa13.74□□□□□ -0.21
RPUSD3-215ENST00000475470 C4orf45Q96LM5 186 aa13.74□□□□□ -0.21
RPUSD3-215ENST00000475470 EDEM2Q9BV94 578 aa13.74□□□□□ -0.21
RPUSD3-215ENST00000475470 C11orf54Q9H0W9 315 aaPredicted RBP13.74□□□□□ -0.21
RPUSD3-215ENST00000475470 TMEM165Q9HC07 324 aa13.74□□□□□ -0.21
RPUSD3-215ENST00000475470 ANKRD10Q9NXR5 420 aa13.74□□□□□ -0.21
RPUSD3-215ENST00000475470 DKKL1Q9UK85 242 aa13.74□□□□□ -0.21
RPUSD3-215ENST00000475470 CLEC4AQ9UMR7 237 aa13.74□□□□□ -0.21
RPUSD3-215ENST00000475470 GTF2A1LQ9UNN4 478 aa13.74□□□□□ -0.21
RPUSD3-215ENST00000475470 A0A0B4J203 849 aa13.74□□□□□ -0.21
RPUSD3-215ENST00000475470 TRBV5-5A0A0J9YX44 114 aa13.74□□□□□ -0.21
RPUSD3-215ENST00000475470 A0A1B0GVC2 190 aa13.74□□□□□ -0.21
RPUSD3-215ENST00000475470 A6NIN4 97 aa13.74□□□□□ -0.21
RPUSD3-215ENST00000475470 RIDAP52758 137 aaKnown RBP13.74□□□□□ -0.21
RPUSD3-215ENST00000475470 Q0VFX4 171 aa13.74□□□□□ -0.21
RPUSD3-215ENST00000475470 WDR38Q5JTN6 314 aa13.74□□□□□ -0.21
RPUSD3-215ENST00000475470 ZNF544Q6NX49 715 aa13.74□□□□□ -0.21
RPUSD3-215ENST00000475470 FDX2Q6P4F2 183 aa13.74□□□□□ -0.21
RPUSD3-215ENST00000475470 RDH10Q8IZV5 341 aa13.74□□□□□ -0.21
RPUSD3-215ENST00000475470 OR52N5Q8NH56 324 aa13.74□□□□□ -0.21
RPUSD3-215ENST00000475470 GPR148Q8TDV2 347 aa13.74□□□□□ -0.21
RPUSD3-215ENST00000475470 RNF128Q8TEB7 428 aa13.74□□□□□ -0.21
RPUSD3-215ENST00000475470 CDC6Q99741 560 aa13.74□□□□□ -0.21
RPUSD3-215ENST00000475470 SPRY4Q9C004 299 aa13.74□□□□□ -0.21
RPUSD3-215ENST00000475470 TMEM9BQ9NQ34 198 aa13.74□□□□□ -0.21
RPUSD3-215ENST00000475470 IGKV1D-43A0A0B4J1Z2 117 aa13.73□□□□□ -0.21
RPUSD3-215ENST00000475470 TRABD2BA6NFA1 517 aa13.73□□□□□ -0.21
RPUSD3-215ENST00000475470 ZNF254O75437 659 aa13.73□□□□□ -0.21
RPUSD3-215ENST00000475470 MT-CO3P00414 261 aa13.73□□□□□ -0.21
RPUSD3-215ENST00000475470 HLA-DQB1P01920 261 aa13.73□□□□□ -0.21
RPUSD3-215ENST00000475470 KIR3DL2P43630 455 aa13.73□□□□□ -0.21
RPUSD3-215ENST00000475470 P2RY4P51582 365 aa13.73□□□□□ -0.21
RPUSD3-215ENST00000475470 CLRN1P58418 232 aa13.73□□□□□ -0.21
RPUSD3-215ENST00000475470 SLC35A1P78382 337 aa13.73□□□□□ -0.21
RPUSD3-215ENST00000475470 CHAF1BQ13112 559 aa13.73□□□□□ -0.21
RPUSD3-215ENST00000475470 RAET1LQ5VY80 246 aa13.73□□□□□ -0.21
RPUSD3-215ENST00000475470 TIGD3Q6B0B8 471 aa13.73□□□□□ -0.21
RPUSD3-215ENST00000475470 OR7E24Q6IFN5 339 aa13.73□□□□□ -0.21
RPUSD3-215ENST00000475470 MDGA2Q7Z553 956 aa13.73□□□□□ -0.21
RPUSD3-215ENST00000475470 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.73□□□□□ -0.21
RPUSD3-215ENST00000475470 RYDENQ9NUL5 291 aaKnown RBP13.73□□□□□ -0.21
RPUSD3-215ENST00000475470 P4HTMQ9NXG6 502 aa13.73□□□□□ -0.21
RPUSD3-215ENST00000475470 FOXJ2Q9P0K8 574 aa13.73□□□□□ -0.21
RPUSD3-215ENST00000475470 V9GY05 133 aa13.73□□□□□ -0.21
RPUSD3-215ENST00000475470 FREM3P0C091 2139 aa13.73□□□□□ -0.21
RPUSD3-215ENST00000475470 CCDC187A0A096LP49 1063 aa13.73□□□□□ -0.21
RPUSD3-215ENST00000475470 PLA2G10O15496 165 aa13.73□□□□□ -0.21
RPUSD3-215ENST00000475470 CCR9P51686 369 aa13.73□□□□□ -0.21
RPUSD3-215ENST00000475470 TEX30Q5JUR7 227 aa13.73□□□□□ -0.21
RPUSD3-215ENST00000475470 HES5Q5TA89 166 aa13.73□□□□□ -0.21
RPUSD3-215ENST00000475470 B3GNTL1Q67FW5 361 aaPredicted RBP13.73□□□□□ -0.21
RPUSD3-215ENST00000475470 NHLRC1Q6VVB1 395 aa13.73□□□□□ -0.21
RPUSD3-215ENST00000475470 TMPPEQ6ZT21 453 aa13.73□□□□□ -0.21
RPUSD3-215ENST00000475470 NCCRP1Q6ZVX7 275 aaPredicted RBP13.73□□□□□ -0.21
RPUSD3-215ENST00000475470 GLB1L2Q8IW92 636 aa13.73□□□□□ -0.21
RPUSD3-215ENST00000475470 UBE2J2Q8N2K1 259 aa13.73□□□□□ -0.21
RPUSD3-215ENST00000475470 MIB2Q96AX9 1013 aa13.73□□□□□ -0.21
RPUSD3-215ENST00000475470 ITPKCQ96DU7 683 aa13.73□□□□□ -0.21
RPUSD3-215ENST00000475470 OXGR1Q96P68 337 aa13.73□□□□□ -0.21
RPUSD3-215ENST00000475470 GFI1Q99684 422 aa13.73□□□□□ -0.21
RPUSD3-215ENST00000475470 KCNJ15Q99712 375 aa13.73□□□□□ -0.21
RPUSD3-215ENST00000475470 HDHD2Q9H0R4 259 aa13.73□□□□□ -0.21
RPUSD3-215ENST00000475470 KLHL9Q9P2J3 617 aa13.73□□□□□ -0.21
RPUSD3-215ENST00000475470 SPATA2Q9UM82 520 aa13.73□□□□□ -0.21
RPUSD3-215ENST00000475470 LRP12Q9Y561 859 aa13.73□□□□□ -0.21
RPUSD3-215ENST00000475470 CACNA1CQ13936 2221 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms