RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 HDAC2Q92769 488 aaKnown RBP19.29■□□□□ 0.68
C9orf3-213ENST00000471978 TSPAN32Q96QS1 320 aa19.29■□□□□ 0.68
C9orf3-213ENST00000471978 BCL2L14Q9BZR8 327 aa19.29■□□□□ 0.68
C9orf3-213ENST00000471978 TXNIPQ9H3M7 391 aa19.29■□□□□ 0.68
C9orf3-213ENST00000471978 SMURF2Q9HAU4 748 aa19.29■□□□□ 0.68
C9orf3-213ENST00000471978 HINT3Q9NQE9 182 aaKnown RBP19.29■□□□□ 0.68
C9orf3-213ENST00000471978 SLCO1C1Q9NYB5 712 aa19.29■□□□□ 0.68
C9orf3-213ENST00000471978 A4GNTQ9UNA3 340 aa19.29■□□□□ 0.68
C9orf3-213ENST00000471978 UGT2A1Q9Y4X1 527 aa19.29■□□□□ 0.68
C9orf3-213ENST00000471978 CAPN7Q9Y6W3 813 aa19.29■□□□□ 0.68
C9orf3-213ENST00000471978 IGLV3-9A0A075B6K5 115 aa19.28■□□□□ 0.68
C9orf3-213ENST00000471978 ELOVL7A1L3X0 281 aa19.28■□□□□ 0.68
C9orf3-213ENST00000471978 NPIPB13A6NJU9 1138 aa19.28■□□□□ 0.68
C9orf3-213ENST00000471978 C17orf100A8MU93 164 aa19.28■□□□□ 0.68
C9orf3-213ENST00000471978 B4DSR2 109 aa19.28■□□□□ 0.68
C9orf3-213ENST00000471978 NPIPB4C9JG80 1138 aa19.28■□□□□ 0.68
C9orf3-213ENST00000471978 SAGP10523 405 aaPredicted RBP19.28■□□□□ 0.68
C9orf3-213ENST00000471978 IFI30P13284 250 aa19.28■□□□□ 0.68
C9orf3-213ENST00000471978 IFNA8P32881 189 aa19.28■□□□□ 0.68
C9orf3-213ENST00000471978 SRP14P37108 136 aaKnown RBP19.28■□□□□ 0.68
C9orf3-213ENST00000471978 MAGEB1P43366 347 aa19.28■□□□□ 0.68
C9orf3-213ENST00000471978 DVL1P1P54792 670 aaPredicted RBP19.28■□□□□ 0.68
C9orf3-213ENST00000471978 FMODQ06828 376 aa19.28■□□□□ 0.68
C9orf3-213ENST00000471978 CD47Q08722 323 aa19.28■□□□□ 0.68
C9orf3-213ENST00000471978 TOP3AQ13472 1001 aaPredicted RBP19.28■□□□□ 0.68
C9orf3-213ENST00000471978 PABPC1L2AQ5JQF8 200 aa19.28■□□□□ 0.68
C9orf3-213ENST00000471978 CPEB3Q8NE35 698 aaKnown RBP19.28■□□□□ 0.68
C9orf3-213ENST00000471978 CLDND2Q8NHS1 167 aa19.28■□□□□ 0.68
C9orf3-213ENST00000471978 SNX33Q8WV41 574 aa19.28■□□□□ 0.68
C9orf3-213ENST00000471978 NSMAFQ92636 917 aa19.28■□□□□ 0.68
C9orf3-213ENST00000471978 RCN3Q96D15 328 aa19.28■□□□□ 0.68
C9orf3-213ENST00000471978 NMD3Q96D46 503 aaKnown RBP19.28■□□□□ 0.68
C9orf3-213ENST00000471978 BPIFA2Q96DR5 249 aa19.28■□□□□ 0.68
C9orf3-213ENST00000471978 PRRC1Q96M27 445 aa19.28■□□□□ 0.68
C9orf3-213ENST00000471978 CCNB1IP1Q9NPC3 277 aa19.28■□□□□ 0.68
C9orf3-213ENST00000471978 HIF3AQ9Y2N7 669 aa19.28■□□□□ 0.68
C9orf3-213ENST00000471978 IGKV1D-43A0A0B4J1Z2 117 aa19.27■□□□□ 0.68
C9orf3-213ENST00000471978 PPIHO43447 177 aaKnown RBP19.27■□□□□ 0.68
C9orf3-213ENST00000471978 NR2C1P13056 603 aa19.27■□□□□ 0.68
C9orf3-213ENST00000471978 CCNOP22674 350 aa19.27■□□□□ 0.68
C9orf3-213ENST00000471978 TAF11Q15544 211 aa19.27■□□□□ 0.68
C9orf3-213ENST00000471978 SGCAQ16586 387 aa19.27■□□□□ 0.68
C9orf3-213ENST00000471978 LZICQ8WZA0 190 aa19.27■□□□□ 0.68
C9orf3-213ENST00000471978 NABP1Q96AH0 204 aa19.27■□□□□ 0.68
C9orf3-213ENST00000471978 C19orf24Q9BVV8 132 aa19.27■□□□□ 0.68
C9orf3-213ENST00000471978 ZNF416Q9BWM5 594 aa19.27■□□□□ 0.68
C9orf3-213ENST00000471978 RACGAP1Q9H0H5 632 aa19.27■□□□□ 0.68
C9orf3-213ENST00000471978 ARMCX1Q9P291 453 aa19.27■□□□□ 0.68
C9orf3-213ENST00000471978 ANK2Q01484 3957 aa19.27■□□□□ 0.67
C9orf3-213ENST00000471978 HTR3EA5X5Y0 456 aa19.26■□□□□ 0.67
C9orf3-213ENST00000471978 WNT9BO14905 357 aa19.26■□□□□ 0.67
C9orf3-213ENST00000471978 RP2O75695 350 aa19.26■□□□□ 0.67
C9orf3-213ENST00000471978 ZNF32P17041 273 aa19.26■□□□□ 0.67
C9orf3-213ENST00000471978 PCMT1P22061 227 aa19.26■□□□□ 0.67
C9orf3-213ENST00000471978 STOMP27105 288 aa19.26■□□□□ 0.67
C9orf3-213ENST00000471978 YAP1P46937 504 aaKnown RBP19.26■□□□□ 0.67
C9orf3-213ENST00000471978 CCL8P80075 99 aa19.26■□□□□ 0.67
C9orf3-213ENST00000471978 PCGF3Q3KNV8 242 aa19.26■□□□□ 0.67
C9orf3-213ENST00000471978 SLC25A47Q6Q0C1 308 aa19.26■□□□□ 0.67
C9orf3-213ENST00000471978 GLCCI1Q86VQ1 547 aa19.26■□□□□ 0.67
C9orf3-213ENST00000471978 POU5F2Q8N7G0 328 aa19.26■□□□□ 0.67
C9orf3-213ENST00000471978 OR1J1Q8NGS3 322 aa19.26■□□□□ 0.67
C9orf3-213ENST00000471978 ALG12Q9BV10 488 aa19.26■□□□□ 0.67
C9orf3-213ENST00000471978 CMTM6Q9NX76 183 aa19.26■□□□□ 0.67
C9orf3-213ENST00000471978 AP3M1Q9Y2T2 418 aa19.26■□□□□ 0.67
C9orf3-213ENST00000471978 GMNCA6NCL1 334 aa19.25■□□□□ 0.67
C9orf3-213ENST00000471978 SLC22A2O15244 555 aa19.25■□□□□ 0.67
C9orf3-213ENST00000471978 CDC14BO60729 498 aa19.25■□□□□ 0.67
C9orf3-213ENST00000471978 TFP02787 698 aa19.25■□□□□ 0.67
C9orf3-213ENST00000471978 MAKP20794 623 aa19.25■□□□□ 0.67
C9orf3-213ENST00000471978 DRD4P21917 467 aa19.25■□□□□ 0.67
C9orf3-213ENST00000471978 FUT4P22083 530 aa19.25■□□□□ 0.67
C9orf3-213ENST00000471978 RPL27P61353 136 aaKnown RBP19.25■□□□□ 0.67
C9orf3-213ENST00000471978 GUCY1A3Q02108 690 aa19.25■□□□□ 0.67
C9orf3-213ENST00000471978 MOGQ16653 247 aa19.25■□□□□ 0.67
C9orf3-213ENST00000471978 THEM4Q5T1C6 240 aa19.25■□□□□ 0.67
C9orf3-213ENST00000471978 LIPNQ5VXI9 398 aa19.25■□□□□ 0.67
C9orf3-213ENST00000471978 RINLQ6ZS11 566 aa19.25■□□□□ 0.67
C9orf3-213ENST00000471978 VTCN1Q7Z7D3 282 aa19.25■□□□□ 0.67
C9orf3-213ENST00000471978 IGFN1Q86VF2 1251 aa19.25■□□□□ 0.67
C9orf3-213ENST00000471978 RBP7Q96R05 134 aa19.25■□□□□ 0.67
C9orf3-213ENST00000471978 FNDC11Q9BVV2 318 aa19.25■□□□□ 0.67
C9orf3-213ENST00000471978 TREM2Q9NZC2 230 aa19.25■□□□□ 0.67
C9orf3-213ENST00000471978 GMPR2Q9P2T1 348 aaKnown RBP19.25■□□□□ 0.67
C9orf3-213ENST00000471978 RHCGQ9UBD6 479 aa19.25■□□□□ 0.67
C9orf3-213ENST00000471978 SNX13Q9Y5W8 968 aa19.25■□□□□ 0.67
C9orf3-213ENST00000471978 FAM157AC9JC47 383 aa19.24■□□□□ 0.67
C9orf3-213ENST00000471978 IGHMP01871 453 aa19.24■□□□□ 0.67
C9orf3-213ENST00000471978 IFNW1P05000 195 aa19.24■□□□□ 0.67
C9orf3-213ENST00000471978 CTXN1P60606 82 aa19.24■□□□□ 0.67
C9orf3-213ENST00000471978 ERVK-25P63136 954 aa19.24■□□□□ 0.67
C9orf3-213ENST00000471978 GLO1Q04760 184 aa19.24■□□□□ 0.67
C9orf3-213ENST00000471978 FAM27BQ5VT28 67 aa19.24■□□□□ 0.67
C9orf3-213ENST00000471978 ARPINQ7Z6K5 226 aa19.24■□□□□ 0.67
C9orf3-213ENST00000471978 MEX3DQ86XN8 651 aaKnown RBP19.24■□□□□ 0.67
C9orf3-213ENST00000471978 NRMQ8IXM6 262 aa19.24■□□□□ 0.67
C9orf3-213ENST00000471978 OFCC1Q8IZS5 231 aa19.24■□□□□ 0.67
C9orf3-213ENST00000471978 CLDN22Q8N7P3 220 aa19.24■□□□□ 0.67
C9orf3-213ENST00000471978 OR51A7Q8NH64 312 aa19.24■□□□□ 0.67
C9orf3-213ENST00000471978 AKR7LQ8NHP1 331 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms