RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 SLC30A7Q8NEW0 376 aa12.11□□□□□ -0.47
COMMD3-208ENST00000470045 OR51A7Q8NH64 312 aa12.11□□□□□ -0.47
COMMD3-208ENST00000470045 LRRC37BQ96QE4 947 aa12.11□□□□□ -0.47
COMMD3-208ENST00000470045 TNFRSF13CQ96RJ3 184 aa12.11□□□□□ -0.47
COMMD3-208ENST00000470045 FUZQ9BT04 418 aa12.11□□□□□ -0.47
COMMD3-208ENST00000470045 MRPL37Q9BZE1 423 aaKnown RBP12.11□□□□□ -0.47
COMMD3-208ENST00000470045 SIAEQ9HAT2 523 aa12.11□□□□□ -0.47
COMMD3-208ENST00000470045 TMEM5Q9Y2B1 443 aa12.11□□□□□ -0.47
COMMD3-208ENST00000470045 A6NIZ1 184 aa12.1□□□□□ -0.47
COMMD3-208ENST00000470045 CDAP32320 146 aa12.1□□□□□ -0.47
COMMD3-208ENST00000470045 RAP1BP61224 184 aa12.1□□□□□ -0.47
COMMD3-208ENST00000470045 RAP1AP62834 184 aa12.1□□□□□ -0.47
COMMD3-208ENST00000470045 GALK2Q01415 458 aa12.1□□□□□ -0.47
COMMD3-208ENST00000470045 TMEM249Q2WGJ8 235 aa12.1□□□□□ -0.47
COMMD3-208ENST00000470045 SPATS1Q496A3 300 aa12.1□□□□□ -0.47
COMMD3-208ENST00000470045 ZBED5Q49AG3 693 aa12.1□□□□□ -0.47
COMMD3-208ENST00000470045 SAMD4BQ5PRF9 694 aaKnown RBP12.1□□□□□ -0.47
COMMD3-208ENST00000470045 THEM4Q5T1C6 240 aa12.1□□□□□ -0.47
COMMD3-208ENST00000470045 PODNL1Q6PEZ8 512 aa12.1□□□□□ -0.47
COMMD3-208ENST00000470045 FAM122BQ7Z309 247 aa12.1□□□□□ -0.47
COMMD3-208ENST00000470045 PAQR4Q8N4S7 273 aaPredicted RBP12.1□□□□□ -0.47
COMMD3-208ENST00000470045 CLDN22Q8N7P3 220 aa12.1□□□□□ -0.47
COMMD3-208ENST00000470045 ARIH2OSQ8N7S6 290 aa12.1□□□□□ -0.47
COMMD3-208ENST00000470045 NEU4Q8WWR8 484 aaPredicted RBP12.1□□□□□ -0.47
COMMD3-208ENST00000470045 RAB1BQ9H0U4 201 aa12.1□□□□□ -0.47
COMMD3-208ENST00000470045 RNF121Q9H920 327 aa12.1□□□□□ -0.47
COMMD3-208ENST00000470045 SIGLEC7Q9Y286 467 aa12.1□□□□□ -0.47
COMMD3-208ENST00000470045 ABCA2Q9BZC7 2435 aa12.1□□□□□ -0.47
COMMD3-208ENST00000470045 RTTNQ86VV8 2226 aa12.1□□□□□ -0.47
COMMD3-208ENST00000470045 TRBV4-1A0A0J9YWV2 114 aa12.09□□□□□ -0.47
COMMD3-208ENST00000470045 LOC390937A0A1W2PQ73 354 aa12.09□□□□□ -0.47
COMMD3-208ENST00000470045 SLC22A23A1A5C7 686 aa12.09□□□□□ -0.47
COMMD3-208ENST00000470045 ARPC2O15144 300 aa12.09□□□□□ -0.47
COMMD3-208ENST00000470045 SYNGR3O43761 229 aa12.09□□□□□ -0.47
COMMD3-208ENST00000470045 CRLF1O75462 422 aa12.09□□□□□ -0.47
COMMD3-208ENST00000470045 GMNNO75496 209 aa12.09□□□□□ -0.47
COMMD3-208ENST00000470045 PTHP01270 115 aa12.09□□□□□ -0.47
COMMD3-208ENST00000470045 TP53P04637 393 aaPredicted RBP12.09□□□□□ -0.47
COMMD3-208ENST00000470045 CD14P08571 375 aa12.09□□□□□ -0.47
COMMD3-208ENST00000470045 TCN1P20061 433 aaPredicted RBP12.09□□□□□ -0.47
COMMD3-208ENST00000470045 USF1P22415 310 aaPredicted RBP12.09□□□□□ -0.47
COMMD3-208ENST00000470045 NR4A2P43354 598 aa12.09□□□□□ -0.47
COMMD3-208ENST00000470045 OMPP47874 163 aa12.09□□□□□ -0.47
COMMD3-208ENST00000470045 FGD3Q5JSP0 725 aa12.09□□□□□ -0.47
COMMD3-208ENST00000470045 FAM27BQ5VT28 67 aa12.09□□□□□ -0.47
COMMD3-208ENST00000470045 RRM2BQ7LG56 351 aa12.09□□□□□ -0.47
COMMD3-208ENST00000470045 ZCCHC24Q8N2G6 241 aaKnown RBP12.09□□□□□ -0.47
COMMD3-208ENST00000470045 LRRC18Q8N456 261 aa12.09□□□□□ -0.47
COMMD3-208ENST00000470045 PYURFQ96I23 114 aa12.09□□□□□ -0.47
COMMD3-208ENST00000470045 FAM46AQ96IP4 442 aaKnown RBP12.09□□□□□ -0.47
COMMD3-208ENST00000470045 RBP7Q96R05 134 aa12.09□□□□□ -0.47
COMMD3-208ENST00000470045 GPX7Q96SL4 187 aaPredicted RBP12.09□□□□□ -0.47
COMMD3-208ENST00000470045 PIMREGQ9BSJ6 248 aa12.09□□□□□ -0.47
COMMD3-208ENST00000470045 DYNLRB1Q9NP97 96 aa12.09□□□□□ -0.47
COMMD3-208ENST00000470045 NDE1Q9NXR1 346 aa12.09□□□□□ -0.47
COMMD3-208ENST00000470045 ADAM18Q9Y3Q7 739 aa12.09□□□□□ -0.47
COMMD3-208ENST00000470045 FAM32AQ9Y421 112 aaKnown RBP12.09□□□□□ -0.47
COMMD3-208ENST00000470045 JMJD1CQ15652 2540 aa12.09□□□□□ -0.47
COMMD3-208ENST00000470045 ANK3Q12955 4377 aaKnown RBP12.08□□□□□ -0.48
COMMD3-208ENST00000470045 IQCMA0A1B0GVH7 501 aa12.08□□□□□ -0.48
COMMD3-208ENST00000470045 M0R233 179 aa12.08□□□□□ -0.48
COMMD3-208ENST00000470045 PTP4A3O75365 173 aa12.08□□□□□ -0.48
COMMD3-208ENST00000470045 DIRAS1O95057 198 aa12.08□□□□□ -0.48
COMMD3-208ENST00000470045 ERCC1P07992 297 aaPredicted RBP12.08□□□□□ -0.48
COMMD3-208ENST00000470045 CCL2P13500 99 aa12.08□□□□□ -0.48
COMMD3-208ENST00000470045 ZNF32P17041 273 aa12.08□□□□□ -0.48
COMMD3-208ENST00000470045 ITGA2P17301 1181 aa12.08□□□□□ -0.48
COMMD3-208ENST00000470045 GIFP27352 417 aa12.08□□□□□ -0.48
COMMD3-208ENST00000470045 FXYD6P3P58550 94 aa12.08□□□□□ -0.48
COMMD3-208ENST00000470045 ERVK-25P63136 954 aa12.08□□□□□ -0.48
COMMD3-208ENST00000470045 PLP2Q04941 152 aa12.08□□□□□ -0.48
COMMD3-208ENST00000470045 SEC23BQ15437 767 aa12.08□□□□□ -0.48
COMMD3-208ENST00000470045 TBC1D28Q2M2D7 210 aa12.08□□□□□ -0.48
COMMD3-208ENST00000470045 MESTQ5EB52 335 aa12.08□□□□□ -0.48
COMMD3-208ENST00000470045 PABPC1L2AQ5JQF8 200 aa12.08□□□□□ -0.48
COMMD3-208ENST00000470045 C6orf52Q5T4I8 152 aa12.08□□□□□ -0.48
COMMD3-208ENST00000470045 GKAP1Q5VSY0 366 aaPredicted RBP12.08□□□□□ -0.48
COMMD3-208ENST00000470045 C16orf89Q6UX73 402 aa12.08□□□□□ -0.48
COMMD3-208ENST00000470045 PRIMA1Q86XR5 153 aa12.08□□□□□ -0.48
COMMD3-208ENST00000470045 CPEB3Q8NE35 698 aaKnown RBP12.08□□□□□ -0.48
COMMD3-208ENST00000470045 OR1J2Q8NGS2 313 aa12.08□□□□□ -0.48
COMMD3-208ENST00000470045 NSMAFQ92636 917 aa12.08□□□□□ -0.48
COMMD3-208ENST00000470045 CDRT15Q96T59 188 aa12.08□□□□□ -0.48
COMMD3-208ENST00000470045 SYT3Q9BQG1 590 aa12.08□□□□□ -0.48
COMMD3-208ENST00000470045 CDH20Q9HBT6 801 aa12.08□□□□□ -0.48
COMMD3-208ENST00000470045 NRIP3Q9NQ35 241 aa12.08□□□□□ -0.48
COMMD3-208ENST00000470045 MYEF2Q9P2K5 600 aaKnown RBP12.08□□□□□ -0.48
COMMD3-208ENST00000470045 IGLV3-9A0A075B6K5 115 aa12.07□□□□□ -0.48
COMMD3-208ENST00000470045 SH3PXD2BA1X283 911 aa12.07□□□□□ -0.48
COMMD3-208ENST00000470045 AHCYL1O43865 530 aa12.07□□□□□ -0.48
COMMD3-208ENST00000470045 ICMTO60725 284 aa12.07□□□□□ -0.48
COMMD3-208ENST00000470045 NDUFB2O95178 105 aa12.07□□□□□ -0.48
COMMD3-208ENST00000470045 STAMBPO95630 424 aa12.07□□□□□ -0.48
COMMD3-208ENST00000470045 ADRA2AP08913 450 aa12.07□□□□□ -0.48
COMMD3-208ENST00000470045 CST2P09228 141 aa12.07□□□□□ -0.48
COMMD3-208ENST00000470045 DAOP14920 347 aa12.07□□□□□ -0.48
COMMD3-208ENST00000470045 ZNF250P15622 560 aa12.07□□□□□ -0.48
COMMD3-208ENST00000470045 APEX1P27695 318 aaKnown RBP12.07□□□□□ -0.48
COMMD3-208ENST00000470045 MSX2P35548 267 aaPredicted RBP12.07□□□□□ -0.48
COMMD3-208ENST00000470045 RPL4P36578 427 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms