RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 ZNF823P16415 610 aa12.85□□□□□ -0.35
CDK3-201ENST00000425876 NME2P22392 152 aa12.85□□□□□ -0.35
CDK3-201ENST00000425876 CFL1P23528 166 aaKnown RBP12.85□□□□□ -0.35
CDK3-201ENST00000425876 CLRN1P58418 232 aa12.85□□□□□ -0.35
CDK3-201ENST00000425876 ADAM8P78325 824 aa12.85□□□□□ -0.35
CDK3-201ENST00000425876 MXD1Q05195 221 aa12.85□□□□□ -0.35
CDK3-201ENST00000425876 FMODQ06828 376 aa12.85□□□□□ -0.35
CDK3-201ENST00000425876 INAQ16352 499 aa12.85□□□□□ -0.35
CDK3-201ENST00000425876 ACSM3Q53FZ2 586 aa12.85□□□□□ -0.35
CDK3-201ENST00000425876 SLC25A25Q6KCM7 469 aa12.85□□□□□ -0.35
CDK3-201ENST00000425876 FDX2Q6P4F2 183 aa12.85□□□□□ -0.35
CDK3-201ENST00000425876 KCTD18Q6PI47 426 aaPredicted RBP12.85□□□□□ -0.35
CDK3-201ENST00000425876 CREB3L2Q70SY1 520 aa12.85□□□□□ -0.35
CDK3-201ENST00000425876 GGNQ86UU5 652 aa12.85□□□□□ -0.35
CDK3-201ENST00000425876 VASH2Q86V25 355 aa12.85□□□□□ -0.35
CDK3-201ENST00000425876 TPRA1Q86W33 373 aa12.85□□□□□ -0.35
CDK3-201ENST00000425876 GLB1L2Q8IW92 636 aa12.85□□□□□ -0.35
CDK3-201ENST00000425876 SULF2Q8IWU5 870 aa12.85□□□□□ -0.35
CDK3-201ENST00000425876 ZNF679Q8IYX0 411 aa12.85□□□□□ -0.35
CDK3-201ENST00000425876 YIPF7Q8N8F6 280 aa12.85□□□□□ -0.35
CDK3-201ENST00000425876 THEM6Q8WUY1 208 aa12.85□□□□□ -0.35
CDK3-201ENST00000425876 AP3S1Q92572 193 aa12.85□□□□□ -0.35
CDK3-201ENST00000425876 HAS2Q92819 552 aa12.85□□□□□ -0.35
CDK3-201ENST00000425876 TPK1Q9H3S4 243 aa12.85□□□□□ -0.35
CDK3-201ENST00000425876 CCDC86Q9H6F5 360 aaKnown RBP12.85□□□□□ -0.35
CDK3-201ENST00000425876 SMURF1Q9HCE7 757 aa12.85□□□□□ -0.35
CDK3-201ENST00000425876 PLA2G3Q9NZ20 509 aa12.85□□□□□ -0.35
CDK3-201ENST00000425876 PLEKHB1Q9UF11 243 aaPredicted RBP12.85□□□□□ -0.35
CDK3-201ENST00000425876 ASPMQ8IZT6 3477 aa12.84□□□□□ -0.35
CDK3-201ENST00000425876 ARPC4-TTLL3A0A0A6YYG9 625 aa12.84□□□□□ -0.35
CDK3-201ENST00000425876 KLRC4-KLRK1H3BQV0 150 aa12.84□□□□□ -0.35
CDK3-201ENST00000425876 TNFSF11O14788 317 aa12.84□□□□□ -0.35
CDK3-201ENST00000425876 SPARCP09486 303 aa12.84□□□□□ -0.35
CDK3-201ENST00000425876 CLEC2LP0C7M8 214 aa12.84□□□□□ -0.35
CDK3-201ENST00000425876 PSKH1P11801 424 aa12.84□□□□□ -0.35
CDK3-201ENST00000425876 CD46P15529 392 aa12.84□□□□□ -0.35
CDK3-201ENST00000425876 CD40LGP29965 261 aa12.84□□□□□ -0.35
CDK3-201ENST00000425876 PSMB10P40306 273 aa12.84□□□□□ -0.35
CDK3-201ENST00000425876 ZNF45Q02386 682 aa12.84□□□□□ -0.35
CDK3-201ENST00000425876 HNRNPA0Q13151 305 aaKnown RBP12.84□□□□□ -0.35
CDK3-201ENST00000425876 ALKBH1Q13686 389 aaKnown RBP12.84□□□□□ -0.35
CDK3-201ENST00000425876 INSL4Q14641 139 aa12.84□□□□□ -0.35
CDK3-201ENST00000425876 SLC17A1Q14916 467 aa12.84□□□□□ -0.35
CDK3-201ENST00000425876 YIF1BQ5BJH7 314 aa12.84□□□□□ -0.35
CDK3-201ENST00000425876 WIPI1Q5MNZ9 446 aaPredicted RBP12.84□□□□□ -0.35
CDK3-201ENST00000425876 SLC25A47Q6Q0C1 308 aa12.84□□□□□ -0.35
CDK3-201ENST00000425876 UNQ9370/PRO34162Q6UXP9 181 aa12.84□□□□□ -0.35
CDK3-201ENST00000425876 CEACAM19Q7Z692 300 aa12.84□□□□□ -0.35
CDK3-201ENST00000425876 OR9K2Q8NGE7 335 aa12.84□□□□□ -0.35
CDK3-201ENST00000425876 OR2V1Q8NHB1 315 aa12.84□□□□□ -0.35
CDK3-201ENST00000425876 WDFY2Q96P53 400 aa12.84□□□□□ -0.35
CDK3-201ENST00000425876 QPCTLQ9NXS2 382 aa12.84□□□□□ -0.35
CDK3-201ENST00000425876 IKZF2Q9UKS7 526 aa12.84□□□□□ -0.35
CDK3-201ENST00000425876 ZNF281Q9Y2X9 895 aa12.84□□□□□ -0.35
CDK3-201ENST00000425876 MED12Q93074 2177 aa12.84□□□□□ -0.35
CDK3-201ENST00000425876 IGKV1D-43A0A0B4J1Z2 117 aa12.83□□□□□ -0.36
CDK3-201ENST00000425876 TRAV1-2A0A0B4J238 106 aa12.83□□□□□ -0.36
CDK3-201ENST00000425876 NPIPA2E9PIF3 369 aa12.83□□□□□ -0.36
CDK3-201ENST00000425876 NPIPA3F8WFD2 350 aa12.83□□□□□ -0.36
CDK3-201ENST00000425876 J3QRK9 145 aa12.83□□□□□ -0.36
CDK3-201ENST00000425876 NKX2-8O15522 239 aa12.83□□□□□ -0.36
CDK3-201ENST00000425876 TMCC2O75069 709 aa12.83□□□□□ -0.36
CDK3-201ENST00000425876 ARL6IP5O75915 188 aa12.83□□□□□ -0.36
CDK3-201ENST00000425876 GLSO94925 669 aaPredicted RBP12.83□□□□□ -0.36
CDK3-201ENST00000425876 KLK2P20151 261 aa12.83□□□□□ -0.36
CDK3-201ENST00000425876 POU3F2P20265 443 aaPredicted RBP12.83□□□□□ -0.36
CDK3-201ENST00000425876 ENPP1P22413 925 aa12.83□□□□□ -0.36
CDK3-201ENST00000425876 LAP3P28838 519 aa12.83□□□□□ -0.36
CDK3-201ENST00000425876 ZNF133P52736 654 aaPredicted RBP12.83□□□□□ -0.36
CDK3-201ENST00000425876 PPP5CP53041 499 aa12.83□□□□□ -0.36
CDK3-201ENST00000425876 CLDN20P56880 219 aa12.83□□□□□ -0.36
CDK3-201ENST00000425876 CARD18P57730 90 aa12.83□□□□□ -0.36
CDK3-201ENST00000425876 RPS11P62280 158 aaKnown RBP eCLIP12.83□□□□□ -0.36
CDK3-201ENST00000425876 FOXC1Q12948 553 aa12.83□□□□□ -0.36
CDK3-201ENST00000425876 CAMK2DQ13557 499 aa12.83□□□□□ -0.36
CDK3-201ENST00000425876 ZMAT1Q5H9K5 638 aa12.83□□□□□ -0.36
CDK3-201ENST00000425876 PDSS1Q5T2R2 415 aa12.83□□□□□ -0.36
CDK3-201ENST00000425876 HBMQ6B0K9 141 aa12.83□□□□□ -0.36
CDK3-201ENST00000425876 C16orf87Q6PH81 154 aa12.83□□□□□ -0.36
CDK3-201ENST00000425876 DEGS2Q6QHC5 323 aa12.83□□□□□ -0.36
CDK3-201ENST00000425876 CCDC190Q86UF4 302 aa12.83□□□□□ -0.36
CDK3-201ENST00000425876 INTS12Q96CB8 462 aaKnown RBP12.83□□□□□ -0.36
CDK3-201ENST00000425876 MAP6Q96JE9 813 aa12.83□□□□□ -0.36
CDK3-201ENST00000425876 KCNS3Q9BQ31 491 aa12.83□□□□□ -0.36
CDK3-201ENST00000425876 ABHD6Q9BV23 337 aa12.83□□□□□ -0.36
CDK3-201ENST00000425876 SRXN1Q9BYN0 137 aa12.83□□□□□ -0.36
CDK3-201ENST00000425876 TTTY12Q9BZ98 90 aa12.83□□□□□ -0.36
CDK3-201ENST00000425876 ZNF552Q9H707 407 aaPredicted RBP12.83□□□□□ -0.36
CDK3-201ENST00000425876 SLCO1C1Q9NYB5 712 aa12.83□□□□□ -0.36
CDK3-201ENST00000425876 SHISA3A0PJX4 238 aa12.82□□□□□ -0.36
CDK3-201ENST00000425876 PSMD9O00233 223 aa12.82□□□□□ -0.36
CDK3-201ENST00000425876 CTDSP2O14595 271 aa12.82□□□□□ -0.36
CDK3-201ENST00000425876 EIF1AYO14602 144 aaKnown RBP12.82□□□□□ -0.36
CDK3-201ENST00000425876 SMAD9O15198 467 aaKnown RBP12.82□□□□□ -0.36
CDK3-201ENST00000425876 ZNF254O75437 659 aa12.82□□□□□ -0.36
CDK3-201ENST00000425876 UCHL1P09936 223 aa12.82□□□□□ -0.36
CDK3-201ENST00000425876 SPINK2P20155 84 aa12.82□□□□□ -0.36
CDK3-201ENST00000425876 MYL9P24844 172 aa12.82□□□□□ -0.36
CDK3-201ENST00000425876 CALRP27797 417 aaKnown RBP12.82□□□□□ -0.36
CDK3-201ENST00000425876 RPS27P42677 84 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms