RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 ZBTB46Q86UZ6 589 aa10.85□□□□□ -0.67
HLA-DQB1-203ENST00000399082 JAZF1Q86VZ6 243 aa10.85□□□□□ -0.67
HLA-DQB1-203ENST00000399082 C17orf78Q8N4C9 275 aa10.85□□□□□ -0.67
HLA-DQB1-203ENST00000399082 OR9Q1Q8NGQ5 310 aa10.85□□□□□ -0.67
HLA-DQB1-203ENST00000399082 OR52N5Q8NH56 324 aa10.85□□□□□ -0.67
HLA-DQB1-203ENST00000399082 FNDC8Q8TC99 324 aa10.85□□□□□ -0.67
HLA-DQB1-203ENST00000399082 KCTD12Q96CX2 325 aaKnown RBP10.85□□□□□ -0.67
HLA-DQB1-203ENST00000399082 RBP7Q96R05 134 aa10.85□□□□□ -0.67
HLA-DQB1-203ENST00000399082 GRIP2Q9C0E4 1043 aa10.85□□□□□ -0.67
HLA-DQB1-203ENST00000399082 TOR3AQ9H497 397 aa10.85□□□□□ -0.67
HLA-DQB1-203ENST00000399082 RIBC2Q9H4K1 309 aa10.85□□□□□ -0.67
HLA-DQB1-203ENST00000399082 MED20Q9H944 212 aa10.85□□□□□ -0.67
HLA-DQB1-203ENST00000399082 HINT3Q9NQE9 182 aaKnown RBP10.85□□□□□ -0.67
HLA-DQB1-203ENST00000399082 RPRD1BQ9NQG5 326 aaKnown RBP10.85□□□□□ -0.67
HLA-DQB1-203ENST00000399082 B9D1Q9UPM9 204 aa10.85□□□□□ -0.67
HLA-DQB1-203ENST00000399082 HRNRQ86YZ3 2850 aaPredicted RBP10.84□□□□□ -0.67
HLA-DQB1-203ENST00000399082 DCHS2Q6V1P9 2916 aa10.84□□□□□ -0.67
HLA-DQB1-203ENST00000399082 ARPC4-TTLL3A0A0A6YYG9 625 aa10.84□□□□□ -0.67
HLA-DQB1-203ENST00000399082 TUBAL3A6NHL2 446 aa10.84□□□□□ -0.67
HLA-DQB1-203ENST00000399082 FAM183AA6NL82 134 aa10.84□□□□□ -0.67
HLA-DQB1-203ENST00000399082 FAM171A2A8MVW0 826 aa10.84□□□□□ -0.67
HLA-DQB1-203ENST00000399082 H0YHG0 523 aa10.84□□□□□ -0.67
HLA-DQB1-203ENST00000399082 PRKYO43930 277 aa10.84□□□□□ -0.67
HLA-DQB1-203ENST00000399082 MPZL1O95297 269 aa10.84□□□□□ -0.67
HLA-DQB1-203ENST00000399082 RENP00797 406 aa10.84□□□□□ -0.67
HLA-DQB1-203ENST00000399082 PPP3CBP16298 524 aa10.84□□□□□ -0.67
HLA-DQB1-203ENST00000399082 PYCR1P32322 319 aa10.84□□□□□ -0.67
HLA-DQB1-203ENST00000399082 KIR2DL3P43628 341 aa10.84□□□□□ -0.67
HLA-DQB1-203ENST00000399082 SLC25A1P53007 311 aa10.84□□□□□ -0.67
HLA-DQB1-203ENST00000399082 RIPK1Q13546 671 aa10.84□□□□□ -0.67
HLA-DQB1-203ENST00000399082 ENDOGQ14249 297 aaKnown RBP10.84□□□□□ -0.67
HLA-DQB1-203ENST00000399082 UGT2A3Q6UWM9 527 aa10.84□□□□□ -0.67
HLA-DQB1-203ENST00000399082 LYPD4Q6UWN0 246 aa10.84□□□□□ -0.67
HLA-DQB1-203ENST00000399082 SKA3Q8IX90 412 aa10.84□□□□□ -0.67
HLA-DQB1-203ENST00000399082 ZNF295-AS1Q8N0V1 137 aa10.84□□□□□ -0.67
HLA-DQB1-203ENST00000399082 SLC22A24Q8N4F4 322 aa10.84□□□□□ -0.67
HLA-DQB1-203ENST00000399082 PTP4A1Q93096 173 aa10.84□□□□□ -0.67
HLA-DQB1-203ENST00000399082 ZC3HAV1LQ96H79 300 aaKnown RBP10.84□□□□□ -0.67
HLA-DQB1-203ENST00000399082 ZNF75AQ96N20 296 aa10.84□□□□□ -0.67
HLA-DQB1-203ENST00000399082 DACH2Q96NX9 599 aa10.84□□□□□ -0.67
HLA-DQB1-203ENST00000399082 PITX2Q99697 317 aa10.84□□□□□ -0.67
HLA-DQB1-203ENST00000399082 SH3GL3Q99963 347 aa10.84□□□□□ -0.67
HLA-DQB1-203ENST00000399082 MED18Q9BUE0 208 aa10.84□□□□□ -0.67
HLA-DQB1-203ENST00000399082 RACGAP1Q9H0H5 632 aa10.84□□□□□ -0.67
HLA-DQB1-203ENST00000399082 POLE4Q9NR33 117 aa10.84□□□□□ -0.67
HLA-DQB1-203ENST00000399082 B3GNT2Q9NY97 397 aa10.84□□□□□ -0.67
HLA-DQB1-203ENST00000399082 KLHL21Q9UJP4 597 aa10.84□□□□□ -0.67
HLA-DQB1-203ENST00000399082 COA3Q9Y2R0 106 aaPredicted RBP10.84□□□□□ -0.67
HLA-DQB1-203ENST00000399082 FKBP7Q9Y680 259 aa10.84□□□□□ -0.67
HLA-DQB1-203ENST00000399082 FBN2P35556 2912 aa10.83□□□□□ -0.68
HLA-DQB1-203ENST00000399082 NBPF19A0A087WUL8 3843 aa10.83□□□□□ -0.68
HLA-DQB1-203ENST00000399082 RIIAD1A6NNX1 92 aa10.83□□□□□ -0.68
HLA-DQB1-203ENST00000399082 DEFB108AA8MXU0 73 aa10.83□□□□□ -0.68
HLA-DQB1-203ENST00000399082 KHDRBS3O75525 346 aaKnown RBP10.83□□□□□ -0.68
HLA-DQB1-203ENST00000399082 ATP6V1G2O95670 118 aa10.83□□□□□ -0.68
HLA-DQB1-203ENST00000399082 HLA-HP01893 362 aa10.83□□□□□ -0.68
HLA-DQB1-203ENST00000399082 TFP02787 698 aa10.83□□□□□ -0.68
HLA-DQB1-203ENST00000399082 GYPBP06028 91 aa10.83□□□□□ -0.68
HLA-DQB1-203ENST00000399082 PATE4P0C8F1 98 aa10.83□□□□□ -0.68
HLA-DQB1-203ENST00000399082 EPXP11678 715 aa10.83□□□□□ -0.68
HLA-DQB1-203ENST00000399082 PSKH1P11801 424 aa10.83□□□□□ -0.68
HLA-DQB1-203ENST00000399082 NR2C1P13056 603 aa10.83□□□□□ -0.68
HLA-DQB1-203ENST00000399082 SPI1P17947 270 aa10.83□□□□□ -0.68
HLA-DQB1-203ENST00000399082 CRYGSP22914 178 aa10.83□□□□□ -0.68
HLA-DQB1-203ENST00000399082 ZNF84P51523 738 aa10.83□□□□□ -0.68
HLA-DQB1-203ENST00000399082 NRN1LQ496H8 165 aa10.83□□□□□ -0.68
HLA-DQB1-203ENST00000399082 LINC01590Q5TEZ4 76 aa10.83□□□□□ -0.68
HLA-DQB1-203ENST00000399082 CRYBG3Q68DQ2 2970 aa10.83□□□□□ -0.68
HLA-DQB1-203ENST00000399082 ZNF787Q6DD87 383 aa10.83□□□□□ -0.68
HLA-DQB1-203ENST00000399082 MYPOPQ86VE0 399 aaPredicted RBP10.83□□□□□ -0.68
HLA-DQB1-203ENST00000399082 P2RY8Q86VZ1 359 aa10.83□□□□□ -0.68
HLA-DQB1-203ENST00000399082 GALNT4Q8N4A0 578 aa10.83□□□□□ -0.68
HLA-DQB1-203ENST00000399082 BBS1Q8NFJ9 593 aa10.83□□□□□ -0.68
HLA-DQB1-203ENST00000399082 FAM222BQ8WU58 562 aa10.83□□□□□ -0.68
HLA-DQB1-203ENST00000399082 HSD17B8Q92506 261 aa10.83□□□□□ -0.68
HLA-DQB1-203ENST00000399082 RERGLQ9H628 205 aa10.83□□□□□ -0.68
HLA-DQB1-203ENST00000399082 SEC61A2Q9H9S3 476 aa10.83□□□□□ -0.68
HLA-DQB1-203ENST00000399082 SRA1Q9HD15 236 aaKnown RBP10.83□□□□□ -0.68
HLA-DQB1-203ENST00000399082 MRPL22Q9NWU5 206 aaKnown RBP10.83□□□□□ -0.68
HLA-DQB1-203ENST00000399082 TVP23BQ9NYZ1 205 aa10.83□□□□□ -0.68
HLA-DQB1-203ENST00000399082 NDRG4Q9ULP0 352 aaKnown RBP10.83□□□□□ -0.68
HLA-DQB1-203ENST00000399082 A0A1W2PPL8 197 aa10.82□□□□□ -0.68
HLA-DQB1-203ENST00000399082 A0A1W2PPR1 153 aa10.82□□□□□ -0.68
HLA-DQB1-203ENST00000399082 FAM221AA4D161 298 aa10.82□□□□□ -0.68
HLA-DQB1-203ENST00000399082 IFNGP01579 166 aa10.82□□□□□ -0.68
HLA-DQB1-203ENST00000399082 HMGN1P05114 100 aa10.82□□□□□ -0.68
HLA-DQB1-203ENST00000399082 MMP7P09237 267 aaPredicted RBP10.82□□□□□ -0.68
HLA-DQB1-203ENST00000399082 SLC2A5P22732 501 aa10.82□□□□□ -0.68
HLA-DQB1-203ENST00000399082 LAP3P28838 519 aa10.82□□□□□ -0.68
HLA-DQB1-203ENST00000399082 CRABP1P29762 137 aa10.82□□□□□ -0.68
HLA-DQB1-203ENST00000399082 GGT2P36268 569 aa10.82□□□□□ -0.68
HLA-DQB1-203ENST00000399082 PEX19P40855 299 aa10.82□□□□□ -0.68
HLA-DQB1-203ENST00000399082 RAD23AP54725 363 aa10.82□□□□□ -0.68
HLA-DQB1-203ENST00000399082 PPA1Q15181 289 aa10.82□□□□□ -0.68
HLA-DQB1-203ENST00000399082 KCNMB1Q16558 191 aa10.82□□□□□ -0.68
HLA-DQB1-203ENST00000399082 MEP1BQ16820 701 aa10.82□□□□□ -0.68
HLA-DQB1-203ENST00000399082 PLBD1Q6P4A8 553 aa10.82□□□□□ -0.68
HLA-DQB1-203ENST00000399082 BCDIN3DQ7Z5W3 292 aaKnown RBP10.82□□□□□ -0.68
HLA-DQB1-203ENST00000399082 MDP1Q86V88 176 aa10.82□□□□□ -0.68
HLA-DQB1-203ENST00000399082 WFDC8Q8IUA0 241 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms