RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 LRRC23Q53EV4 343 aaPredicted RBP12.7□□□□□ -0.38
CTSD-202ENST00000367196 FAM205BPQ63HN1 556 aa12.7□□□□□ -0.38
CTSD-202ENST00000367196 SHQ1Q6PI26 577 aaKnown RBP12.7□□□□□ -0.38
CTSD-202ENST00000367196 RINLQ6ZS11 566 aa12.7□□□□□ -0.38
CTSD-202ENST00000367196 NKAIN4Q8IVV8 208 aa12.7□□□□□ -0.38
CTSD-202ENST00000367196 LRRC18Q8N456 261 aa12.7□□□□□ -0.38
CTSD-202ENST00000367196 ICA1LQ8NDH6 482 aa12.7□□□□□ -0.38
CTSD-202ENST00000367196 CLDND2Q8NHS1 167 aa12.7□□□□□ -0.38
CTSD-202ENST00000367196 TMEM186Q96B77 213 aa12.7□□□□□ -0.38
CTSD-202ENST00000367196 PRRC1Q96M27 445 aa12.7□□□□□ -0.38
CTSD-202ENST00000367196 TXNIPQ9H3M7 391 aa12.7□□□□□ -0.38
CTSD-202ENST00000367196 DECR2Q9NUI1 292 aa12.7□□□□□ -0.38
CTSD-202ENST00000367196 EIF3KQ9UBQ5 218 aaKnown RBP12.7□□□□□ -0.38
CTSD-202ENST00000367196 METRNQ9UJH8 293 aa12.7□□□□□ -0.38
CTSD-202ENST00000367196 FXYD1O00168 92 aa12.69□□□□□ -0.38
CTSD-202ENST00000367196 TPD52L2O43399 206 aaKnown RBP12.69□□□□□ -0.38
CTSD-202ENST00000367196 NCR1O76036 304 aa12.69□□□□□ -0.38
CTSD-202ENST00000367196 MSMBP08118 114 aa12.69□□□□□ -0.38
CTSD-202ENST00000367196 CCL2P13500 99 aa12.69□□□□□ -0.38
CTSD-202ENST00000367196 COL8A2P25067 703 aa12.69□□□□□ -0.38
CTSD-202ENST00000367196 STOMP27105 288 aa12.69□□□□□ -0.38
CTSD-202ENST00000367196 GCH1P30793 250 aa12.69□□□□□ -0.38
CTSD-202ENST00000367196 RUNX1T1Q06455 604 aa12.69□□□□□ -0.38
CTSD-202ENST00000367196 PIN1Q13526 163 aaPredicted RBP12.69□□□□□ -0.38
CTSD-202ENST00000367196 ALKBH6Q3KRA9 238 aa12.69□□□□□ -0.38
CTSD-202ENST00000367196 ANKDD1AQ495B1 522 aa12.69□□□□□ -0.38
CTSD-202ENST00000367196 CYBRD1Q53TN4 286 aa12.69□□□□□ -0.38
CTSD-202ENST00000367196 ALG10Q5BKT4 473 aa12.69□□□□□ -0.38
CTSD-202ENST00000367196 PABPC1L2AQ5JQF8 200 aa12.69□□□□□ -0.38
CTSD-202ENST00000367196 ARMC4Q5T2S8 1044 aa12.69□□□□□ -0.38
CTSD-202ENST00000367196 ARPINQ7Z6K5 226 aa12.69□□□□□ -0.38
CTSD-202ENST00000367196 ALDH16A1Q8IZ83 802 aa12.69□□□□□ -0.38
CTSD-202ENST00000367196 PAQR4Q8N4S7 273 aaPredicted RBP12.69□□□□□ -0.38
CTSD-202ENST00000367196 CPEB3Q8NE35 698 aaKnown RBP12.69□□□□□ -0.38
CTSD-202ENST00000367196 OR2T12Q8NG77 320 aa12.69□□□□□ -0.38
CTSD-202ENST00000367196 OR1J1Q8NGS3 322 aa12.69□□□□□ -0.38
CTSD-202ENST00000367196 C10orf82Q8WW14 230 aa12.69□□□□□ -0.38
CTSD-202ENST00000367196 RAB39BQ96DA2 213 aa12.69□□□□□ -0.38
CTSD-202ENST00000367196 ALG12Q9BV10 488 aa12.69□□□□□ -0.38
CTSD-202ENST00000367196 RACGAP1Q9H0H5 632 aa12.69□□□□□ -0.38
CTSD-202ENST00000367196 OR51B6Q9H340 312 aa12.69□□□□□ -0.38
CTSD-202ENST00000367196 NARFLQ9H6Q4 476 aa12.69□□□□□ -0.38
CTSD-202ENST00000367196 C20orf141Q9NUB4 165 aa12.69□□□□□ -0.38
CTSD-202ENST00000367196 HIF3AQ9Y2N7 669 aa12.69□□□□□ -0.38
CTSD-202ENST00000367196 A0A0A6YYJ9 748 aa12.68□□□□□ -0.38
CTSD-202ENST00000367196 IGHV1-69-2A0A0G2JMI3 117 aa12.68□□□□□ -0.38
CTSD-202ENST00000367196 PLSCR5A0PG75 271 aa12.68□□□□□ -0.38
CTSD-202ENST00000367196 SLC22A2O15244 555 aa12.68□□□□□ -0.38
CTSD-202ENST00000367196 RP2O75695 350 aa12.68□□□□□ -0.38
CTSD-202ENST00000367196 SLC2A10O95528 541 aa12.68□□□□□ -0.38
CTSD-202ENST00000367196 MMP7P09237 267 aaPredicted RBP12.68□□□□□ -0.38
CTSD-202ENST00000367196 TSPAN19P0C672 248 aa12.68□□□□□ -0.38
CTSD-202ENST00000367196 GAAP10253 952 aa12.68□□□□□ -0.38
CTSD-202ENST00000367196 TNFRSF1BP20333 461 aa12.68□□□□□ -0.38
CTSD-202ENST00000367196 CCNOP22674 350 aa12.68□□□□□ -0.38
CTSD-202ENST00000367196 OR1E2P47887 323 aa12.68□□□□□ -0.38
CTSD-202ENST00000367196 PCBD1P61457 104 aa12.68□□□□□ -0.38
CTSD-202ENST00000367196 SELENOWP63302 87 aa12.68□□□□□ -0.38
CTSD-202ENST00000367196 CCL8P80075 99 aa12.68□□□□□ -0.38
CTSD-202ENST00000367196 KLF10Q13118 480 aa12.68□□□□□ -0.38
CTSD-202ENST00000367196 ZNF718Q3SXZ3 478 aa12.68□□□□□ -0.38
CTSD-202ENST00000367196 THEM4Q5T1C6 240 aa12.68□□□□□ -0.38
CTSD-202ENST00000367196 YIPF5Q969M3 257 aa12.68□□□□□ -0.38
CTSD-202ENST00000367196 BPIFA2Q96DR5 249 aa12.68□□□□□ -0.38
CTSD-202ENST00000367196 TIMD4Q96H15 378 aa12.68□□□□□ -0.38
CTSD-202ENST00000367196 TPD52L3Q96J77 140 aa12.68□□□□□ -0.38
CTSD-202ENST00000367196 ZNF583Q96ND8 569 aa12.68□□□□□ -0.38
CTSD-202ENST00000367196 RBP7Q96R05 134 aa12.68□□□□□ -0.38
CTSD-202ENST00000367196 NDEL1Q9GZM8 345 aa12.68□□□□□ -0.38
CTSD-202ENST00000367196 SAP30LQ9HAJ7 183 aa12.68□□□□□ -0.38
CTSD-202ENST00000367196 CYSLTR2Q9NS75 346 aa12.68□□□□□ -0.38
CTSD-202ENST00000367196 HIF1ANQ9NWT6 349 aa12.68□□□□□ -0.38
CTSD-202ENST00000367196 CGGBP1Q9UFW8 167 aaPredicted RBP12.68□□□□□ -0.38
CTSD-202ENST00000367196 TRAV20A0A0B4J274 112 aa12.67□□□□□ -0.38
CTSD-202ENST00000367196 A6NIZ1 184 aa12.67□□□□□ -0.38
CTSD-202ENST00000367196 CLDN25C9JDP6 229 aa12.67□□□□□ -0.38
CTSD-202ENST00000367196 H3BSA7 217 aa12.67□□□□□ -0.38
CTSD-202ENST00000367196 SHOX2O60902 331 aaPredicted RBP12.67□□□□□ -0.38
CTSD-202ENST00000367196 CLPTM1O96005 669 aa12.67□□□□□ -0.38
CTSD-202ENST00000367196 IGHV3-13P01766 116 aa12.67□□□□□ -0.38
CTSD-202ENST00000367196 IGHMP01871 453 aa12.67□□□□□ -0.38
CTSD-202ENST00000367196 IFNW1P05000 195 aa12.67□□□□□ -0.38
CTSD-202ENST00000367196 IFI30P13284 250 aa12.67□□□□□ -0.38
CTSD-202ENST00000367196 H2AFXP16104 143 aaPredicted RBP12.67□□□□□ -0.38
CTSD-202ENST00000367196 KDELR2P33947 212 aa12.67□□□□□ -0.38
CTSD-202ENST00000367196 LIPAP38571 399 aa12.67□□□□□ -0.38
CTSD-202ENST00000367196 CRYBB2P43320 205 aa12.67□□□□□ -0.38
CTSD-202ENST00000367196 MAGEB1P43366 347 aa12.67□□□□□ -0.38
CTSD-202ENST00000367196 GDI2P50395 445 aaKnown RBP12.67□□□□□ -0.38
CTSD-202ENST00000367196 RAP1BP61224 184 aa12.67□□□□□ -0.38
CTSD-202ENST00000367196 RPL27P61353 136 aaKnown RBP12.67□□□□□ -0.38
CTSD-202ENST00000367196 RAP1AP62834 184 aa12.67□□□□□ -0.38
CTSD-202ENST00000367196 TOP3AQ13472 1001 aaPredicted RBP12.67□□□□□ -0.38
CTSD-202ENST00000367196 SGCAQ16586 387 aa12.67□□□□□ -0.38
CTSD-202ENST00000367196 ZMAT1Q5H9K5 638 aa12.67□□□□□ -0.38
CTSD-202ENST00000367196 MOSPD2Q8NHP6 518 aa12.67□□□□□ -0.38
CTSD-202ENST00000367196 HDAC2Q92769 488 aaKnown RBP12.67□□□□□ -0.38
CTSD-202ENST00000367196 ELMOD3Q96FG2 381 aa12.67□□□□□ -0.38
CTSD-202ENST00000367196 WACQ9BTA9 647 aa12.67□□□□□ -0.38
CTSD-202ENST00000367196 SAR1AQ9NR31 198 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms