RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 ZFP3Q96NJ6 502 aa18.23■□□□□ 0.51
SHISA4-201ENST00000362011 COA3Q9Y2R0 106 aaPredicted RBP18.23■□□□□ 0.51
SHISA4-201ENST00000362011 CREBBPQ92793 2442 aa18.23■□□□□ 0.51
SHISA4-201ENST00000362011 IGKV1D-43A0A0B4J1Z2 117 aa18.23■□□□□ 0.51
SHISA4-201ENST00000362011 TIMP3P35625 211 aa18.23■□□□□ 0.51
SHISA4-201ENST00000362011 ATP6V1E1P36543 226 aa18.23■□□□□ 0.51
SHISA4-201ENST00000362011 PER3P56645 1201 aa18.23■□□□□ 0.51
SHISA4-201ENST00000362011 SIRPAP78324 504 aa18.23■□□□□ 0.51
SHISA4-201ENST00000362011 SEM1Q6ZVN7 128 aa18.23■□□□□ 0.51
SHISA4-201ENST00000362011 FAM214BQ7L5A3 538 aa18.23■□□□□ 0.51
SHISA4-201ENST00000362011 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.23■□□□□ 0.51
SHISA4-201ENST00000362011 POMGNT2Q8NAT1 580 aa18.23■□□□□ 0.51
SHISA4-201ENST00000362011 OR51G2Q8NGK0 314 aa18.23■□□□□ 0.51
SHISA4-201ENST00000362011 OR52I1Q8NGK6 324 aa18.23■□□□□ 0.51
SHISA4-201ENST00000362011 PRR7Q8TB68 274 aa18.23■□□□□ 0.51
SHISA4-201ENST00000362011 FGF20Q9NP95 211 aaPredicted RBP18.23■□□□□ 0.51
SHISA4-201ENST00000362011 EXOGQ9Y2C4 368 aaKnown RBP18.23■□□□□ 0.51
SHISA4-201ENST00000362011 CELSR2Q9HCU4 2923 aa18.23■□□□□ 0.51
SHISA4-201ENST00000362011 NCOA6Q14686 2063 aaPredicted RBP18.22■□□□□ 0.51
SHISA4-201ENST00000362011 CACNA1DQ01668 2161 aa18.22■□□□□ 0.51
SHISA4-201ENST00000362011 DHHO43323 396 aa18.22■□□□□ 0.51
SHISA4-201ENST00000362011 RGS10O43665 173 aa18.22■□□□□ 0.51
SHISA4-201ENST00000362011 MRPS14O60783 128 aaKnown RBP18.22■□□□□ 0.51
SHISA4-201ENST00000362011 UPK3AO75631 287 aa18.22■□□□□ 0.51
SHISA4-201ENST00000362011 KRT33AO76009 404 aa18.22■□□□□ 0.51
SHISA4-201ENST00000362011 APOL3O95236 402 aa18.22■□□□□ 0.51
SHISA4-201ENST00000362011 RAB36O95755 333 aa18.22■□□□□ 0.51
SHISA4-201ENST00000362011 IL2RAP01589 272 aa18.22■□□□□ 0.51
SHISA4-201ENST00000362011 HLA-DQA2P01906 255 aa18.22■□□□□ 0.51
SHISA4-201ENST00000362011 CDK1P06493 297 aa18.22■□□□□ 0.51
SHISA4-201ENST00000362011 CRHP06850 196 aa18.22■□□□□ 0.51
SHISA4-201ENST00000362011 STSP08842 583 aa18.22■□□□□ 0.51
SHISA4-201ENST00000362011 TMIGD3P0DMS9 266 aaPredicted RBP18.22■□□□□ 0.51
SHISA4-201ENST00000362011 COL8A1P27658 744 aa18.22■□□□□ 0.51
SHISA4-201ENST00000362011 ZNF84P51523 738 aa18.22■□□□□ 0.51
SHISA4-201ENST00000362011 CDH15P55291 814 aa18.22■□□□□ 0.51
SHISA4-201ENST00000362011 GLO1Q04760 184 aa18.22■□□□□ 0.51
SHISA4-201ENST00000362011 ST3GAL4Q11206 333 aa18.22■□□□□ 0.51
SHISA4-201ENST00000362011 C10orf128Q5T292 105 aa18.22■□□□□ 0.51
SHISA4-201ENST00000362011 RIPPLY2Q5TAB7 128 aa18.22■□□□□ 0.51
SHISA4-201ENST00000362011 TSPO2Q5TGU0 170 aa18.22■□□□□ 0.51
SHISA4-201ENST00000362011 LRFN4Q6PJG9 635 aa18.22■□□□□ 0.51
SHISA4-201ENST00000362011 C3P1Q6ZMU1 363 aa18.22■□□□□ 0.51
SHISA4-201ENST00000362011 SGCDQ92629 289 aa18.22■□□□□ 0.51
SHISA4-201ENST00000362011 TMEM80Q96HE8 168 aa18.22■□□□□ 0.51
SHISA4-201ENST00000362011 CNN2Q99439 309 aaKnown RBP18.22■□□□□ 0.51
SHISA4-201ENST00000362011 C12orf49Q9H741 205 aa18.22■□□□□ 0.51
SHISA4-201ENST00000362011 ADGRL4Q9HBW9 690 aa18.22■□□□□ 0.51
SHISA4-201ENST00000362011 ERVK-18Q9QC07 812 aa18.22■□□□□ 0.51
SHISA4-201ENST00000362011 TINAGQ9UJW2 476 aa18.22■□□□□ 0.51
SHISA4-201ENST00000362011 PCDHGB1Q9Y5G3 927 aa18.22■□□□□ 0.51
SHISA4-201ENST00000362011 A0A1W2PPL8 197 aa18.21■□□□□ 0.51
SHISA4-201ENST00000362011 FADS2O95864 444 aaKnown RBP18.21■□□□□ 0.51
SHISA4-201ENST00000362011 MRPL3P09001 348 aaKnown RBP18.21■□□□□ 0.51
SHISA4-201ENST00000362011 SBK2P0C263 348 aa18.21■□□□□ 0.51
SHISA4-201ENST00000362011 OR3A2P47893 321 aa18.21■□□□□ 0.51
SHISA4-201ENST00000362011 CASP6P55212 293 aa18.21■□□□□ 0.51
SHISA4-201ENST00000362011 PIGFQ07326 219 aa18.21■□□□□ 0.51
SHISA4-201ENST00000362011 ZNF773Q6PK81 442 aa18.21■□□□□ 0.51
SHISA4-201ENST00000362011 SHFQ7M4L6 423 aa18.21■□□□□ 0.51
SHISA4-201ENST00000362011 GLB1L2Q8IW92 636 aa18.21■□□□□ 0.51
SHISA4-201ENST00000362011 RPRMLQ8N4K4 120 aa18.21■□□□□ 0.51
SHISA4-201ENST00000362011 CNEP1R1Q8N9A8 125 aa18.21■□□□□ 0.51
SHISA4-201ENST00000362011 ZNF511Q8NB15 262 aa18.21■□□□□ 0.51
SHISA4-201ENST00000362011 TSPAN14Q8NG11 270 aa18.21■□□□□ 0.51
SHISA4-201ENST00000362011 OR4F15Q8NGB8 312 aa18.21■□□□□ 0.51
SHISA4-201ENST00000362011 OR6K3Q8NGY3 331 aa18.21■□□□□ 0.51
SHISA4-201ENST00000362011 FOXN4Q96NZ1 517 aa18.21■□□□□ 0.51
SHISA4-201ENST00000362011 ALKBH3Q96Q83 286 aaPredicted RBP18.21■□□□□ 0.51
SHISA4-201ENST00000362011 TTYH2Q9BSA4 534 aa18.21■□□□□ 0.51
SHISA4-201ENST00000362011 CCDC90BQ9GZT6 254 aa18.21■□□□□ 0.51
SHISA4-201ENST00000362011 MARCH7Q9H992 704 aa18.21■□□□□ 0.51
SHISA4-201ENST00000362011 SLC7A10Q9NS82 523 aa18.21■□□□□ 0.51
SHISA4-201ENST00000362011 UPB1Q9UBR1 384 aa18.21■□□□□ 0.51
SHISA4-201ENST00000362011 SNX5Q9Y5X3 404 aa18.21■□□□□ 0.51
SHISA4-201ENST00000362011 CENPEQ02224 2701 aa18.2■□□□□ 0.5
SHISA4-201ENST00000362011 A0A087WXM4 84 aa18.2■□□□□ 0.5
SHISA4-201ENST00000362011 TVP23AA6NH52 213 aa18.2■□□□□ 0.5
SHISA4-201ENST00000362011 GPANK1O95872 356 aa18.2■□□□□ 0.5
SHISA4-201ENST00000362011 GLI4P10075 376 aa18.2■□□□□ 0.5
SHISA4-201ENST00000362011 EDNRAP25101 427 aa18.2■□□□□ 0.5
SHISA4-201ENST00000362011 LAP3P28838 519 aa18.2■□□□□ 0.5
SHISA4-201ENST00000362011 NAA10P41227 235 aaPredicted RBP18.2■□□□□ 0.5
SHISA4-201ENST00000362011 KIR2DL2P43627 348 aaPredicted RBP18.2■□□□□ 0.5
SHISA4-201ENST00000362011 HSF2Q03933 536 aa18.2■□□□□ 0.5
SHISA4-201ENST00000362011 LYPD4Q6UWN0 246 aa18.2■□□□□ 0.5
SHISA4-201ENST00000362011 PRSS48Q7RTY5 328 aa18.2■□□□□ 0.5
SHISA4-201ENST00000362011 ERI1Q8IV48 349 aaKnown RBP18.2■□□□□ 0.5
SHISA4-201ENST00000362011 INTS14Q96SY0 518 aa18.2■□□□□ 0.5
SHISA4-201ENST00000362011 RBM24Q9BX46 236 aaKnown RBP18.2■□□□□ 0.5
SHISA4-201ENST00000362011 GPR35Q9HC97 309 aa18.2■□□□□ 0.5
SHISA4-201ENST00000362011 SH3BGRL2Q9UJC5 107 aa18.2■□□□□ 0.5
SHISA4-201ENST00000362011 DIMT1Q9UNQ2 313 aaKnown RBP18.2■□□□□ 0.5
SHISA4-201ENST00000362011 SLC5A6Q9Y289 635 aa18.2■□□□□ 0.5
SHISA4-201ENST00000362011 CRYBG3Q68DQ2 2970 aa18.19■□□□□ 0.5
SHISA4-201ENST00000362011 SELENOFO60613 162 aa18.19■□□□□ 0.5
SHISA4-201ENST00000362011 TOXO94900 526 aa18.19■□□□□ 0.5
SHISA4-201ENST00000362011 IGHV3-9P01782 118 aa18.19■□□□□ 0.5
SHISA4-201ENST00000362011 MT-ND2P03891 347 aa18.19■□□□□ 0.5
SHISA4-201ENST00000362011 HTR1AP08908 422 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms