RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 SLC38A2Q96QD8 506 aa9.71□□□□□ -0.86
RTN3-204ENST00000354497 PAFAH2Q99487 392 aa9.71□□□□□ -0.86
RTN3-204ENST00000354497 THUMPD3Q9BV44 507 aaKnown RBP9.71□□□□□ -0.86
RTN3-204ENST00000354497 ZNF416Q9BWM5 594 aa9.71□□□□□ -0.86
RTN3-204ENST00000354497 PLK3Q9H4B4 646 aa9.71□□□□□ -0.86
RTN3-204ENST00000354497 SLC7A10Q9NS82 523 aa9.71□□□□□ -0.86
RTN3-204ENST00000354497 ZCCHC3Q9NUD5 404 aaKnown RBP9.71□□□□□ -0.86
RTN3-204ENST00000354497 SH3BP4Q9P0V3 963 aa9.71□□□□□ -0.86
RTN3-204ENST00000354497 GMPR2Q9P2T1 348 aaKnown RBP9.71□□□□□ -0.86
RTN3-204ENST00000354497 NDUFAF1Q9Y375 327 aa9.71□□□□□ -0.86
RTN3-204ENST00000354497 PCP4L1A6NKN8 68 aa9.7□□□□□ -0.86
RTN3-204ENST00000354497 ZNF264O43296 627 aa9.7□□□□□ -0.86
RTN3-204ENST00000354497 SBK3P0C264 359 aa9.7□□□□□ -0.86
RTN3-204ENST00000354497 H2AFB1P0C5Y9 115 aa9.7□□□□□ -0.86
RTN3-204ENST00000354497 H2AFB2P0C5Z0 115 aa9.7□□□□□ -0.86
RTN3-204ENST00000354497 NTF4P34130 210 aa9.7□□□□□ -0.86
RTN3-204ENST00000354497 CRHR1P34998 444 aa9.7□□□□□ -0.86
RTN3-204ENST00000354497 ADARB1P78563 741 aaKnown RBP9.7□□□□□ -0.86
RTN3-204ENST00000354497 AQP6Q13520 282 aa9.7□□□□□ -0.86
RTN3-204ENST00000354497 TRIM25Q14258 630 aaKnown RBP9.7□□□□□ -0.86
RTN3-204ENST00000354497 LASP1Q14847 261 aaKnown RBP9.7□□□□□ -0.86
RTN3-204ENST00000354497 ZNF385BQ569K4 471 aa9.7□□□□□ -0.86
RTN3-204ENST00000354497 Q5BKY6 102 aa9.7□□□□□ -0.86
RTN3-204ENST00000354497 SLC25A53Q5H9E4 307 aa9.7□□□□□ -0.86
RTN3-204ENST00000354497 CLLU1Q5K131 121 aa9.7□□□□□ -0.86
RTN3-204ENST00000354497 DCST2Q5T1A1 773 aa9.7□□□□□ -0.86
RTN3-204ENST00000354497 TSPO2Q5TGU0 170 aa9.7□□□□□ -0.86
RTN3-204ENST00000354497 STEAP3Q658P3 488 aa9.7□□□□□ -0.86
RTN3-204ENST00000354497 TREML4Q6UXN2 200 aa9.7□□□□□ -0.86
RTN3-204ENST00000354497 TIFABQ6ZNK6 161 aa9.7□□□□□ -0.86
RTN3-204ENST00000354497 CLEC4FQ8N1N0 589 aa9.7□□□□□ -0.86
RTN3-204ENST00000354497 BHLHE22Q8NFJ8 381 aaPredicted RBP9.7□□□□□ -0.86
RTN3-204ENST00000354497 OR52N1Q8NH53 320 aa9.7□□□□□ -0.86
RTN3-204ENST00000354497 MRPL24Q96A35 216 aaKnown RBP9.7□□□□□ -0.86
RTN3-204ENST00000354497 KCTD14Q9BQ13 255 aaPredicted RBP9.7□□□□□ -0.86
RTN3-204ENST00000354497 ZNF747Q9BV97 191 aa9.7□□□□□ -0.86
RTN3-204ENST00000354497 GHITMQ9H3K2 345 aa9.7□□□□□ -0.86
RTN3-204ENST00000354497 MID1IP1Q9NPA3 183 aa9.7□□□□□ -0.86
RTN3-204ENST00000354497 COA4Q9NYJ1 87 aa9.7□□□□□ -0.86
RTN3-204ENST00000354497 ELF5Q9UKW6 265 aaPredicted RBP9.7□□□□□ -0.86
RTN3-204ENST00000354497 SPIN1Q9Y657 262 aaPredicted RBP9.7□□□□□ -0.86
RTN3-204ENST00000354497 PLCE1Q9P212 2302 aa9.7□□□□□ -0.86
RTN3-204ENST00000354497 AGAP5A6NIR3 686 aa9.69□□□□□ -0.86
RTN3-204ENST00000354497 AQP12BA6NM10 295 aa9.69□□□□□ -0.86
RTN3-204ENST00000354497 M0R3G1 203 aa9.69□□□□□ -0.86
RTN3-204ENST00000354497 COPEO14579 308 aa9.69□□□□□ -0.86
RTN3-204ENST00000354497 EIF4E2O60573 245 aaKnown RBP9.69□□□□□ -0.86
RTN3-204ENST00000354497 SEC22BO75396 215 aa9.69□□□□□ -0.86
RTN3-204ENST00000354497 SNAPC5O75971 98 aa9.69□□□□□ -0.86
RTN3-204ENST00000354497 KRT33AO76009 404 aa9.69□□□□□ -0.86
RTN3-204ENST00000354497 IFNA4P05014 189 aa9.69□□□□□ -0.86
RTN3-204ENST00000354497 HMGN2P05204 90 aaKnown RBP9.69□□□□□ -0.86
RTN3-204ENST00000354497 NCF2P19878 526 aaPredicted RBP9.69□□□□□ -0.86
RTN3-204ENST00000354497 ZP3P21754 424 aa9.69□□□□□ -0.86
RTN3-204ENST00000354497 MAGEA12P43365 314 aa9.69□□□□□ -0.86
RTN3-204ENST00000354497 RAB13P51153 203 aa9.69□□□□□ -0.86
RTN3-204ENST00000354497 ATP12AP54707 1039 aa9.69□□□□□ -0.86
RTN3-204ENST00000354497 FOXA1P55317 472 aa9.69□□□□□ -0.86
RTN3-204ENST00000354497 PKNOX1P55347 436 aa9.69□□□□□ -0.86
RTN3-204ENST00000354497 UBE2NP61088 152 aaKnown RBP9.69□□□□□ -0.86
RTN3-204ENST00000354497 LCP2Q13094 533 aa9.69□□□□□ -0.86
RTN3-204ENST00000354497 EFNB3Q15768 340 aa9.69□□□□□ -0.86
RTN3-204ENST00000354497 ATP6AP1Q15904 470 aa9.69□□□□□ -0.86
RTN3-204ENST00000354497 GPAT3Q53EU6 434 aa9.69□□□□□ -0.86
RTN3-204ENST00000354497 ZCCHC12Q6PEW1 402 aa9.69□□□□□ -0.86
RTN3-204ENST00000354497 HACD2Q6Y1H2 254 aa9.69□□□□□ -0.86
RTN3-204ENST00000354497 UTS2BQ765I0 119 aa9.69□□□□□ -0.86
RTN3-204ENST00000354497 GDPD3Q7L5L3 318 aa9.69□□□□□ -0.86
RTN3-204ENST00000354497 NUDCD3Q8IVD9 361 aa9.69□□□□□ -0.86
RTN3-204ENST00000354497 AQP12AQ8IXF9 295 aa9.69□□□□□ -0.86
RTN3-204ENST00000354497 DHRSXQ8N5I4 330 aa9.69□□□□□ -0.86
RTN3-204ENST00000354497 ZNF781Q8N8C0 355 aa9.69□□□□□ -0.86
RTN3-204ENST00000354497 OR7A2PQ8NGA2 310 aa9.69□□□□□ -0.86
RTN3-204ENST00000354497 OR51F2Q8NH61 342 aa9.69□□□□□ -0.86
RTN3-204ENST00000354497 CLHC1Q8NHS4 586 aa9.69□□□□□ -0.86
RTN3-204ENST00000354497 ADAMTS15Q8TE58 950 aa9.69□□□□□ -0.86
RTN3-204ENST00000354497 SLC25A43Q8WUT9 341 aaPredicted RBP9.69□□□□□ -0.86
RTN3-204ENST00000354497 SGTBQ96EQ0 304 aa9.69□□□□□ -0.86
RTN3-204ENST00000354497 SLC6A7Q99884 636 aa9.69□□□□□ -0.86
RTN3-204ENST00000354497 FUNDC2Q9BWH2 189 aa9.69□□□□□ -0.86
RTN3-204ENST00000354497 SUCNR1Q9BXA5 334 aa9.69□□□□□ -0.86
RTN3-204ENST00000354497 PIGUQ9H490 435 aa9.69□□□□□ -0.86
RTN3-204ENST00000354497 OSGIN1Q9UJX0 560 aa9.69□□□□□ -0.86
RTN3-204ENST00000354497 LOC105371242A0A075B767 164 aa9.68□□□□□ -0.86
RTN3-204ENST00000354497 VSTM5A8MXK1 200 aa9.68□□□□□ -0.86
RTN3-204ENST00000354497 TRIM49D1C9J1S8 452 aa9.68□□□□□ -0.86
RTN3-204ENST00000354497 WRBO00258 174 aa9.68□□□□□ -0.86
RTN3-204ENST00000354497 SLC22A5O76082 557 aa9.68□□□□□ -0.86
RTN3-204ENST00000354497 MSMBP08118 114 aa9.68□□□□□ -0.86
RTN3-204ENST00000354497 ADRA2AP08913 450 aa9.68□□□□□ -0.86
RTN3-204ENST00000354497 MPGP29372 298 aa9.68□□□□□ -0.86
RTN3-204ENST00000354497 GPR6P46095 362 aaPredicted RBP9.68□□□□□ -0.86
RTN3-204ENST00000354497 IDH3AP50213 366 aa9.68□□□□□ -0.86
RTN3-204ENST00000354497 EPS8Q12929 822 aa9.68□□□□□ -0.86
RTN3-204ENST00000354497 TP53BP2Q13625 1128 aa9.68□□□□□ -0.86
RTN3-204ENST00000354497 CEACAM7Q14002 265 aa9.68□□□□□ -0.86
RTN3-204ENST00000354497 SPDYE7PQ495Y7 208 aa9.68□□□□□ -0.86
RTN3-204ENST00000354497 PDZK1Q5T2W1 519 aa9.68□□□□□ -0.86
RTN3-204ENST00000354497 HES5Q5TA89 166 aa9.68□□□□□ -0.86
RTN3-204ENST00000354497 TYW3Q6IPR3 259 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms